We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
HAUS4
  • TISSUE

  • premium

    CELL

  • CANCER

TISSUE ATLAS PRIMARY DATA SMALL INTESTINE

GENE/PROTEIN

Antibody validation


Dictionary

Small intestine

Tissue proteome

Small intestine

SMALL INTESTINE - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:33.5TPM
GTEx:15.4RPKM
FANTOM5:33.2Tags Per Million

SMALL INTESTINE - Annotated protein expression

Annotated protein
expression

Glandular cells:High
 

Antibody staining

Antibody HPA029803

 

Glandular cells

High  
 
 
 

SMALL INTESTINE - HPA RNA-seq

Average TPM

33.5

overview Male, age 65
Sample 1
TPM: 33.7
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 39
Sample 2
TPM: 35.2
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 68
Sample 3
TPM: 38.7
Cell types%
Glandular cells: 30
Smooth muscle cells: 15
Other cell types: 55
N/A Male, age 85
Sample 4
TPM: 26.4

SMALL INTESTINE - GTEx RNA-seq

Average RPKM

15.4

GTEx sample id

RPKM

 

Small Intestine - Terminal Ileum

Small Intestine - Terminal Ileum
RPKM: 15.4
Samples: 88

Max RPKM: 24.5
Min RPKM: 9.6
Std RPKM: 3.5
Median RPKM: 15
GTEX-11P7K-1626-SM-5GU63 24.5
GTEX-13O21-1026-SM-5IJDU 22.9
GTEX-13113-1226-SM-5EGHT 22.0
GTEX-ZC5H-2326-SM-4WAYT 21.9
GTEX-ZLFU-1526-SM-4WWBT 21.7
GTEX-139YR-2226-SM-5IFFW 21.2
GTEX-ZEX8-1826-SM-57WBH 20.9
GTEX-13O61-1326-SM-5KM31 20.6
GTEX-145ME-0926-SM-5O9AR 20.6
GTEX-WH7G-1626-SM-4LVMY 19.9
GTEX-131XG-1726-SM-5LZUR 19.9
GTEX-ZTPG-2626-SM-57WFX 19.8
GTEX-WFG8-1626-SM-4LVMB 19.5
GTEX-ZXES-1526-SM-5NQ95 19.3
GTEX-WFJO-0926-SM-4LVM2 19.2
GTEX-ZP4G-1626-SM-57WGD 19.2
GTEX-11NSD-1726-SM-5N9C3 19.1
GTEX-13PL7-2626-SM-5IFH4 19.1
GTEX-11DXZ-1326-SM-5H11X 18.6
GTEX-ZVP2-1726-SM-5GU5P 18.3
GTEX-XUZC-1426-SM-4BRV3 18.3
GTEX-11P82-0826-SM-5P9GU 18.2
GTEX-131XF-1326-SM-5GCMQ 18.1
GTEX-Y3IK-1726-SM-4YCCR 18.1
GTEX-11EQ9-1326-SM-5985X 17.9
GTEX-VJYA-0926-SM-4KL1N 17.6
GTEX-133LE-1426-SM-5IFH1 17.1
GTEX-11XUK-1426-SM-5EQMG 17.0
GTEX-XGQ4-1326-SM-4GIDU 16.9
GTEX-WFG7-1726-SM-4LVME 16.6
GTEX-Y5LM-1626-SM-4VDTB 16.6
GTEX-14E6E-1626-SM-5RQI7 16.5
GTEX-X15G-1426-SM-4PQZK 16.5
GTEX-1399R-2026-SM-5K7WN 16.5
GTEX-13RTK-0826-SM-5Q5C6 16.4
GTEX-ZYWO-1526-SM-5SIAL 16.4
GTEX-WRHK-1026-SM-4MVOD 16.1
GTEX-YB5E-1526-SM-5IFIE 16.0
GTEX-148VJ-2226-SM-5NQ9M 15.9
GTEX-1192X-2526-SM-59868 15.9
GTEX-Z9EW-0926-SM-5CVMM 15.8
GTEX-ZYFG-2026-SM-5E43Y 15.5
GTEX-UPK5-2026-SM-4JBIM 15.4
GTEX-12WSK-1526-SM-5CVNO 15.1
GTEX-ZLV1-1126-SM-4WWBW 14.9
GTEX-XAJ8-0526-SM-47JYK 14.9
GTEX-1399S-2026-SM-5KM4B 14.8
GTEX-ZZ64-0526-SM-5GZXM 14.8
GTEX-117YX-0326-SM-5GICL 14.7
GTEX-145LT-1026-SM-5LU9O 14.6
GTEX-ZQG8-2526-SM-57WEQ 14.6
GTEX-11VI4-1626-SM-5EQKO 14.3
GTEX-XXEK-1026-SM-4BRUW 14.2
GTEX-Y114-1426-SM-4TT6W 14.2
GTEX-111YS-1426-SM-5GID8 14.0
GTEX-VUSG-1726-SM-4KKZL 13.8
GTEX-1399U-2126-SM-5IFEZ 13.8
GTEX-13QBU-1926-SM-5IJEW 13.3
GTEX-ZA64-1226-SM-5HL7B 13.3
GTEX-ZPCL-1726-SM-57WEO 13.3
GTEX-139T6-1026-SM-5IJGC 13.1
GTEX-ZVT2-2126-SM-5NQ93 13.0
GTEX-XMK1-1826-SM-4B66F 12.9
GTEX-ZTX8-0526-SM-59HLD 12.9
GTEX-X5EB-1626-SM-4E3IV 12.7
GTEX-ZQUD-0926-SM-57WE3 12.5
GTEX-13FH7-1226-SM-5IJFK 12.5
GTEX-1122O-1326-SM-5H11F 12.4
GTEX-11I78-1126-SM-5A5K5 11.9
GTEX-ZPIC-2326-SM-57WDW 11.5
GTEX-111CU-1326-SM-5NQ8L 11.3
GTEX-ZF2S-1726-SM-57WFT 11.3
GTEX-11DXX-1626-SM-5H11H 11.2
GTEX-WEY5-1526-SM-4LMJF 11.1
GTEX-YEC4-1726-SM-4W21E 11.1
GTEX-13OVI-1926-SM-5IJCG 11.0
GTEX-13CF3-1226-SM-5LZXN 10.9
GTEX-XBED-1426-SM-4AT4G 10.8
GTEX-13D11-0726-SM-5LZZB 10.7
GTEX-ZTSS-0926-SM-59865 10.6
GTEX-12BJ1-1926-SM-5HL9Z 10.5
GTEX-13FTW-2026-SM-5IJE2 10.4
GTEX-WQUQ-2426-SM-4MVNW 10.3
GTEX-14DAR-1426-SM-5RQIR 10.1
GTEX-13111-1426-SM-5DUW3 10.0
GTEX-Y9LG-1626-SM-5IFHM 10.0
GTEX-ZVZP-1826-SM-5GZXB 9.8
GTEX-YF7O-1826-SM-5IFIU 9.6
Show all

SMALL INTESTINE - FANTOM5 CAGE

Average Tags Per Million

33.2

FANTOM5 sample id

Sample description

Tags Per Million

Small intestine
Tags Per Million: 33.2
FF:10024-101D6 15,40,85 years, mixed 33.2

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.