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SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:47.8TPM
GTEx:34.6RPKM
FANTOM5:28.6Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Chondrocytes:Not detected
Fibroblasts:Not detected
Peripheral nerve:Not detected
 
 
 
 

Antibody staining

Antibody HPA021616

  

Antibody CAB004035

  

Antibody CAB047324

  

Adipocytes

 Not detected   Not detected   Not detected  

Chondrocytes

 Not detected  

Fibroblasts

 Not detected   Not detected  

Peripheral nerve

 Not detected   Medium  
        
        
        
     
     
     

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Fibroblasts:Not detected
Peripheral nerve:Not detected
Chondrocytes:Not detected
 
 

Antibody staining

Antibody HPA021616

  

Antibody CAB004035

  

Antibody CAB047324

  

Adipocytes

 Not detected   Not detected   Not detected  

Fibroblasts

 Not detected   Not detected   Not detected  

Peripheral nerve

 Not detected   Low  

Chondrocytes

 Not detected  
        
     
     
     

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

47.8
N/A Female, age 80
Sample 1
TPM: 32.8
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45
Sample 2
TPM: 29.3
N/A Female, age 57
Sample 3
TPM: 30.4
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74
Sample 4
TPM: 56.3
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59
Sample 5
TPM: 90.4
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

34.6

GTEx sample id

RPKM
 

Adipose - Subcutaneous
Adipose - Subcutaneous
RPKM: 19.7
Samples: 350

Max RPKM: 44
Min RPKM: 7.4
Std RPKM: 5.7
Median RPKM: 18.7
GTEX-14C5O-0226-SM-5SI6O 44.0
GTEX-13OW6-0526-SM-5L3HY 41.5
GTEX-NFK9-0326-SM-3MJGV 40.5
GTEX-OHPM-0226-SM-3LK61 40.5
GTEX-ZDYS-2126-SM-5S2OD 39.3
GTEX-P4QT-0226-SM-3LK68 37.8
GTEX-YECK-0226-SM-4W215 36.7
GTEX-ZTSS-2026-SM-5987K 36.6
Show all
 

Adipose - Visceral (Omentum)
Adipose - Visceral (Omentum)
RPKM: 57.5
Samples: 227

Max RPKM: 285.5
Min RPKM: 7.9
Std RPKM: 42.6
Median RPKM: 44.2
GTEX-12WSC-1726-SM-5GCN3 285.5
GTEX-WFON-1226-SM-3TW8F 237.1
GTEX-13N1W-1226-SM-5K7UM 204.4
GTEX-139TU-1426-SM-5LZY9 194.9
GTEX-XLM4-1026-SM-4AT51 173.9
GTEX-11NV4-1426-SM-5BC4W 161.8
GTEX-XOT4-0826-SM-4B66Y 152.8
GTEX-ZG7Y-1626-SM-5S2NO 136.8
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

28.6

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 28.6
FF:10010-101C1 65,65,76 years, mixed 28.6

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.