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TISSUE ATLAS PRIMARY DATA CEREBRAL CORTEX

GENE/PROTEIN

Antibody validation


Dictionary

Cerebral cortex

Tissue proteome

Brain
Extended brain samples

CEREBRAL CORTEX - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:112.9TPM
GTEx:37.7RPKM

CEREBRAL CORTEX - Annotated protein expression

Annotated protein
expression

Endothelial cells:Medium
Glial cells:Medium
Neuronal cells:Not detected
Neuropil:Low
 

Antibody staining

Antibody HPA021616

 

Antibody CAB004035

 

Antibody CAB047324

 

Endothelial cells

Medium   Medium   Low  

Glial cells

Medium   Medium   Medium  

Neuronal cells

Not detected   Not detected   Not detected  

Neuropil

Low   Low   Low  
     
     
     

CEREBRAL CORTEX - HPA RNA-seq

Average TPM

112.9

N/A Male, age 5
Sample 1
TPM: 143.6
overview Female, age 40
Sample 2
TPM: 134.3
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65
overview Male, age 70
Sample 3
TPM: 60.9
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM

37.7

GTEx sample id

RPKM

 

Brain - Cortex

Brain - Cortex
RPKM: 39.1
Samples: 114

Max RPKM: 87.5
Min RPKM: 2.1
Std RPKM: 15.9
Median RPKM: 36.6
GTEX-13IVO-2926-SM-5L3CZ 87.5
GTEX-11GSP-3226-SM-5986O 84.3
GTEX-144FL-3026-SM-5O99C 75.0
GTEX-ZE7O-3126-SM-5HL5X 71.0
GTEX-131XW-3126-SM-5LZUC 70.4
GTEX-13OW7-3026-SM-5L3GY 70.3
GTEX-12WSD-3126-SM-5HL7P 64.7
GTEX-PWO3-0926-SM-2I5EY 63.8
GTEX-RU72-3026-SM-5SI7Y 63.3
GTEX-13JVG-3126-SM-5L3FH 62.7
GTEX-139T8-1026-SM-5J2MC 61.6
GTEX-12ZZW-2926-SM-5LZUP 60.7
GTEX-11EI6-3026-SM-5GZZO 59.0
GTEX-13X6K-2926-SM-5Q5D5 58.4
GTEX-13OVJ-2826-SM-5L3GW 58.3
GTEX-13QIC-2926-SM-5J2NF 57.8
GTEX-1445S-3026-SM-5O9BR 57.2
GTEX-11NUK-2926-SM-5A5MD 56.2
GTEX-11TTK-2926-SM-5PNYP 55.3
GTEX-ZVT3-3026-SM-5E43N 55.0
GTEX-11OC5-0726-SM-5P9JK 54.8
GTEX-13JUV-2926-SM-5LZX7 54.2
GTEX-12WSA-2926-SM-5EQ4D 52.9
GTEX-13S7M-3126-SM-5RQJQ 52.9
GTEX-11GSO-2926-SM-5HL73 52.8
GTEX-X4XX-3026-SM-3NMB2 51.9
GTEX-1399T-3026-SM-5KLZC 51.8
GTEX-11EMC-3226-SM-5EGKW 51.6
GTEX-144GL-3026-SM-5Q5CW 50.3
GTEX-12ZZZ-3026-SM-5BC67 50.1
GTEX-13PL6-3126-SM-5LUAR 49.8
GTEX-11WQK-3026-SM-5EQL6 46.3
GTEX-13OW6-3026-SM-5J2MI 45.9
GTEX-1128S-2726-SM-5H12C 44.8
GTEX-ZAK1-3026-SM-5S2MJ 44.4
GTEX-QVJO-1426-SM-2S1QY 44.1
GTEX-ZZPT-3026-SM-5GZXH 44.1
GTEX-145MF-2726-SM-5O995 43.9
GTEX-145MG-3026-SM-5RQJA 43.9
GTEX-QVUS-2826-SM-3GADB 43.8
GTEX-OXRN-2426-SM-2I5EQ 43.4
GTEX-13X6J-3026-SM-5Q5CU 42.7
GTEX-11DXW-1126-SM-5H12Q 41.6
GTEX-Y111-2726-SM-4TT3N 41.3
GTEX-147GR-3026-SM-5S2ML 41.2
GTEX-XLM4-3026-SM-4AT6L 40.7
GTEX-14BMV-3026-SM-5S2PQ 40.2
GTEX-YJ89-3026-SM-5IFJI 40.2
GTEX-1192X-3126-SM-5N9BY 39.9
GTEX-11PRG-2926-SM-5987A 39.6
GTEX-QMR6-1426-SM-32PLA 39.6
GTEX-11ONC-2926-SM-5P9JM 39.5
GTEX-13PVQ-3026-SM-5SI93 39.1
GTEX-13O3O-3126-SM-5KM3H 39.0
GTEX-Y8DK-0826-SM-4TT3T 38.0
GTEX-13OW8-2826-SM-5L3GC 37.9
GTEX-11DXY-3226-SM-5GIDE 37.1
GTEX-13NYS-3126-SM-5KLYV 36.1
GTEX-11NV4-2126-SM-5N9DS 36.0
GTEX-14A5I-2926-SM-5Q5CQ 35.9
GTEX-11GS4-3126-SM-5A5LH 35.1
GTEX-R55F-1326-SM-5S2V4 34.6
GTEX-13NYC-2826-SM-5K7WR 34.5
GTEX-132Q8-3026-SM-5PNVG 34.1
GTEX-QDT8-2926-SM-32PKC 34.0
GTEX-ZUA1-3026-SM-59HJC 33.5
GTEX-12WSH-3026-SM-5CVNI 33.4
GTEX-X585-3026-SM-46MWF 33.3
GTEX-145LS-3126-SM-5Q5BY 33.1
GTEX-Q2AG-2926-SM-2HMJ3 32.3
GTEX-12ZZX-2926-SM-5GCOQ 32.2
GTEX-13O3Q-2926-SM-5KM45 32.2
GTEX-WZTO-2926-SM-3NM9I 32.0
GTEX-13NYB-3026-SM-5IJD7 31.6
GTEX-131YS-3126-SM-5KLYT 31.2
GTEX-WHSE-3026-SM-3P5ZH 30.8
GTEX-14ASI-3026-SM-5S2PN 30.1
GTEX-12ZZY-3026-SM-5GCOU 29.9
GTEX-WWYW-3126-SM-3NB39 29.9
GTEX-XOTO-3026-SM-4B65M 29.6
GTEX-TSE9-3026-SM-3DB76 29.2
GTEX-13OVH-3026-SM-5MR4N 28.9
GTEX-111FC-3126-SM-5GZZ2 28.8
GTEX-13FXS-3126-SM-5J2NN 28.6
GTEX-YFC4-3126-SM-5PNV6 28.6
GTEX-12WSC-3026-SM-5GCNF 28.2
GTEX-13FHP-3026-SM-5IJBS 28.0
GTEX-1117F-3226-SM-5N9CT 27.9
GTEX-12126-1026-SM-5P9JJ 27.7
GTEX-NPJ8-1526-SM-2D7VU 27.5
GTEX-NPJ7-2726-SM-2I3FT 25.4
GTEX-145MH-3026-SM-5Q5DZ 25.3
GTEX-13VXU-2926-SM-5LU5C 25.2
GTEX-13FHO-3026-SM-5J1O9 25.1
GTEX-UTHO-3026-SM-3GAFB 25.1
GTEX-RNOR-2326-SM-2TF4I 24.3
GTEX-13FLW-1426-SM-5K7YE 24.1
GTEX-ZYFD-3026-SM-5E44C 24.1
GTEX-11O72-2926-SM-5BC4V 23.9
GTEX-117XS-3026-SM-5N9CA 23.1
GTEX-13G51-3026-SM-5IJB8 22.5
GTEX-13SLX-3126-SM-5S2Q5 21.8
GTEX-T6MN-2626-SM-32PMQ 21.8
GTEX-WVLH-3026-SM-3MJG9 21.2
GTEX-T5JC-2426-SM-3NMDB 19.3
GTEX-1313W-3126-SM-5LZUI 19.0
GTEX-T2IS-3026-SM-32QPM 18.7
GTEX-N7MT-1126-SM-5SI7V 17.6
GTEX-11ZUS-2926-SM-5FQSL 15.1
GTEX-Z93S-2926-SM-57WB9 13.9
GTEX-ZAJG-3126-SM-5HL9J 11.5
GTEX-PVOW-2526-SM-2XCF7 10.5
GTEX-WL46-2926-SM-3LK82 9.3
GTEX-11OF3-2926-SM-5HL78 2.1
Show all
 

Brain - Frontal Cortex (BA9)

Brain - Frontal Cortex (BA9)
RPKM: 36.2
Samples: 108

Max RPKM: 97.2
Min RPKM: 5.5
Std RPKM: 17.8
Median RPKM: 32.4
GTEX-13OVJ-0011-R10b-SM-5L3HT 97.2
GTEX-13SLW-0011-R10a-SM-5S2UI 85.9
GTEX-1445S-0011-R10a-SM-5PNWB 80.3
GTEX-1477Z-0011-R10b-SM-5S2RF 77.1
GTEX-11GSP-0011-R10a-SM-5NQ7J 76.6
GTEX-11WQC-0011-R10a-SM-57WCT 72.4
GTEX-13FLV-0011-R10b-SM-5LZZ2 68.6
GTEX-139TS-0011-R10a-SM-5K7TU 67.5
GTEX-13OW8-0011-R10a-SM-5L3H6 66.9
GTEX-13JUV-0011-R10b-SM-5LZXR 66.3
GTEX-12WSD-0011-R10b-SM-5GU79 66.1
GTEX-12WSA-0011-R10b-SM-5P9ET 61.5
GTEX-14753-0011-R10b-SM-5S2WE 59.7
GTEX-131XW-0011-R10a-SM-5DUVA 58.5
GTEX-145LU-0011-R10a-SM-5PNWJ 55.2
GTEX-147F4-0011-R10b-SM-5S2WC 55.0
GTEX-ZV68-0011-R10a-SM-51MT7 52.9
GTEX-13OW6-0011-R10a-SM-5L3HE 52.7
GTEX-13N2G-0011-R10a-SM-5MR34 50.2
GTEX-12ZZW-0011-R10b-SM-5HL9X 49.7
GTEX-13JVG-0011-R10b-SM-5KM2P 47.3
GTEX-TSE9-0011-R10A-SM-3DB7O 46.9
GTEX-QVUS-0011-R10A-SM-3GIK3 46.8
GTEX-13OVL-0011-R10a-SM-5L3GS 46.2
GTEX-13FXS-0011-R10a-SM-5J2MA 45.0
GTEX-P44H-0011-R10A-SM-2XCEK 44.7
GTEX-ZDXO-0011-R10a-SM-4WWD8 44.6
GTEX-13QJC-0011-R10a-SM-5SI63 44.2
GTEX-12ZZY-0011-R10b-SM-5HL7W 43.8
GTEX-NL4W-0011-R10A-SM-2I3DY 43.4
GTEX-11H98-0011-R10b-SM-5NQ98 43.3
GTEX-13FTZ-0011-R10b-SM-5KLZS 43.3
GTEX-QMR6-0011-R10A-SM-32PKO 42.8
GTEX-ZAB4-0011-R10a-SM-4SOKH 42.2
GTEX-XLM4-0011-R10A-SM-4AT5P 42.1
GTEX-OXRO-0011-R10A-SM-2I5EH 42.0
GTEX-11WQK-0011-R10a-SM-5BC6R 41.7
GTEX-13IVO-0011-R10a-SM-5LZY3 40.2
GTEX-13X6I-0011-R10a-SM-5PNWI 40.1
GTEX-13NZA-0011-R10b-SM-5KM54 40.0
GTEX-ZVT3-0011-R10b-SM-57WB6 39.6
GTEX-X4EP-0011-R10B-SM-4QASJ 38.5
GTEX-13X6K-0011-R10a-SM-5P9JR 37.6
GTEX-X4XX-0011-R10B-SM-46MWO 37.6
GTEX-13O3O-0011-R10a-SM-5LUA9 37.1
GTEX-147GR-0011-R10b-SM-5S2UM 37.0
GTEX-12126-0011-R10b-SM-5BC6T 36.1
GTEX-ZUA1-0011-R10a-SM-51MT6 36.1
GTEX-14BIL-0011-R10a-SM-5SI75 35.9
GTEX-X261-0011-R10B-SM-4E3JT 34.6
GTEX-OXRN-0011-R10A-SM-2I5GC 34.5
GTEX-12WSM-0011-R10a-SM-5DUWV 33.9
GTEX-ZXG5-0011-R10a-SM-57WDD 32.7
GTEX-13FHO-0011-R10b-SM-5J2MM 32.6
GTEX-145MG-0011-R10a-SM-5PNWG 32.2
GTEX-RVPU-0011-R10A-SM-2XCAH 32.1
GTEX-13NYB-0011-R10a-SM-5KM43 31.7
GTEX-NPJ8-0011-R10A-SM-2YUMO 31.6
GTEX-13QIC-0011-R10a-SM-5O9C7 31.3
GTEX-13NYS-0011-R10a-SM-5MR4S 30.8
GTEX-YJ89-0011-R10a-SM-4SOK9 30.8
GTEX-13S7M-0011-R10b-SM-5PNZB 30.7
GTEX-13G51-0011-R10b-SM-5LZYF 29.9
GTEX-QDT8-0011-R10A-SM-32PKG 29.8
GTEX-ZVZQ-0011-R10b-SM-51MRT 29.2
GTEX-131XH-0011-R10a-SM-5EGLJ 28.9
GTEX-ZF28-0011-R10a-SM-4WWEH 28.5
GTEX-XMD1-0011-R10A-SM-4AT4A 27.5
GTEX-T5JC-0011-R10A-SM-32PM2 27.3
GTEX-13OW7-0011-R10a-SM-5L3H3 27.0
GTEX-11ZUS-0011-R10b-SM-5BC79 26.7
GTEX-12ZZZ-0011-R10a-SM-5P9HC 26.5
GTEX-12WSH-0011-R10a-SM-5LZUS 26.3
GTEX-NPJ7-0011-R10A-SM-2I3E5 26.1
GTEX-14ASI-0011-R10b-SM-5S2VZ 25.2
GTEX-QVJO-0011-R10A-SM-2S1QJ 24.8
GTEX-132Q8-0011-R10b-SM-5DUWZ 24.5
GTEX-145LS-0011-R10a-SM-5PNUQ 24.5
GTEX-WWYW-0011-R10A-SM-3NB35 23.8
GTEX-N7MT-0011-R10A-SM-2I3E1 22.8
GTEX-Q2AG-0011-R10A-SM-2HMLA 22.4
GTEX-13CZV-0011-R10b-SM-5LZYD 22.1
GTEX-ZE7O-0011-R10a-SM-57WAZ 22.0
GTEX-13O3Q-0011-R10b-SM-5KM39 21.8
GTEX-13X6J-0011-R10b-SM-5PNWA 21.5
GTEX-12WSF-0011-R10a-SM-5LZVH 21.4
GTEX-13RTJ-0011-R10b-SM-5O9CW 21.3
GTEX-131YS-0011-R10b-SM-5EQ5N 21.2
GTEX-13N1W-0011-R10b-SM-5MR4H 21.2
GTEX-12ZZX-0011-R10b-SM-5DUWK 20.9
GTEX-Y8DK-0011-R10A-SM-4SOK1 20.6
GTEX-YFC4-0011-R10a-SM-4SOK5 20.6
GTEX-S7SE-0011-R10A-SM-2XCDF 20.1
GTEX-14BIN-0011-R10a-SM-5S2UA 19.7
GTEX-N7MS-0011-R10A-SM-2HMJK 19.3
GTEX-Z93S-0011-R10a-SM-4RGNM 19.0
GTEX-WZTO-0011-R10B-SM-4E3KB 17.6
GTEX-13FLW-0011-R10b-SM-5LZZF 16.7
GTEX-13SLX-0011-R10a-SM-5P9HV 16.3
GTEX-NL3H-0011-R10A-SM-2I3E9 15.3
GTEX-WVLH-0011-R10A-SM-3MJFM 14.7
GTEX-T6MN-0011-R10A-SM-32QP7 12.8
GTEX-145MH-0011-R10b-SM-5PNUK 11.7
GTEX-12WSC-0011-R10a-SM-5GU57 11.5
GTEX-X585-0011-R10A-SM-46MUY 11.3
GTEX-12WSE-0011-R10b-SM-5P9JV 11.1
GTEX-1313W-0011-R10b-SM-5DUXA 9.0
GTEX-WL46-0011-R10A-SM-3MJFQ 5.5
Show all

CEREBRAL CORTEX - FANTOM5 CAGE

No Fantom CAGE analysis found for this gene / tissue

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