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TISSUE ATLAS PRIMARY DATA SMALL INTESTINE

GENE/PROTEIN

Antibody validation


Dictionary

Small intestine

Tissue proteome

Small intestine

SMALL INTESTINE - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:289.5TPM
GTEx:148.5RPKM
FANTOM5:481.9Tags Per Million

SMALL INTESTINE - Annotated protein expression

Annotated protein
expression

Glandular cells:High
 

Antibody staining

Antibody HPA021616

 

Antibody CAB004035

 

Antibody CAB047324

 

Glandular cells

High   Medium   High  
     
     
     

SMALL INTESTINE - HPA RNA-seq

Average TPM

289.5

overview Male, age 65
Sample 1
TPM: 214.0
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 39
Sample 2
TPM: 346.1
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 68
Sample 3
TPM: 261.5
Cell types%
Glandular cells: 30
Smooth muscle cells: 15
Other cell types: 55
N/A Male, age 85
Sample 4
TPM: 336.6

SMALL INTESTINE - GTEx RNA-seq

Average RPKM

148.5

GTEx sample id

RPKM

 

Small Intestine - Terminal Ileum

Small Intestine - Terminal Ileum
RPKM: 148.5
Samples: 88

Max RPKM: 329.5
Min RPKM: 17.7
Std RPKM: 77.5
Median RPKM: 146.4
GTEX-Y9LG-1626-SM-5IFHM 329.5
GTEX-ZTSS-0926-SM-59865 324.4
GTEX-111YS-1426-SM-5GID8 300.3
GTEX-YEC4-1726-SM-4W21E 286.6
GTEX-13D11-0726-SM-5LZZB 274.6
GTEX-1122O-1326-SM-5H11F 268.8
GTEX-13O61-1326-SM-5KM31 264.4
GTEX-14DAR-1426-SM-5RQIR 261.5
GTEX-ZPCL-1726-SM-57WEO 260.4
GTEX-13PL7-2626-SM-5IFH4 257.3
GTEX-145LT-1026-SM-5LU9O 246.9
GTEX-ZTX8-0526-SM-59HLD 240.3
GTEX-YF7O-1826-SM-5IFIU 237.0
GTEX-1399S-2026-SM-5KM4B 236.8
GTEX-ZVP2-1726-SM-5GU5P 233.2
GTEX-ZLV1-1126-SM-4WWBW 231.4
GTEX-YB5E-1526-SM-5IFIE 223.6
GTEX-11EQ9-1326-SM-5985X 222.1
GTEX-ZVZP-1826-SM-5GZXB 215.2
GTEX-13FTW-2026-SM-5IJE2 210.7
GTEX-XBED-1426-SM-4AT4G 209.4
GTEX-11I78-1126-SM-5A5K5 207.3
GTEX-131XF-1326-SM-5GCMQ 206.9
GTEX-11DXX-1626-SM-5H11H 203.5
GTEX-14E6E-1626-SM-5RQI7 203.0
GTEX-ZLFU-1526-SM-4WWBT 201.3
GTEX-ZXES-1526-SM-5NQ95 200.9
GTEX-11P7K-1626-SM-5GU63 198.8
GTEX-ZZ64-0526-SM-5GZXM 193.0
GTEX-WH7G-1626-SM-4LVMY 184.7
GTEX-1399U-2126-SM-5IFEZ 180.2
GTEX-12BJ1-1926-SM-5HL9Z 175.5
GTEX-13FH7-1226-SM-5IJFK 173.6
GTEX-XUZC-1426-SM-4BRV3 169.6
GTEX-ZYFG-2026-SM-5E43Y 168.8
GTEX-11P82-0826-SM-5P9GU 168.2
GTEX-Y114-1426-SM-4TT6W 161.7
GTEX-131XG-1726-SM-5LZUR 161.5
GTEX-WFJO-0926-SM-4LVM2 160.4
GTEX-13113-1226-SM-5EGHT 157.8
GTEX-11XUK-1426-SM-5EQMG 156.3
GTEX-ZA64-1226-SM-5HL7B 154.3
GTEX-11VI4-1626-SM-5EQKO 153.7
GTEX-139T6-1026-SM-5IJGC 150.2
GTEX-ZVT2-2126-SM-5NQ93 142.7
GTEX-13CF3-1226-SM-5LZXN 142.3
GTEX-X5EB-1626-SM-4E3IV 140.8
GTEX-11DXZ-1326-SM-5H11X 138.2
GTEX-XGQ4-1326-SM-4GIDU 134.8
GTEX-WRHK-1026-SM-4MVOD 124.3
GTEX-1399R-2026-SM-5K7WN 122.4
GTEX-ZEX8-1826-SM-57WBH 119.7
GTEX-ZYWO-1526-SM-5SIAL 119.1
GTEX-WQUQ-2426-SM-4MVNW 119.1
GTEX-11NSD-1726-SM-5N9C3 112.9
GTEX-148VJ-2226-SM-5NQ9M 101.5
GTEX-Z9EW-0926-SM-5CVMM 101.2
GTEX-XXEK-1026-SM-4BRUW 100.5
GTEX-139YR-2226-SM-5IFFW 99.6
GTEX-ZP4G-1626-SM-57WGD 98.3
GTEX-133LE-1426-SM-5IFH1 97.9
GTEX-XAJ8-0526-SM-47JYK 91.8
GTEX-VUSG-1726-SM-4KKZL 89.6
GTEX-12WSK-1526-SM-5CVNO 88.4
GTEX-X15G-1426-SM-4PQZK 86.9
GTEX-13QBU-1926-SM-5IJEW 82.9
GTEX-ZPIC-2326-SM-57WDW 82.6
GTEX-ZTPG-2626-SM-57WFX 81.3
GTEX-WFG7-1726-SM-4LVME 81.0
GTEX-145ME-0926-SM-5O9AR 80.4
GTEX-13RTK-0826-SM-5Q5C6 77.9
GTEX-WEY5-1526-SM-4LMJF 70.6
GTEX-WFG8-1626-SM-4LVMB 64.8
GTEX-VJYA-0926-SM-4KL1N 60.3
GTEX-13O21-1026-SM-5IJDU 57.7
GTEX-ZQUD-0926-SM-57WE3 56.8
GTEX-ZC5H-2326-SM-4WAYT 55.9
GTEX-UPK5-2026-SM-4JBIM 55.7
GTEX-Y3IK-1726-SM-4YCCR 54.8
GTEX-117YX-0326-SM-5GICL 51.6
GTEX-111CU-1326-SM-5NQ8L 42.3
GTEX-ZQG8-2526-SM-57WEQ 40.2
GTEX-Y5LM-1626-SM-4VDTB 37.3
GTEX-ZF2S-1726-SM-57WFT 33.0
GTEX-13OVI-1926-SM-5IJCG 32.7
GTEX-13111-1426-SM-5DUW3 27.7
GTEX-1192X-2526-SM-59868 25.6
GTEX-XMK1-1826-SM-4B66F 17.7
Show all

SMALL INTESTINE - FANTOM5 CAGE

Average Tags Per Million

481.9

FANTOM5 sample id

Sample description

Tags Per Million

Small intestine
Tags Per Million: 481.9
FF:10024-101D6 15,40,85 years, mixed 481.9

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