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HDAC6

SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:19.6TPM
GTEx:13.6RPKM
FANTOM5:12.7Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Chondrocytes:Not detected
Fibroblasts:Not detected
Peripheral nerve:Not detected
 

Antibody staining

Antibody HPA003714

  

Antibody HPA026321

  

Antibody CAB004236

  

Adipocytes

 Not detected   Not detected   Not detected  

Chondrocytes

 Medium   Not detected  

Fibroblasts

 Not detected   Not detected   Not detected  

Peripheral nerve

 Not detected   Not detected   Not detected  
     
     
     

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Fibroblasts:Not detected
Peripheral nerve:Not available
 
 
 

Antibody staining

Antibody HPA003714

  

Antibody HPA026321

  

Antibody CAB004236

  

Adipocytes

 Not detected   Not detected   Not detected  

Fibroblasts

 Not detected   Not detected   Not detected  

Peripheral nerve

 Not detected   Not detected  
        
        
     
     
     

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

19.6
N/A Female, age 80
Sample 1
TPM: 20.6
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45
Sample 2
TPM: 20.3
N/A Female, age 57
Sample 3
TPM: 15.6
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74
Sample 4
TPM: 18.9
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59
Sample 5
TPM: 22.7
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

13.6

GTEx sample id

RPKM
 

Adipose - Subcutaneous
Adipose - Subcutaneous
RPKM: 13.7
Samples: 350

Max RPKM: 22.3
Min RPKM: 5.5
Std RPKM: 2.4
Median RPKM: 13.8
GTEX-11EQ8-0226-SM-5EQ5G 22.3
GTEX-YJ8O-2426-SM-5HL7S 20.9
GTEX-XGQ4-2226-SM-4AT4Y 20.7
GTEX-W5WG-2526-SM-4SOJ2 20.0
GTEX-13NZ8-0926-SM-5MR3U 19.8
GTEX-X638-0226-SM-47JZ9 19.5
GTEX-S33H-1126-SM-2XCB6 19.1
GTEX-11WQC-2426-SM-5EQKQ 18.6
Show all
 

Adipose - Visceral (Omentum)
Adipose - Visceral (Omentum)
RPKM: 13.5
Samples: 227

Max RPKM: 24.8
Min RPKM: 6.3
Std RPKM: 3.4
Median RPKM: 12.9
GTEX-13S7M-0826-SM-5QGQX 24.8
GTEX-131YS-1726-SM-5HL7G 23.8
GTEX-14A6H-1026-SM-5SIAZ 23.7
GTEX-12WSC-1726-SM-5GCN3 22.2
GTEX-14DAQ-2526-SM-5RQIO 22.1
GTEX-ZYT6-2126-SM-5GZZ4 20.4
GTEX-13NZ9-2026-SM-5KM1U 20.3
GTEX-ZDTS-1826-SM-5S2N6 20.3
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

12.7

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 12.7
FF:10010-101C1 65,65,76 years, mixed 12.7

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.