Tissue expression of HDAC6 - Staining in liver

LIVER - Expression summary

Protein expression

RNA expression

HPA:	22.5	TPM
GTEx:	27.4	RPKM
FANTOM5:	37.5	Tags Per Million

LIVER - Annotated protein expression

Annotated protein
expression

Bile duct cells:	Low
Hepatocytes:	Low

Antibody staining	Antibody HPA003714	Antibody HPA026321	Antibody CAB004236
Bile duct cells	Not detected	Not detected	Low
Hepatocytes	Low	Medium	Low

LIVER - HPA RNA-seq

Average TPM	22.5

Female, age 60

Sample 1
TPM: 22.2

Male, age 54

Sample 2
TPM: 23.8

Cell types%

Hepatocytes: 80
Fibroblasts: 15
Other cell types: 5

Male, age 74

Sample 3
TPM: 21.1

Cell types%

Hepatocytes: 85
Fibroblasts: 5
Other cell types: 10

Female, age 62

Sample 4
TPM: 14.9

Cell types%

Hepatocytes: 70
Fibroblasts: 10
Other cell types: 20

Male, age 78

Sample 5
TPM: 15.8

Cell types%

Hepatocytes: 75
Fibroblasts: 5
Other cell types: 20

Male, age 53

Sample 6
TPM: 31.9

Cell types%

Hepatocytes: 80
Fibroblasts: 5
Other cell types: 15

Male, age 77

Sample 7
TPM: 33.1

Cell types%

Hepatocytes: 75
Fibroblasts: 5
Other cell types: 20

Female, age 72

Sample 8
TPM: 16.6

Cell types%

Hepatocytes: 50
Fibroblasts: 10
Other cell types: 40

Male, age 70

Sample 9
TPM: 15.4

Cell types%

Hepatocytes: 65
Fibroblasts: 10
Other cell types: 25

Female, age 23

Sample 10
TPM: 29.7

Cell types%

Hepatocytes: 70
Fibroblasts: 5
Other cell types: 25

LIVER - GTEx RNA-seq

Average RPKM	27.4

GTEx sample id

RPKM

Liver

Liver
RPKM: 27.4

Samples: 119

Max RPKM: 56.6
Min RPKM: 10.1
Std RPKM: 10.9
Median RPKM: 25

GTEX-13OW6-2626-SM-5IFF2

56.6

GTEX-X4EP-1026-SM-4QAS5

56.3

GTEX-11GSP-0626-SM-5986T

52.8

GTEX-RN64-1826-SM-48FDV

52.8

GTEX-ZAB4-0826-SM-5LU9D

50.3

GTEX-WZTO-0626-SM-4PQYY

49.4

GTEX-XBEC-1526-SM-4AT68

49.0

GTEX-11ZTS-1426-SM-5EQMM

48.6

Show all

LIVER - FANTOM5 CAGE

Average Tags Per Million	37.5

FANTOM5 sample id

Sample description

Tags Per Million

Liver
Tags Per Million: 37.5

FF:10018-101C9

64,69,70 years, mixed

37.5