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HDAC6
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TISSUE ATLAS PRIMARY DATA SPLEEN

GENE/PROTEIN

Antibody validation


Dictionary

Spleen

Tissue proteome

Spleen

SPLEEN - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:24.6TPM
GTEx:21.3RPKM
FANTOM5:14.0Tags Per Million

SPLEEN - Annotated protein expression

Annotated protein
expression

Cells in red pulp:Low
Cells in white pulp:Low
 

Antibody staining

Antibody HPA003714

 

Antibody HPA026321

 

Antibody CAB004236

 

Cells in red pulp

Not detected   Not detected   Low  

Cells in white pulp

Not detected   Low   Low  
     
     
     

SPLEEN - HPA RNA-seq

Average TPM

24.6

overview Female, age 60
Sample 1
TPM: 28.1
Cell types%
Lymphocytes: 40
Macrophages: 30
Endothelial cells: 15
Fibroblasts: 5
Other cell types: 10
overview Male, age 17
Sample 2
TPM: 24.2
Cell types%
Lymphocytes: 40
Macrophages: 35
Endothelial cells: 15
Fibroblasts: 5
Other cell types: 5
overview Male, age 20
Sample 3
TPM: 20.0
Cell types%
Lymphocytes: 40
Macrophages: 30
Endothelial cells: 15
Fibroblasts: 5
Other cell types: 10
overview Female, age 19
Sample 4
TPM: 26.0
Cell types%
Lymphocytes: 40
Macrophages: 30
Endothelial cells: 15
Fibroblasts: 10
Other cell types: 5
overview Female, age 65
Sample 5
TPM: 24.6
Cell types%
Lymphocytes: 35
Macrophages: 30
Endothelial cells: 20
Fibroblasts: 10
Other cell types: 5

SPLEEN - GTEx RNA-seq

Average RPKM

21.3

GTEx sample id

RPKM

 

Spleen

Spleen
RPKM: 21.3
Samples: 104

Max RPKM: 34.2
Min RPKM: 13.8
Std RPKM: 2.9
Median RPKM: 21
GTEX-UPK5-1626-SM-4JBHI 34.2
GTEX-X585-1826-SM-4QAS3 30.0
GTEX-X3Y1-0126-SM-4PQZA 28.3
GTEX-OOBJ-0926-SM-48TDO 28.0
GTEX-XQ8I-1726-SM-4BOQB 27.7
GTEX-XUJ4-0226-SM-4BOP8 27.0
GTEX-Z9EW-0726-SM-5HL9H 27.0
GTEX-13VXT-1326-SM-5LU3Y 25.6
GTEX-XGQ4-0126-SM-4AT4H 25.1
GTEX-QLQW-0126-SM-447BK 25.0
GTEX-P4QS-0926-SM-48TBS 24.4
GTEX-1399R-0226-SM-5IJGG 24.3
GTEX-12WSG-0926-SM-5EGIH 24.2
GTEX-12WSJ-0526-SM-5GCOZ 23.9
GTEX-QDVN-0526-SM-48TZ4 23.8
GTEX-X4LF-0226-SM-4QAS8 23.8
GTEX-11NSD-0426-SM-5N9CR 23.7
GTEX-WFON-0126-SM-4LVM9 23.4
GTEX-YB5K-1926-SM-4VDT4 23.4
GTEX-WHWD-0126-SM-4OORS 23.3
GTEX-QV31-0126-SM-447BP 23.2
GTEX-OIZH-0926-SM-48TBR 23.1
GTEX-Q2AH-0226-SM-48U1I 23.1
GTEX-117YX-2126-SM-5GIEL 23.0
GTEX-12WSK-0126-SM-5GCO7 22.8
GTEX-ZPU1-1026-SM-4YCEQ 22.8
GTEX-ZVP2-0526-SM-51MSC 22.8
GTEX-W5WG-0626-SM-4SOID 22.6
GTEX-ZLFU-0526-SM-4WWBN 22.6
GTEX-11LCK-0126-SM-5A5M5 22.5
GTEX-QV44-0126-SM-4R1KH 22.4
GTEX-POMQ-0126-SM-48TD6 22.3
GTEX-11DXX-0726-SM-5H12X 22.2
GTEX-PLZ6-0126-SM-48TC6 22.2
GTEX-PW2O-0126-SM-48TC8 22.2
GTEX-131XG-0426-SM-5IFGD 22.1
GTEX-XXEK-0126-SM-4BRVU 22.1
GTEX-Y3IK-0126-SM-4WWE9 22.0
GTEX-146FQ-0626-SM-5LU9U 21.9
GTEX-131XE-1126-SM-5EGHW 21.8
GTEX-O5YT-0926-SM-48TDG 21.8
GTEX-YB5E-0426-SM-5IFHR 21.6
GTEX-XAJ8-0126-SM-47JYG 21.4
GTEX-XPVG-0626-SM-4B65B 21.4
GTEX-Y114-0726-SM-4TT6U 21.4
GTEX-12BJ1-0726-SM-5EGGF 21.3
GTEX-1211K-0426-SM-5FQTP 21.1
GTEX-P4PP-0926-SM-48TBZ 21.1
GTEX-13U4I-1626-SM-5IFFR 21.0
GTEX-PX3G-0926-SM-48U12 21.0
GTEX-Q734-0226-SM-48U1A 21.0
GTEX-R55G-0226-SM-48FEI 21.0
GTEX-Y3I4-0126-SM-4TT26 21.0
GTEX-14E6E-1226-SM-5S2R5 20.7
GTEX-YFCO-0926-SM-5LUA5 20.6
GTEX-13PVR-0326-SM-5RQJY 20.5
GTEX-UJHI-0126-SM-4IHLP 20.5
GTEX-145MN-0126-SM-5RQHY 20.3
GTEX-S3XE-0626-SM-4AD6B 20.3
GTEX-11EQ9-0426-SM-5A5JY 20.2
GTEX-146FR-1926-SM-5NQA6 20.2
GTEX-RUSQ-0126-SM-47JWV 20.2
GTEX-VJYA-0126-SM-4KL1P 20.2
GTEX-139T6-0226-SM-5IFGZ 20.1
GTEX-11P7K-0426-SM-5BC5H 20.0
GTEX-13111-0126-SM-5EGHO 20.0
GTEX-XMK1-0126-SM-4B65F 20.0
GTEX-Y8LW-0126-SM-4VBS1 20.0
GTEX-1122O-0526-SM-5N9DM 19.9
GTEX-13PL7-1126-SM-5MR5O 19.8
GTEX-144GN-2126-SM-5O99D 19.8
GTEX-ZYWO-0226-SM-5GZX3 19.8
GTEX-S4Z8-0226-SM-4AD5K 19.7
GTEX-ZLWG-0426-SM-4WWFA 19.7
GTEX-U3ZH-0126-SM-4DXUK 19.6
GTEX-ZP4G-0326-SM-4YCEF 19.6
GTEX-13S86-0126-SM-5S2PI 19.5
GTEX-ZAB5-0526-SM-5CVMU 19.3
GTEX-T5JW-0126-SM-4DM6K 19.2
GTEX-12WSN-0126-SM-5DUX5 19.1
GTEX-QCQG-0226-SM-48U28 19.1
GTEX-ZVZP-0726-SM-59HKA 19.1
GTEX-139YR-0426-SM-5IFFV 18.7
GTEX-14DAR-0326-SM-5S2PS 18.7
GTEX-11XUK-0426-SM-5EQML 18.6
GTEX-13FH7-1326-SM-5IFG8 18.6
GTEX-147F3-0126-SM-5NQBJ 18.6
GTEX-ZYFG-0726-SM-5GIDX 18.6
GTEX-ZDTT-1026-SM-5KM19 18.5
GTEX-QMRM-0226-SM-4R1K7 18.4
GTEX-11VI4-0126-SM-5GU6Z 18.3
GTEX-U3ZN-0126-SM-4DXUM 18.3
GTEX-XV7Q-0126-SM-4BRVK 18.2
GTEX-132QS-0226-SM-5IFFZ 18.1
GTEX-U4B1-0526-SM-4DXTK 18.1
GTEX-1399S-0226-SM-5IFFG 17.9
GTEX-ZV6S-0826-SM-5NQ6Z 17.9
GTEX-13N11-0126-SM-5KM2Z 17.6
GTEX-11P81-1326-SM-5GU5S 17.5
GTEX-YEC4-0126-SM-4W21T 17.2
GTEX-13X6H-0726-SM-5Q5BX 17.1
GTEX-13CF3-0226-SM-5J1NW 17.0
GTEX-Y5LM-0326-SM-4VBRN 16.7
GTEX-ZZPU-0126-SM-5E446 13.8
Show all

SPLEEN - FANTOM5 CAGE

Average Tags Per Million

14.0

FANTOM5 sample id

Sample description

Tags Per Million

Spleen
Tags Per Million: 14.0
FF:10025-101D7 39,50,70 years, male 14.0

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