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Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
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IFT74
  • TISSUE

  • CELL

  • CANCER

CANCER ATLAS

GENE/PROTEIN

Antibody validation

Dictionary

Level of antibody staining/expression





High
Medium
Low
Not detected

CANCER ATLAS

Gene description

Intraflagellar transport 74

Protein class

Predicted intracellular proteins

Protein evidence

Evidence at protein level
Colorectal cancer
Breast cancer
Prostate cancer
Lung cancer
Liver cancer

STAINING SUMMARY

HPA020247
HPA026684

Tissue

Cancer staining

Protein
expression of
normal tissue

Breast cancer
 
Carcinoid
 
Cervical cancer
 
 
Colorectal cancer
 
 
Endometrial cancer
 
 
Glioma
 
Head and neck cancer
 
 
Liver cancer
 
 
Lung cancer
 
 
Lymphoma
 
 
 

Tissue

Cancer staining

Protein
expression of
normal tissue

Melanoma
 
Ovarian cancer
 
Pancreatic cancer
 
Prostate cancer
 
Renal cancer
 
Skin cancer
 
Stomach cancer
 
 
Testis cancer
 
Thyroid cancer
 
Urothelial cancer
 

Staining summary

Weak to moderate cytoplasmic staining in the majority of malignant tissues. A few melanomas and skin cancers were strongly stained. Most lymphomas, lung, testis and renal carcinomas were negative.

Tissue

Cancer staining

Protein
expression of
normal tissue

Breast cancer
 
Carcinoid
 
Cervical cancer
 
 
Colorectal cancer
 
 
Endometrial cancer
 
 
Glioma
 
Head and neck cancer
 
 
Liver cancer
 
 
Lung cancer
 
 
Lymphoma
 
 
 

Tissue

Cancer staining

Protein
expression of
normal tissue

Melanoma
 
Ovarian cancer
 
Pancreatic cancer
 
Prostate cancer
 
Renal cancer
 
Skin cancer
 
Stomach cancer
 
 
Testis cancer
 
Thyroid cancer
 
Urothelial cancer
 

Staining summary

Carcinoids, colorectal, thyroid and head and neck cancers as well as several cases of renal cancers showed moderate cytoplasmic positivity. Remaining cancer tissues were weakly stained or negative.

GENE INFORMATION

Gene name

IFT74 (HGNC Symbol)

Synonyms

CCDC2, CMG-1, CMG1, FLJ22621

Description

Intraflagellar transport 74 (HGNC Symbol)

Entrez gene summary

Chromosome

9

Cytoband

p21.2

Chromosome location (bp)

26947039 - 27062930

Protein evidence

Evidence at protein level (all genes)

Ensembl

ENSG00000096872 (version 83.38)

Entrez gene

80173

UniProt

Q96LB3 (UniProt - Evidence at protein level)

neXtProt

NX_Q96LB3

Antibodypedia

IFT74 antibodies

PROTEIN BROWSER

IFT74-001
IFT74-004
IFT74-005
IFT74-006
IFT74-007
IFT74-008
IFT74-201
IFT74-202

PROTEIN INFORMATION

Splice variant

UniProt

Protein class

Gene ontology

Length & mass

Signal peptide
(predicted)

Transmembrane regions
(predicted)

IFT74-001
ENSP00000369402
ENST00000380062
Q96LB3 [Direct mapping]
Intraflagellar transport protein 74 homolog
Show all
Predicted intracellular proteins
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005813 [centrosome]
GO:0005929 [cilium]
GO:0006996 [organelle organization]
GO:0016023 [cytoplasmic membrane-bounded vesicle]
GO:0030992 [intraciliary transport particle B]
GO:0031514 [motile cilium]
GO:0035735 [intraciliary transport involved in cilium morphogenesis]
GO:0042384 [cilium assembly]
GO:0048487 [beta-tubulin binding]
GO:0072372 [primary cilium]
GO:0097542 [ciliary tip]
Show all
600 aa
69.2 kDa
No 0
IFT74-004
ENSP00000393907
ENST00000429045
Q96LB3 [Direct mapping]
Intraflagellar transport protein 74 homolog
Show all
Predicted intracellular proteins
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005813 [centrosome]
GO:0005929 [cilium]
GO:0006996 [organelle organization]
GO:0016023 [cytoplasmic membrane-bounded vesicle]
GO:0030992 [intraciliary transport particle B]
GO:0031514 [motile cilium]
GO:0035735 [intraciliary transport involved in cilium morphogenesis]
GO:0042384 [cilium assembly]
GO:0048487 [beta-tubulin binding]
GO:0072372 [primary cilium]
GO:0097542 [ciliary tip]
Show all
372 aa
42.3 kDa
No 0
IFT74-005
ENSP00000430742
ENST00000517866
E5RIF0 [Direct mapping]
Intraflagellar transport protein 74 homolog
Show all
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005813 [centrosome]
GO:0005929 [cilium]
GO:0030992 [intraciliary transport particle B]
GO:0042073 [intraciliary transport]
GO:0042384 [cilium assembly]
GO:0048487 [beta-tubulin binding]
Show all
147 aa
16.4 kDa
No 0
IFT74-006
ENSP00000430526
ENST00000518614
E5RJK3 [Direct mapping]
Intraflagellar transport protein 74 homolog
Show all
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005813 [centrosome]
GO:0005929 [cilium]
GO:0030992 [intraciliary transport particle B]
GO:0042073 [intraciliary transport]
GO:0042384 [cilium assembly]
GO:0048487 [beta-tubulin binding]
Show all
146 aa
15.3 kDa
No 0
IFT74-007
ENSP00000430004
ENST00000519968
E5RH29 [Direct mapping]
Intraflagellar transport protein 74 homolog
Show all
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005813 [centrosome]
GO:0005929 [cilium]
GO:0030992 [intraciliary transport particle B]
GO:0042073 [intraciliary transport]
GO:0042384 [cilium assembly]
GO:0048487 [beta-tubulin binding]
Show all
175 aa
19 kDa
No 0
IFT74-008
ENSP00000430096
ENST00000517444
E5RGX6 [Direct mapping]
Intraflagellar transport protein 74 homolog
Show all
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005813 [centrosome]
GO:0005929 [cilium]
GO:0030992 [intraciliary transport particle B]
GO:0042073 [intraciliary transport]
GO:0042384 [cilium assembly]
GO:0048487 [beta-tubulin binding]
Show all
127 aa
13.4 kDa
No 0
IFT74-201
ENSP00000389224
ENST00000433700
Q96LB3 [Direct mapping]
Intraflagellar transport protein 74 homolog
Show all
Predicted intracellular proteins
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005813 [centrosome]
GO:0005929 [cilium]
GO:0006996 [organelle organization]
GO:0016023 [cytoplasmic membrane-bounded vesicle]
GO:0030992 [intraciliary transport particle B]
GO:0031514 [motile cilium]
GO:0035735 [intraciliary transport involved in cilium morphogenesis]
GO:0042384 [cilium assembly]
GO:0048487 [beta-tubulin binding]
GO:0072372 [primary cilium]
GO:0097542 [ciliary tip]
Show all
600 aa
69.2 kDa
No 0
IFT74-202
ENSP00000404122
ENST00000443698
Q96LB3 [Direct mapping]
Intraflagellar transport protein 74 homolog
Show all
Predicted intracellular proteins
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003334 [keratinocyte development]
GO:0003682 [chromatin binding]
GO:0005634 [nucleus]
GO:0005813 [centrosome]
GO:0005929 [cilium]
GO:0006996 [organelle organization]
GO:0007219 [Notch signaling pathway]
GO:0007368 [determination of left/right symmetry]
GO:0007507 [heart development]
GO:0008544 [epidermis development]
GO:0016023 [cytoplasmic membrane-bounded vesicle]
GO:0030992 [intraciliary transport particle B]
GO:0031514 [motile cilium]
GO:0033630 [positive regulation of cell adhesion mediated by integrin]
GO:0035735 [intraciliary transport involved in cilium morphogenesis]
GO:0042384 [cilium assembly]
GO:0045944 [positive regulation of transcription from RNA polymerase II promoter]
GO:0048487 [beta-tubulin binding]
GO:0050680 [negative regulation of epithelial cell proliferation]
GO:0060271 [cilium morphogenesis]
GO:0072372 [primary cilium]
GO:0097542 [ciliary tip]
Show all
600 aa
69.2 kDa
No 0

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