We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
DDT
  • TISSUE

  • CELL

  • CANCER

TISSUE ATLAS PRIMARY DATA CAUDATE

GENE/PROTEIN

Antibody validation


Dictionary

Caudate

CAUDATE - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:10.0RPKM

CAUDATE - Annotated protein expression

Annotated protein
expression

Glial cells:Not detected
Neuronal cells:Low
 

Antibody staining

Antibody HPA049871

 

Glial cells

Not detected  

Neuronal cells

Low  
 
 
 

CAUDATE - HPA RNA-seq

Pending HPA RNA-seq analysis


CAUDATE - GTEx RNA-seq

Average RPKM

10.0

GTEx sample id

RPKM

 

Brain - Caudate (basal ganglia)

Brain - Caudate (basal ganglia)
RPKM: 10.0
Samples: 117

Max RPKM: 21.7
Min RPKM: 4.7
Std RPKM: 3.2
Median RPKM: 9.8
GTEX-12WSA-0011-R5b-SM-5GU5I 21.7
GTEX-139TT-0011-R5b-SM-5K7W8 20.8
GTEX-13FLW-0011-R5a-SM-5LZX6 19.3
GTEX-ZUA1-0011-R5b-SM-51MTG 17.0
GTEX-T5JC-0011-R5A-SM-32PLK 15.8
GTEX-T6MN-0011-R5A-SM-32QPD 15.3
GTEX-X585-0011-R5A-SM-46MVI 15.3
GTEX-132Q8-0011-R5a-SM-5IJDM 14.6
GTEX-1399T-0011-R5b-SM-5IJDK 14.5
GTEX-13FHO-0011-R5b-SM-5LZZ3 14.2
GTEX-13FLV-0011-R5a-SM-5LZWT 14.2
GTEX-12WSC-0011-R5b-SM-5CVNS 14.1
GTEX-13RTJ-0011-R5a-SM-5P9HR 14.0
GTEX-13OVJ-0011-R5a-SM-5P9H7 13.7
GTEX-ZAB4-0011-R5a-SM-4SOKC 13.7
GTEX-12WSM-0011-R5a-SM-5EQ4Y 13.3
GTEX-11H98-0011-R5b-SM-57WCF 13.0
GTEX-13X6I-0011-R5a-SM-5PNWW 13.0
GTEX-13X6K-0011-R5b-SM-5PNUE 13.0
GTEX-13N1W-0011-R5b-SM-5MR5Q 12.9
GTEX-11OF3-0011-R5a-SM-57WB4 12.7
GTEX-14BIM-0011-R5b-SM-5S2RM 12.7
GTEX-12WSF-0011-R5a-SM-5HL8K 12.6
GTEX-TSE9-0011-R5A-SM-3DB7J 12.5
GTEX-13G51-0011-R5a-SM-5L3EB 12.3
GTEX-S7SE-0011-R5A-SM-2XCDA 12.2
GTEX-12ZZY-0011-R5a-SM-5EGL9 12.1
GTEX-RU72-0011-R5A-SM-2TF6U 12.0
GTEX-13NYB-0011-R5a-SM-5MR45 11.9
GTEX-12WSB-0011-R5b-SM-5GU67 11.7
GTEX-13OW8-0011-R5b-SM-5L3FQ 11.7
GTEX-13OVH-0011-R5b-SM-5KM4L 11.5
GTEX-X261-0011-R5A-SM-3NMB4 11.5
GTEX-139T8-0011-R5b-SM-5J1MO 11.4
GTEX-13JUV-0011-R5a-SM-5LZY5 11.4
GTEX-14ABY-0011-R5b-SM-5SI7B 11.4
GTEX-Y8DK-0011-R5B-SM-4RTW6 11.4
GTEX-11GSP-0011-R5a-SM-57WBE 11.3
GTEX-13O3Q-0011-R5b-SM-5P9H4 11.3
GTEX-13JVG-0011-R5a-SM-5MR4O 11.2
GTEX-WWYW-0011-R5A-SM-3NB3E 11.2
GTEX-13FXS-0011-R5b-SM-5LZYE 11.1
GTEX-131YS-0011-R5b-SM-5K7YB 11.0
GTEX-13VXU-0011-R5a-SM-5O9D7 10.8
GTEX-UTHO-0011-R5A-SM-3GIJD 10.7
GTEX-145MH-0011-R5a-SM-5P9JT 10.6
GTEX-P44H-0011-R5A-SM-2XCEX 10.6
GTEX-WZTO-0011-R5B-SM-3NMC5 10.6
GTEX-WVLH-0011-R5A-SM-3MJFW 10.5
GTEX-12ZZW-0011-R5a-SM-5DUVN 10.4
GTEX-R55E-0011-R5A-SM-2TC5N 10.4
GTEX-X4XX-0011-R5A-SM-46MWN 10.4
GTEX-Q2AG-0011-R5A-SM-2HMJH 10.3
GTEX-13NYS-0011-R5a-SM-5MR4D 10.2
GTEX-Z93S-0011-R5b-SM-4RGNI 10.0
GTEX-11NV4-0011-R5a-SM-5NQ88 9.8
GTEX-1313W-0011-R5b-SM-5L3EP 9.8
GTEX-13O3O-0011-R5b-SM-5KM44 9.8
GTEX-WL46-0011-R5A-SM-3LK6V 9.8
GTEX-13CZV-0011-R5a-SM-5K7XA 9.7
GTEX-WHSE-0011-R5A-SM-3P5ZO 9.6
GTEX-N7MT-0011-R5a-SM-2I3G6 9.5
GTEX-13OW5-0011-R5b-SM-5L3FR 9.4
GTEX-ZF28-0011-R5a-SM-4WWCZ 9.4
GTEX-145LS-0011-R5a-SM-5SI65 9.1
GTEX-13OW7-0011-R5b-SM-5O9DM 9.0
GTEX-ZE7O-0011-R5a-SM-57WBO 9.0
GTEX-13OW6-0011-R5a-SM-5O9BK 8.9
GTEX-13X6J-0011-R5b-SM-5PNWT 8.9
GTEX-13SLX-0011-R5a-SM-5O9BV 8.8
GTEX-N7MS-0011-R5a-SM-2HMK8 8.8
GTEX-13CIG-0011-R5b-SM-5L3F2 8.7
GTEX-144GO-0011-R5a-SM-5PNUR 8.7
GTEX-YFC4-0011-R5a-SM-4RGLR 8.6
GTEX-XMD1-0011-R5A-SM-4AT47 8.5
GTEX-ZV68-0011-R5a-SM-4YCDW 8.5
GTEX-13FHP-0011-R5b-SM-5LZY2 8.4
GTEX-RVPU-0011-R5A-SM-2XCAD 8.4
GTEX-13OVL-0011-R5b-SM-5L3FU 8.3
GTEX-T2IS-0011-R5A-SM-32QP4 8.3
GTEX-PVOW-0011-R5A-SM-32PL7 8.2
GTEX-12ZZX-0011-R5a-SM-5HL89 8.1
GTEX-RVPV-0011-R5A-SM-2TF69 8.1
GTEX-XOTO-0011-R5A-SM-4B657 8.1
GTEX-12WSH-0011-R5b-SM-5P9F3 7.9
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 7.9
GTEX-ZE9C-0011-R5a-SM-5EGLO 7.8
GTEX-13SLW-0011-R5b-SM-5SI6Z 7.7
GTEX-11WQC-0011-R5a-SM-5BC74 7.6
GTEX-1445S-0011-R5a-SM-5PNUS 7.5
GTEX-QMR6-0011-R5A-SM-32PKT 7.4
GTEX-12WSD-0011-R5b-SM-5CVNG 7.2
GTEX-139TS-0011-R5b-SM-5J2MZ 7.0
GTEX-ZVT3-0011-R5a-SM-51MSI 7.0
GTEX-13S7M-0011-R5b-SM-5P9HS 6.9
GTEX-14BIN-0011-R5b-SM-5SI78 6.9
GTEX-OHPN-0011-R5A-SM-2I5FF 6.9
GTEX-13PVQ-0011-R5b-SM-5O9DI 6.7
GTEX-13PLJ-0011-R5a-SM-5O9BG 6.5
GTEX-YJ89-0011-R5a-SM-4V6GM 6.5
GTEX-11UD1-0011-R5b-SM-5P9FP 6.4
GTEX-PWO3-0011-R5A-SM-2I5EZ 6.4
GTEX-ZVZQ-0011-R5b-SM-57WDC 6.3
GTEX-NL3H-0011-R5a-SM-2I3GB 6.2
GTEX-S7PM-0011-R5A-SM-3NM8G 6.2
GTEX-ZXG5-0011-R5b-SM-57WBN 6.2
GTEX-NPJ7-0011-R5a-SM-33HBK 6.1
GTEX-NPJ8-0011-R5a-SM-2HMJY 6.1
GTEX-QVJO-0011-R5A-SM-2S1QM 6.0
GTEX-144GL-0011-R5b-SM-5PNUJ 5.6
GTEX-13112-0011-R5b-SM-5DUV8 5.3
GTEX-NL4W-0011-R5a-SM-2I3GD 5.1
GTEX-13CF2-0011-R5a-SM-5LZWS 4.9
GTEX-OXRN-0011-R5A-SM-2I5EF 4.8
GTEX-13NZA-0011-R5b-SM-5KM4K 4.7
GTEX-145MG-0011-R5b-SM-5S2VU 4.7
GTEX-1477Z-0011-R5b-SM-5PNUO 4.7
Show all

CAUDATE - FANTOM5 CAGE

No Fantom CAGE analysis found for this gene / tissue

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.