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Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
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NEFH
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TISSUE ATLAS PRIMARY DATA

GENE/PROTEIN

Antibody validation


Dictionary


Tissue proteome

GENERAL INFORMATION

Gene name

NEFH

Gene description

Neurofilament, heavy polypeptide

Protein class

Disease related genes
Predicted intracellular proteins

Predicted localization

Intracellular

Number of transcripts

1
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HUMAN PROTEIN ATLAS INFORMATION

RNA tissue category

HPA:Tissue enriched (prostate)
GTEx:Tissue enhanced (prostate)
FANTOM5:Tissue enhanced (brain, cerebellum)

Protein evidence

Evidence at protein level

Protein expression

Selective expression in CNS, peripheral nerves and glandular cells of prostate.

DATA RELIABILITY

Data reliability
description

Antibody staining consistent with RNA expression data.

Reliability score

Supported based on 2 antibodies.
HPA061615 , CAB007786
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RNA AND PROTEIN EXPRESSION SUMMARY

RNA expression (TPM) Protein expression (score)
Brain
Cerebral cortex
Hippocampus
N/A
Caudate
N/A
Cerebellum
N/A
Endocrine tissues
Thyroid gland
Parathyroid gland
Adrenal gland
Bone marrow & immune system
Appendix
Bone marrow
Lymph node
Tonsil
Spleen
Muscle tissues
Heart muscle
Skeletal muscle
Smooth muscle
Lung
Nasopharynx
N/A
Bronchus
N/A
Lung
Liver & gallbladder
Liver
Gallbladder
Pancreas
Pancreas
Gastrointestinal tract
Oral mucosa
N/A
Salivary gland
Esophagus
Stomach
Duodenum
Small intestine
Colon
Rectum
Kidney & urinary bladder
Kidney
Urinary bladder
Male tissues
Testis
Epididymis
Prostate
Seminal vesicle
Female tissues
Breast
Vagina
N/A
Cervix, uterine
Endometrium
Fallopian tube
Ovary
Placenta
Adipose & soft tissue
Adipose tissue
Soft tissue
N/A
Skin
Skin
Cerebral cortex

Lymph node

Liver

Colon

Kidney

Testis

Prostate

PROTEIN EXPRESSION OVERVIEW

Organ
Expression
Alphabetical

RNA EXPRESSION OVERVIEW

HPA dataset
Organ
Expression
Alphabetical
RNA tissue category: Tissue enriched (prostate)
GTEx dataset
Organ
Expression
Alphabetical
RNA tissue category: Tissue enhanced (prostate)
FANTOM5 dataset
Organ
Expression
Alphabetical
RNA tissue category: Tissue enhanced (brain, cerebellum)

GENE INFORMATION

Gene name

NEFH

Synonyms

Description

Neurofilament, heavy polypeptide (HGNC Symbol)

Entrez gene summary

Neurofilaments are type IV intermediate filament heteropolymers composed of light, medium, and heavy chains. Neurofilaments comprise the axoskeleton and functionally maintain neuronal caliber. They may also play a role in intracellular transport to axons and dendrites. This gene encodes the heavy neurofilament protein. This protein is commonly used as a biomarker of neuronal damage and susceptibility to amyotrophic lateral sclerosis (ALS) has been associated with mutations in this gene. [provided by RefSeq, Oct 2008]

Chromosome

22

Cytoband

q12.2

Chromosome location (bp)

29480230 - 29491390

Protein evidence

Evidence at protein level (all genes)

Ensembl

ENSG00000100285 (version 83.38)

Entrez gene

4744

UniProt

P12036 (UniProt - Evidence at protein level)

neXtProt

NX_P12036

Antibodypedia

NEFH antibodies

PROTEIN BROWSER

NEFH-001

PROTEIN INFORMATION

Splice variant

UniProt

Protein class

Gene ontology

Length & mass

Signal peptide
(predicted)

Transmembrane regions
(predicted)

NEFH-001
ENSP00000311997
ENST00000310624
P12036 [Direct mapping]
Neurofilament heavy polypeptide
Show all
Predicted intracellular proteins
Disease related genes
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000226 [microtubule cytoskeleton organization]
GO:0001552 [ovarian follicle atresia]
GO:0005198 [structural molecule activity]
GO:0005200 [structural constituent of cytoskeleton]
GO:0005634 [nucleus]
GO:0005737 [cytoplasm]
GO:0005739 [mitochondrion]
GO:0005882 [intermediate filament]
GO:0005883 [neurofilament]
GO:0007409 [axonogenesis]
GO:0007420 [brain development]
GO:0008017 [microtubule binding]
GO:0015643 [toxic substance binding]
GO:0019894 [kinesin binding]
GO:0019901 [protein kinase binding]
GO:0021510 [spinal cord development]
GO:0021766 [hippocampus development]
GO:0021987 [cerebral cortex development]
GO:0030031 [cell projection assembly]
GO:0030424 [axon]
GO:0030674 [protein binding, bridging]
GO:0031103 [axon regeneration]
GO:0031175 [neuron projection development]
GO:0033693 [neurofilament bundle assembly]
GO:0034599 [cellular response to oxidative stress]
GO:0042220 [response to cocaine]
GO:0043204 [perikaryon]
GO:0043209 [myelin sheath]
GO:0045104 [intermediate filament cytoskeleton organization]
GO:0045110 [intermediate filament bundle assembly]
GO:0045502 [dynein binding]
GO:0046982 [protein heterodimerization activity]
GO:0048936 [peripheral nervous system neuron axonogenesis]
GO:0060052 [neurofilament cytoskeleton organization]
GO:0061564 [axon development]
GO:0071392 [cellular response to estradiol stimulus]
GO:0097418 [neurofibrillary tangle]
GO:0097481 [neuronal postsynaptic density]
GO:1902513 [regulation of organelle transport along microtubule]
GO:1903935 [response to sodium arsenite]
GO:1903937 [response to acrylamide]
Show all
1020 aa
111.8 kDa
No 0

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