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TISSUE ATLAS PRIMARY DATA CEREBRAL CORTEX

GENE/PROTEIN

Antibody validation


Dictionary

Cerebral cortex

Tissue proteome

Brain
Extended brain samples

CEREBRAL CORTEX - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:37.4TPM
GTEx:42.5RPKM

CEREBRAL CORTEX - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glial cells:Not detected
Neuronal cells:Not detected
Neuropil:Medium
 

Antibody staining

Antibody HPA061615

 

Antibody CAB007786

 

Endothelial cells

Not detected   Not detected  

Glial cells

Not detected   Not detected  

Neuronal cells

Not detected   High  

Neuropil

Medium   Low  
   
   
   

CEREBRAL CORTEX - HPA RNA-seq

Average TPM

37.4

N/A Male, age 5
Sample 1
TPM: 32.1
overview Female, age 40
Sample 2
TPM: 14.5
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65
overview Male, age 70
Sample 3
TPM: 65.8
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM

42.5

GTEx sample id

RPKM

 

Brain - Cortex

Brain - Cortex
RPKM: 34.7
Samples: 114

Max RPKM: 71.2
Min RPKM: 4.1
Std RPKM: 16.5
Median RPKM: 35.2
GTEX-PVOW-2526-SM-2XCF7 71.2
GTEX-11DXY-3226-SM-5GIDE 69.0
GTEX-14ASI-3026-SM-5S2PN 68.4
GTEX-14BMV-3026-SM-5S2PQ 64.8
GTEX-13O3Q-2926-SM-5KM45 63.8
GTEX-12WSC-3026-SM-5GCNF 62.2
GTEX-145MH-3026-SM-5Q5DZ 61.2
GTEX-145LS-3126-SM-5Q5BY 61.1
GTEX-QVJO-1426-SM-2S1QY 60.8
GTEX-11ZUS-2926-SM-5FQSL 59.7
GTEX-X585-3026-SM-46MWF 59.1
GTEX-117XS-3026-SM-5N9CA 58.4
GTEX-13VXU-2926-SM-5LU5C 57.4
GTEX-UTHO-3026-SM-3GAFB 55.3
GTEX-X4XX-3026-SM-3NMB2 55.0
GTEX-11PRG-2926-SM-5987A 53.8
GTEX-T5JC-2426-SM-3NMDB 53.8
GTEX-145MF-2726-SM-5O995 53.0
GTEX-Y8DK-0826-SM-4TT3T 52.8
GTEX-11DXW-1126-SM-5H12Q 52.3
GTEX-T2IS-3026-SM-32QPM 52.3
GTEX-T6MN-2626-SM-32PMQ 52.1
GTEX-WWYW-3126-SM-3NB39 51.8
GTEX-WVLH-3026-SM-3MJG9 51.5
GTEX-WL46-2926-SM-3LK82 51.2
GTEX-11O72-2926-SM-5BC4V 50.6
GTEX-11GSO-2926-SM-5HL73 48.0
GTEX-Y111-2726-SM-4TT3N 46.3
GTEX-ZAK1-3026-SM-5S2MJ 45.4
GTEX-13O3O-3126-SM-5KM3H 44.7
GTEX-1313W-3126-SM-5LZUI 44.4
GTEX-YJ89-3026-SM-5IFJI 44.2
GTEX-13SLX-3126-SM-5S2Q5 43.8
GTEX-1399T-3026-SM-5KLZC 43.7
GTEX-QVUS-2826-SM-3GADB 42.7
GTEX-13NYS-3126-SM-5KLYV 42.4
GTEX-13OW8-2826-SM-5L3GC 42.3
GTEX-XLM4-3026-SM-4AT6L 42.0
GTEX-YFC4-3126-SM-5PNV6 41.9
GTEX-XOTO-3026-SM-4B65M 41.7
GTEX-13NYC-2826-SM-5K7WR 41.6
GTEX-13FXS-3126-SM-5J2NN 41.1
GTEX-145MG-3026-SM-5RQJA 41.0
GTEX-RNOR-2326-SM-2TF4I 40.4
GTEX-13OW6-3026-SM-5J2MI 40.2
GTEX-12126-1026-SM-5P9JJ 40.0
GTEX-1128S-2726-SM-5H12C 39.3
GTEX-12ZZW-2926-SM-5LZUP 38.2
GTEX-12ZZY-3026-SM-5GCOU 38.1
GTEX-111FC-3126-SM-5GZZ2 37.2
GTEX-11ONC-2926-SM-5P9JM 36.6
GTEX-144GL-3026-SM-5Q5CW 36.4
GTEX-12WSH-3026-SM-5CVNI 35.9
GTEX-13X6J-3026-SM-5Q5CU 35.9
GTEX-13FHP-3026-SM-5IJBS 35.6
GTEX-TSE9-3026-SM-3DB76 35.6
GTEX-12ZZX-2926-SM-5GCOQ 35.2
GTEX-ZVT3-3026-SM-5E43N 35.1
GTEX-WHSE-3026-SM-3P5ZH 34.8
GTEX-Z93S-2926-SM-57WB9 34.5
GTEX-131YS-3126-SM-5KLYT 34.3
GTEX-ZUA1-3026-SM-59HJC 34.1
GTEX-ZYFD-3026-SM-5E44C 33.7
GTEX-12ZZZ-3026-SM-5BC67 33.2
GTEX-13OVH-3026-SM-5MR4N 32.9
GTEX-132Q8-3026-SM-5PNVG 31.9
GTEX-11NUK-2926-SM-5A5MD 31.4
GTEX-R55F-1326-SM-5S2V4 31.1
GTEX-WZTO-2926-SM-3NM9I 31.0
GTEX-11OC5-0726-SM-5P9JK 30.0
GTEX-Q2AG-2926-SM-2HMJ3 29.7
GTEX-13FLW-1426-SM-5K7YE 28.0
GTEX-QMR6-1426-SM-32PLA 27.6
GTEX-13NYB-3026-SM-5IJD7 27.4
GTEX-14A5I-2926-SM-5Q5CQ 26.4
GTEX-11GS4-3126-SM-5A5LH 26.2
GTEX-1192X-3126-SM-5N9BY 24.9
GTEX-13FHO-3026-SM-5J1O9 24.9
GTEX-11WQK-3026-SM-5EQL6 24.3
GTEX-13S7M-3126-SM-5RQJQ 23.7
GTEX-ZZPT-3026-SM-5GZXH 22.5
GTEX-OXRN-2426-SM-2I5EQ 22.0
GTEX-RU72-3026-SM-5SI7Y 21.1
GTEX-11EI6-3026-SM-5GZZO 21.0
GTEX-11OF3-2926-SM-5HL78 20.0
GTEX-131XW-3126-SM-5LZUC 19.4
GTEX-ZAJG-3126-SM-5HL9J 18.2
GTEX-11EMC-3226-SM-5EGKW 17.9
GTEX-13OW7-3026-SM-5L3GY 17.6
GTEX-13G51-3026-SM-5IJB8 17.0
GTEX-144FL-3026-SM-5O99C 16.8
GTEX-139T8-1026-SM-5J2MC 16.4
GTEX-12WSD-3126-SM-5HL7P 16.1
GTEX-1117F-3226-SM-5N9CT 15.9
GTEX-NPJ8-1526-SM-2D7VU 15.9
GTEX-PWO3-0926-SM-2I5EY 15.9
GTEX-ZE7O-3126-SM-5HL5X 15.7
GTEX-11TTK-2926-SM-5PNYP 15.1
GTEX-NPJ7-2726-SM-2I3FT 14.9
GTEX-13PL6-3126-SM-5LUAR 14.6
GTEX-N7MT-1126-SM-5SI7V 14.4
GTEX-QDT8-2926-SM-32PKC 14.4
GTEX-13QIC-2926-SM-5J2NF 12.9
GTEX-13JUV-2926-SM-5LZX7 12.5
GTEX-13PVQ-3026-SM-5SI93 12.0
GTEX-13X6K-2926-SM-5Q5D5 12.0
GTEX-147GR-3026-SM-5S2ML 11.6
GTEX-11NV4-2126-SM-5N9DS 11.2
GTEX-1445S-3026-SM-5O9BR 10.9
GTEX-13IVO-2926-SM-5L3CZ 10.8
GTEX-13JVG-3126-SM-5L3FH 10.0
GTEX-12WSA-2926-SM-5EQ4D 6.4
GTEX-11GSP-3226-SM-5986O 4.4
GTEX-13OVJ-2826-SM-5L3GW 4.1
Show all
 

Brain - Frontal Cortex (BA9)

Brain - Frontal Cortex (BA9)
RPKM: 50.7
Samples: 108

Max RPKM: 143.4
Min RPKM: 2.9
Std RPKM: 33.6
Median RPKM: 43.8
GTEX-12WSC-0011-R10a-SM-5GU57 143.4
GTEX-145LS-0011-R10a-SM-5PNUQ 140.8
GTEX-13RTJ-0011-R10b-SM-5O9CW 134.0
GTEX-131YS-0011-R10b-SM-5EQ5N 120.9
GTEX-145MH-0011-R10b-SM-5PNUK 114.1
GTEX-14ASI-0011-R10b-SM-5S2VZ 111.0
GTEX-NL3H-0011-R10A-SM-2I3E9 110.5
GTEX-X585-0011-R10A-SM-46MUY 106.4
GTEX-X4XX-0011-R10B-SM-46MWO 100.8
GTEX-145MG-0011-R10a-SM-5PNWG 100.2
GTEX-13OW7-0011-R10a-SM-5L3H3 99.9
GTEX-N7MT-0011-R10A-SM-2I3E1 99.2
GTEX-12ZZZ-0011-R10a-SM-5P9HC 98.9
GTEX-WL46-0011-R10A-SM-3MJFQ 97.5
GTEX-XLM4-0011-R10A-SM-4AT5P 96.3
GTEX-1313W-0011-R10b-SM-5DUXA 92.9
GTEX-Y8DK-0011-R10A-SM-4SOK1 89.8
GTEX-13O3Q-0011-R10b-SM-5KM39 89.3
GTEX-14BIN-0011-R10a-SM-5S2UA 88.1
GTEX-132Q8-0011-R10b-SM-5DUWZ 86.6
GTEX-13S7M-0011-R10b-SM-5PNZB 80.2
GTEX-QVJO-0011-R10A-SM-2S1QJ 79.6
GTEX-T6MN-0011-R10A-SM-32QP7 79.5
GTEX-13NYS-0011-R10a-SM-5MR4S 74.8
GTEX-ZF28-0011-R10a-SM-4WWEH 74.0
GTEX-13X6J-0011-R10b-SM-5PNWA 73.5
GTEX-S7SE-0011-R10A-SM-2XCDF 71.1
GTEX-12WSE-0011-R10b-SM-5P9JV 70.7
GTEX-13SLX-0011-R10a-SM-5P9HV 69.8
GTEX-13X6I-0011-R10a-SM-5PNWI 67.6
GTEX-13OW8-0011-R10a-SM-5L3H6 67.0
GTEX-13FXS-0011-R10a-SM-5J2MA 66.6
GTEX-N7MS-0011-R10A-SM-2HMJK 62.8
GTEX-13CZV-0011-R10b-SM-5LZYD 62.7
GTEX-12WSF-0011-R10a-SM-5LZVH 62.4
GTEX-WVLH-0011-R10A-SM-3MJFM 62.0
GTEX-WZTO-0011-R10B-SM-4E3KB 61.2
GTEX-13FHO-0011-R10b-SM-5J2MM 60.5
GTEX-Q2AG-0011-R10A-SM-2HMLA 59.2
GTEX-13NYB-0011-R10a-SM-5KM43 58.3
GTEX-13G51-0011-R10b-SM-5LZYF 57.2
GTEX-13N1W-0011-R10b-SM-5MR4H 56.5
GTEX-T5JC-0011-R10A-SM-32PM2 56.2
GTEX-12WSH-0011-R10a-SM-5LZUS 55.6
GTEX-QVUS-0011-R10A-SM-3GIK3 54.8
GTEX-12WSM-0011-R10a-SM-5DUWV 52.4
GTEX-YFC4-0011-R10a-SM-4SOK5 52.1
GTEX-13O3O-0011-R10a-SM-5LUA9 49.8
GTEX-ZAB4-0011-R10a-SM-4SOKH 49.5
GTEX-147GR-0011-R10b-SM-5S2UM 47.7
GTEX-WWYW-0011-R10A-SM-3NB35 47.3
GTEX-13FLW-0011-R10b-SM-5LZZF 46.8
GTEX-QDT8-0011-R10A-SM-32PKG 44.2
GTEX-13X6K-0011-R10a-SM-5P9JR 44.1
GTEX-13FTZ-0011-R10b-SM-5KLZS 43.5
GTEX-13OVL-0011-R10a-SM-5L3GS 43.3
GTEX-13QJC-0011-R10a-SM-5SI63 41.9
GTEX-14BIL-0011-R10a-SM-5SI75 41.3
GTEX-12ZZX-0011-R10b-SM-5DUWK 40.0
GTEX-12ZZW-0011-R10b-SM-5HL9X 39.6
GTEX-13QIC-0011-R10a-SM-5O9C7 38.2
GTEX-11H98-0011-R10b-SM-5NQ98 37.7
GTEX-YJ89-0011-R10a-SM-4SOK9 37.1
GTEX-145LU-0011-R10a-SM-5PNWJ 36.8
GTEX-12126-0011-R10b-SM-5BC6T 36.5
GTEX-13OW6-0011-R10a-SM-5L3HE 35.7
GTEX-NPJ7-0011-R10A-SM-2I3E5 35.6
GTEX-ZVZQ-0011-R10b-SM-51MRT 35.4
GTEX-NPJ8-0011-R10A-SM-2YUMO 34.5
GTEX-13SLW-0011-R10a-SM-5S2UI 33.9
GTEX-13JUV-0011-R10b-SM-5LZXR 33.7
GTEX-QMR6-0011-R10A-SM-32PKO 33.4
GTEX-X4EP-0011-R10B-SM-4QASJ 32.8
GTEX-12ZZY-0011-R10b-SM-5HL7W 31.4
GTEX-11ZUS-0011-R10b-SM-5BC79 31.0
GTEX-ZDXO-0011-R10a-SM-4WWD8 28.7
GTEX-13FLV-0011-R10b-SM-5LZZ2 28.2
GTEX-RVPU-0011-R10A-SM-2XCAH 27.8
GTEX-TSE9-0011-R10A-SM-3DB7O 27.1
GTEX-131XH-0011-R10a-SM-5EGLJ 25.6
GTEX-P44H-0011-R10A-SM-2XCEK 25.5
GTEX-ZVT3-0011-R10b-SM-57WB6 24.7
GTEX-147F4-0011-R10b-SM-5S2WC 23.6
GTEX-NL4W-0011-R10A-SM-2I3DY 23.3
GTEX-ZUA1-0011-R10a-SM-51MT6 22.5
GTEX-12WSA-0011-R10b-SM-5P9ET 21.2
GTEX-ZXG5-0011-R10a-SM-57WDD 18.2
GTEX-OXRN-0011-R10A-SM-2I5GC 17.4
GTEX-14753-0011-R10b-SM-5S2WE 16.6
GTEX-13N2G-0011-R10a-SM-5MR34 16.4
GTEX-1477Z-0011-R10b-SM-5S2RF 16.0
GTEX-11WQC-0011-R10a-SM-57WCT 15.9
GTEX-X261-0011-R10B-SM-4E3JT 15.5
GTEX-11WQK-0011-R10a-SM-5BC6R 12.2
GTEX-Z93S-0011-R10a-SM-4RGNM 11.8
GTEX-12WSD-0011-R10b-SM-5GU79 10.8
GTEX-13IVO-0011-R10a-SM-5LZY3 10.7
GTEX-131XW-0011-R10a-SM-5DUVA 9.7
GTEX-139TS-0011-R10a-SM-5K7TU 9.3
GTEX-OXRO-0011-R10A-SM-2I5EH 7.6
GTEX-13NZA-0011-R10b-SM-5KM54 6.3
GTEX-13JVG-0011-R10b-SM-5KM2P 5.9
GTEX-XMD1-0011-R10A-SM-4AT4A 5.6
GTEX-13OVJ-0011-R10b-SM-5L3HT 4.8
GTEX-11GSP-0011-R10a-SM-5NQ7J 4.4
GTEX-ZE7O-0011-R10a-SM-57WAZ 4.2
GTEX-1445S-0011-R10a-SM-5PNWB 3.9
GTEX-ZV68-0011-R10a-SM-51MT7 2.9
Show all

CEREBRAL CORTEX - FANTOM5 CAGE

No Fantom CAGE analysis found for this gene / tissue

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