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TISSUE ATLAS PRIMARY DATA SPLEEN

GENE/PROTEIN

Antibody validation


Dictionary

Spleen

Tissue proteome

Spleen

SPLEEN - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:79.5TPM
GTEx:27.7RPKM
FANTOM5:52.5Tags Per Million

SPLEEN - Annotated protein expression

Annotated protein
expression

Cells in red pulp:Not detected
Cells in white pulp:Not detected
 

Antibody staining

Antibody HPA018885

 

Antibody CAB056156

 

Cells in red pulp

Not detected   Not detected  

Cells in white pulp

Not detected   Not detected  
   
   
   

SPLEEN - HPA RNA-seq

Average TPM

79.5

overview Female, age 60
Sample 1
TPM: 85.7
Cell types%
Lymphocytes: 40
Macrophages: 30
Endothelial cells: 15
Fibroblasts: 5
Other cell types: 10
overview Male, age 17
Sample 2
TPM: 61.2
Cell types%
Lymphocytes: 40
Macrophages: 35
Endothelial cells: 15
Fibroblasts: 5
Other cell types: 5
overview Male, age 20
Sample 3
TPM: 70.7
Cell types%
Lymphocytes: 40
Macrophages: 30
Endothelial cells: 15
Fibroblasts: 5
Other cell types: 10
overview Female, age 19
Sample 4
TPM: 79.8
Cell types%
Lymphocytes: 40
Macrophages: 30
Endothelial cells: 15
Fibroblasts: 10
Other cell types: 5
overview Female, age 65
Sample 5
TPM: 100.3
Cell types%
Lymphocytes: 35
Macrophages: 30
Endothelial cells: 20
Fibroblasts: 10
Other cell types: 5

SPLEEN - GTEx RNA-seq

Average RPKM

27.7

GTEx sample id

RPKM

 

Spleen

Spleen
RPKM: 27.7
Samples: 104

Max RPKM: 57.9
Min RPKM: 13
Std RPKM: 7.3
Median RPKM: 26.8
GTEX-12WSG-0926-SM-5EGIH 57.9
GTEX-13N11-0126-SM-5KM2Z 51.9
GTEX-PX3G-0926-SM-48U12 41.1
GTEX-11NSD-0426-SM-5N9CR 41.0
GTEX-131XG-0426-SM-5IFGD 40.6
GTEX-XV7Q-0126-SM-4BRVK 40.2
GTEX-U3ZN-0126-SM-4DXUM 39.5
GTEX-Q734-0226-SM-48U1A 39.0
GTEX-ZAB5-0526-SM-5CVMU 38.7
GTEX-ZPU1-1026-SM-4YCEQ 38.2
GTEX-QMRM-0226-SM-4R1K7 37.7
GTEX-ZDTT-1026-SM-5KM19 37.0
GTEX-ZYWO-0226-SM-5GZX3 36.7
GTEX-U4B1-0526-SM-4DXTK 36.4
GTEX-131XE-1126-SM-5EGHW 36.3
GTEX-PW2O-0126-SM-48TC8 36.1
GTEX-POMQ-0126-SM-48TD6 34.9
GTEX-13111-0126-SM-5EGHO 34.0
GTEX-ZYFG-0726-SM-5GIDX 33.9
GTEX-YB5E-0426-SM-5IFHR 33.6
GTEX-U3ZH-0126-SM-4DXUK 33.5
GTEX-UPK5-1626-SM-4JBHI 33.4
GTEX-XXEK-0126-SM-4BRVU 33.3
GTEX-146FQ-0626-SM-5LU9U 33.1
GTEX-11EQ9-0426-SM-5A5JY 31.5
GTEX-11P81-1326-SM-5GU5S 31.0
GTEX-WHWD-0126-SM-4OORS 30.8
GTEX-X585-1826-SM-4QAS3 30.8
GTEX-Y3IK-0126-SM-4WWE9 30.6
GTEX-13PVR-0326-SM-5RQJY 30.2
GTEX-12WSJ-0526-SM-5GCOZ 30.0
GTEX-QV44-0126-SM-4R1KH 29.9
GTEX-XMK1-0126-SM-4B65F 29.5
GTEX-T5JW-0126-SM-4DM6K 29.4
GTEX-UJHI-0126-SM-4IHLP 29.3
GTEX-RUSQ-0126-SM-47JWV 29.1
GTEX-QV31-0126-SM-447BP 29.0
GTEX-ZZPU-0126-SM-5E446 28.6
GTEX-YFCO-0926-SM-5LUA5 28.4
GTEX-13X6H-0726-SM-5Q5BX 28.3
GTEX-S4Z8-0226-SM-4AD5K 28.3
GTEX-ZP4G-0326-SM-4YCEF 28.2
GTEX-139T6-0226-SM-5IFGZ 28.0
GTEX-Z9EW-0726-SM-5HL9H 28.0
GTEX-132QS-0226-SM-5IFFZ 27.9
GTEX-14DAR-0326-SM-5S2PS 27.8
GTEX-QLQW-0126-SM-447BK 27.6
GTEX-147F3-0126-SM-5NQBJ 27.5
GTEX-117YX-2126-SM-5GIEL 27.2
GTEX-XPVG-0626-SM-4B65B 27.1
GTEX-13PL7-1126-SM-5MR5O 27.0
GTEX-P4PP-0926-SM-48TBZ 27.0
GTEX-OOBJ-0926-SM-48TDO 26.7
GTEX-1399R-0226-SM-5IJGG 26.6
GTEX-O5YT-0926-SM-48TDG 26.6
GTEX-1122O-0526-SM-5N9DM 26.5
GTEX-PLZ6-0126-SM-48TC6 26.4
GTEX-W5WG-0626-SM-4SOID 26.4
GTEX-12WSN-0126-SM-5DUX5 26.1
GTEX-11DXX-0726-SM-5H12X 25.9
GTEX-12BJ1-0726-SM-5EGGF 25.6
GTEX-13S86-0126-SM-5S2PI 25.5
GTEX-S3XE-0626-SM-4AD6B 25.4
GTEX-WFON-0126-SM-4LVM9 25.3
GTEX-Y5LM-0326-SM-4VBRN 25.3
GTEX-13U4I-1626-SM-5IFFR 25.1
GTEX-YB5K-1926-SM-4VDT4 25.0
GTEX-X4LF-0226-SM-4QAS8 24.0
GTEX-ZLWG-0426-SM-4WWFA 23.9
GTEX-11LCK-0126-SM-5A5M5 23.7
GTEX-139YR-0426-SM-5IFFV 23.6
GTEX-XUJ4-0226-SM-4BOP8 23.6
GTEX-145MN-0126-SM-5RQHY 23.5
GTEX-ZVZP-0726-SM-59HKA 23.5
GTEX-11VI4-0126-SM-5GU6Z 23.4
GTEX-P4QS-0926-SM-48TBS 23.4
GTEX-QCQG-0226-SM-48U28 23.0
GTEX-R55G-0226-SM-48FEI 23.0
GTEX-1211K-0426-SM-5FQTP 22.8
GTEX-X3Y1-0126-SM-4PQZA 22.7
GTEX-13FH7-1326-SM-5IFG8 22.6
GTEX-VJYA-0126-SM-4KL1P 22.5
GTEX-1399S-0226-SM-5IFFG 22.2
GTEX-146FR-1926-SM-5NQA6 22.0
GTEX-ZVP2-0526-SM-51MSC 21.9
GTEX-OIZH-0926-SM-48TBR 21.8
GTEX-144GN-2126-SM-5O99D 21.7
GTEX-ZV6S-0826-SM-5NQ6Z 21.7
GTEX-13CF3-0226-SM-5J1NW 21.3
GTEX-XAJ8-0126-SM-47JYG 21.2
GTEX-13VXT-1326-SM-5LU3Y 20.7
GTEX-ZLFU-0526-SM-4WWBN 20.1
GTEX-14E6E-1226-SM-5S2R5 19.8
GTEX-YEC4-0126-SM-4W21T 19.1
GTEX-Y8LW-0126-SM-4VBS1 18.7
GTEX-11P7K-0426-SM-5BC5H 18.3
GTEX-QDVN-0526-SM-48TZ4 18.1
GTEX-Q2AH-0226-SM-48U1I 17.6
GTEX-XQ8I-1726-SM-4BOQB 17.4
GTEX-Y114-0726-SM-4TT6U 17.4
GTEX-12WSK-0126-SM-5GCO7 16.6
GTEX-11XUK-0426-SM-5EQML 15.8
GTEX-XGQ4-0126-SM-4AT4H 15.4
GTEX-Y3I4-0126-SM-4TT26 13.0
Show all

SPLEEN - FANTOM5 CAGE

Average Tags Per Million

52.5

FANTOM5 sample id

Sample description

Tags Per Million

Spleen
Tags Per Million: 52.5
FF:10025-101D7 39,50,70 years, male 52.5

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