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VTI1B

SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:57.5TPM
GTEx:55.8RPKM
FANTOM5:74.3Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Fibroblasts:Not detected
Adipocytes:Not detected
Chondrocytes:Not detected
Peripheral nerve:Not detected
 

Antibody staining

Antibody HPA044121

  

Antibody HPA060118

  

Fibroblasts

 Not detected   Not detected  

Adipocytes

 Not detected  

Chondrocytes

 Not detected  

Peripheral nerve

 Not detected  
   
   
   

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Fibroblasts:Not detected
Peripheral nerve:Not detected
 
 

Antibody staining

Antibody HPA044121

  

Antibody HPA060118

  

Adipocytes

 Not detected   Not detected  

Fibroblasts

 Low   Not detected  

Peripheral nerve

 Not detected   Not detected  
      
   
   
   

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

57.5
N/A Female, age 80
Sample 1
TPM: 55.8
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45
Sample 2
TPM: 71.1
N/A Female, age 57
Sample 3
TPM: 68.1
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74
Sample 4
TPM: 52.2
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59
Sample 5
TPM: 40.1
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

55.8

GTEx sample id

RPKM
 

Adipose - Subcutaneous
Adipose - Subcutaneous
RPKM: 55.0
Samples: 350

Max RPKM: 149.3
Min RPKM: 27.1
Std RPKM: 16.7
Median RPKM: 52.5
GTEX-Y5V6-2526-SM-5IFJV 149.3
GTEX-ZDTT-2626-SM-5S2OP 108.6
GTEX-ZXES-2026-SM-5NQ6R 107.5
GTEX-ZVT2-2226-SM-5NQ6P 102.8
GTEX-PLZ6-1326-SM-3NB24 98.7
GTEX-R55G-2426-SM-2TC5I 94.9
GTEX-YB5E-2126-SM-5IFI7 94.5
GTEX-SUCS-1826-SM-32PM1 93.3
Show all
 

Adipose - Visceral (Omentum)
Adipose - Visceral (Omentum)
RPKM: 57.1
Samples: 227

Max RPKM: 122.5
Min RPKM: 21.9
Std RPKM: 18.5
Median RPKM: 55.8
GTEX-W5X1-1426-SM-3GIKH 122.5
GTEX-ZYFC-1826-SM-5GZZA 110.1
GTEX-145MF-1026-SM-5Q5EQ 109.5
GTEX-1313W-1626-SM-5J1OE 107.8
GTEX-1122O-0926-SM-5N9C9 103.0
GTEX-11EQ9-1126-SM-5987I 102.0
GTEX-12ZZX-1726-SM-5BC63 99.2
GTEX-ZF2S-1526-SM-5S2OO 95.5
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

74.3

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 74.3
FF:10010-101C1 65,65,76 years, mixed 74.3

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.