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SLC32A1
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TISSUE ATLAS PRIMARY DATA CAUDATE

GENE/PROTEIN

Antibody validation


Dictionary

Caudate

CAUDATE - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:19.4RPKM
FANTOM5:166.9Tags Per Million

CAUDATE - Annotated protein expression

Annotated protein
expression

Glial cells:Low
Neuronal cells:Low
 

Antibody staining

Antibody HPA058859

 

Antibody HPA059985

 

Antibody CAB037156

 

Glial cells

Not detected   Not detected   Not detected  

Neuronal cells

Not detected   Not detected   Low  
     
     
     

CAUDATE - HPA RNA-seq

Pending HPA RNA-seq analysis


CAUDATE - GTEx RNA-seq

Average RPKM

19.4

GTEx sample id

RPKM

 

Brain - Caudate (basal ganglia)

Brain - Caudate (basal ganglia)
RPKM: 19.4
Samples: 117

Max RPKM: 64.2
Min RPKM: 0.6
Std RPKM: 15.3
Median RPKM: 17.4
GTEX-13G51-0011-R5a-SM-5L3EB 64.2
GTEX-131YS-0011-R5b-SM-5K7YB 61.8
GTEX-1313W-0011-R5b-SM-5L3EP 50.6
GTEX-Q2AG-0011-R5A-SM-2HMJH 50.4
GTEX-WHSE-0011-R5A-SM-3P5ZO 48.5
GTEX-13O3Q-0011-R5b-SM-5P9H4 46.1
GTEX-145MH-0011-R5a-SM-5P9JT 45.4
GTEX-T6MN-0011-R5A-SM-32QPD 45.0
GTEX-S7SE-0011-R5A-SM-2XCDA 44.3
GTEX-UTHO-0011-R5A-SM-3GIJD 43.5
GTEX-T5JC-0011-R5A-SM-32PLK 42.7
GTEX-14BIM-0011-R5b-SM-5S2RM 42.4
GTEX-ZAB4-0011-R5a-SM-4SOKC 41.9
GTEX-12WSC-0011-R5b-SM-5CVNS 40.9
GTEX-145LS-0011-R5a-SM-5SI65 40.9
GTEX-12ZZY-0011-R5a-SM-5EGL9 39.5
GTEX-QVJO-0011-R5A-SM-2S1QM 38.9
GTEX-ZUA1-0011-R5b-SM-51MTG 38.8
GTEX-13RTJ-0011-R5a-SM-5P9HR 37.6
GTEX-13X6J-0011-R5b-SM-5PNWT 37.4
GTEX-11OF3-0011-R5a-SM-57WB4 37.1
GTEX-WL46-0011-R5A-SM-3LK6V 35.6
GTEX-13VXU-0011-R5a-SM-5O9D7 34.8
GTEX-13O3O-0011-R5b-SM-5KM44 33.7
GTEX-13SLX-0011-R5a-SM-5O9BV 33.7
GTEX-T2IS-0011-R5A-SM-32QP4 32.2
GTEX-1399T-0011-R5b-SM-5IJDK 31.9
GTEX-13X6K-0011-R5b-SM-5PNUE 31.2
GTEX-13N1W-0011-R5b-SM-5MR5Q 31.0
GTEX-13FHO-0011-R5b-SM-5LZZ3 29.9
GTEX-11GSP-0011-R5a-SM-57WBE 29.1
GTEX-N7MT-0011-R5a-SM-2I3G6 28.6
GTEX-WZTO-0011-R5B-SM-3NMC5 28.6
GTEX-14ABY-0011-R5b-SM-5SI7B 27.7
GTEX-WWYW-0011-R5A-SM-3NB3E 26.1
GTEX-N7MS-0011-R5a-SM-2HMK8 26.0
GTEX-13FXS-0011-R5b-SM-5LZYE 25.7
GTEX-RU72-0011-R5A-SM-2TF6U 25.3
GTEX-WVLH-0011-R5A-SM-3MJFW 25.0
GTEX-13OVL-0011-R5b-SM-5L3FU 23.2
GTEX-11H98-0011-R5b-SM-57WCF 23.1
GTEX-R55E-0011-R5A-SM-2TC5N 22.7
GTEX-P44H-0011-R5A-SM-2XCEX 22.6
GTEX-11NV4-0011-R5a-SM-5NQ88 22.5
GTEX-X585-0011-R5A-SM-46MVI 22.5
GTEX-13OW5-0011-R5b-SM-5L3FR 21.4
GTEX-13OW8-0011-R5b-SM-5L3FQ 21.4
GTEX-TSE9-0011-R5A-SM-3DB7J 21.3
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 21.1
GTEX-13NYS-0011-R5a-SM-5MR4D 21.1
GTEX-13FLW-0011-R5a-SM-5LZX6 20.5
GTEX-13S7M-0011-R5b-SM-5P9HS 20.5
GTEX-Z93S-0011-R5b-SM-4RGNI 20.2
GTEX-13JUV-0011-R5a-SM-5LZY5 19.8
GTEX-139TT-0011-R5b-SM-5K7W8 19.0
GTEX-132Q8-0011-R5a-SM-5IJDM 18.8
GTEX-ZE9C-0011-R5a-SM-5EGLO 18.6
GTEX-PVOW-0011-R5A-SM-32PL7 18.2
GTEX-12WSM-0011-R5a-SM-5EQ4Y 17.4
GTEX-13OW6-0011-R5a-SM-5O9BK 17.1
GTEX-12WSF-0011-R5a-SM-5HL8K 16.9
GTEX-13CZV-0011-R5a-SM-5K7XA 16.8
GTEX-13X6I-0011-R5a-SM-5PNWW 16.7
GTEX-13OW7-0011-R5b-SM-5O9DM 16.6
GTEX-12WSD-0011-R5b-SM-5CVNG 15.7
GTEX-Y8DK-0011-R5B-SM-4RTW6 14.7
GTEX-13NYB-0011-R5a-SM-5MR45 11.9
GTEX-NL3H-0011-R5a-SM-2I3GB 11.4
GTEX-13OVH-0011-R5b-SM-5KM4L 11.2
GTEX-RVPV-0011-R5A-SM-2TF69 10.8
GTEX-NL4W-0011-R5a-SM-2I3GD 10.7
GTEX-RVPU-0011-R5A-SM-2XCAD 10.2
GTEX-13CIG-0011-R5b-SM-5L3F2 8.9
GTEX-12ZZX-0011-R5a-SM-5HL89 8.8
GTEX-NPJ8-0011-R5a-SM-2HMJY 8.7
GTEX-13FLV-0011-R5a-SM-5LZWT 8.6
GTEX-XOTO-0011-R5A-SM-4B657 8.6
GTEX-ZE7O-0011-R5a-SM-57WBO 8.4
GTEX-12WSB-0011-R5b-SM-5GU67 8.3
GTEX-XMD1-0011-R5A-SM-4AT47 8.0
GTEX-ZXG5-0011-R5b-SM-57WBN 8.0
GTEX-12ZZW-0011-R5a-SM-5DUVN 7.8
GTEX-13JVG-0011-R5a-SM-5MR4O 7.2
GTEX-14BIN-0011-R5b-SM-5SI78 6.9
GTEX-YFC4-0011-R5a-SM-4RGLR 6.9
GTEX-ZF28-0011-R5a-SM-4WWCZ 6.9
GTEX-OXRN-0011-R5A-SM-2I5EF 6.1
GTEX-OHPN-0011-R5A-SM-2I5FF 6.0
GTEX-QMR6-0011-R5A-SM-32PKT 5.4
GTEX-YJ89-0011-R5a-SM-4V6GM 5.4
GTEX-13SLW-0011-R5b-SM-5SI6Z 4.9
GTEX-ZVZQ-0011-R5b-SM-57WDC 4.7
GTEX-X4XX-0011-R5A-SM-46MWN 4.2
GTEX-144GO-0011-R5a-SM-5PNUR 4.0
GTEX-PWO3-0011-R5A-SM-2I5EZ 3.7
GTEX-12WSH-0011-R5b-SM-5P9F3 3.5
GTEX-X261-0011-R5A-SM-3NMB4 3.3
GTEX-11WQC-0011-R5a-SM-5BC74 3.2
GTEX-13PVQ-0011-R5b-SM-5O9DI 3.1
GTEX-ZVT3-0011-R5a-SM-51MSI 2.8
GTEX-139TS-0011-R5b-SM-5J2MZ 2.6
GTEX-ZV68-0011-R5a-SM-4YCDW 2.6
GTEX-12WSA-0011-R5b-SM-5GU5I 2.5
GTEX-13112-0011-R5b-SM-5DUV8 2.5
GTEX-13PLJ-0011-R5a-SM-5O9BG 2.5
GTEX-13OVJ-0011-R5a-SM-5P9H7 2.2
GTEX-13FHP-0011-R5b-SM-5LZY2 2.1
GTEX-144GL-0011-R5b-SM-5PNUJ 2.1
GTEX-1445S-0011-R5a-SM-5PNUS 1.5
GTEX-NPJ7-0011-R5a-SM-33HBK 1.5
GTEX-1477Z-0011-R5b-SM-5PNUO 1.4
GTEX-11UD1-0011-R5b-SM-5P9FP 0.9
GTEX-13CF2-0011-R5a-SM-5LZWS 0.9
GTEX-13NZA-0011-R5b-SM-5KM4K 0.9
GTEX-S7PM-0011-R5A-SM-3NM8G 0.9
GTEX-145MG-0011-R5b-SM-5S2VU 0.7
GTEX-139T8-0011-R5b-SM-5J1MO 0.6
Show all

CAUDATE - FANTOM5 CAGE

Average Tags Per Million

166.9

FANTOM5 sample id

Sample description

Tags Per Million

Caudate nucleus
Tags Per Million: 166.9
FF:10379-105H1 89 years, female 197.1
FF:10164-103B2 76 years, female 136.7

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