We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
VAPA
  • TISSUE

  • premium

    CELL

  • CANCER

TISSUE ATLAS PRIMARY DATA CAUDATE

GENE/PROTEIN

Antibody validation


Dictionary

Caudate

CAUDATE - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:16.1RPKM
FANTOM5:244.8Tags Per Million

CAUDATE - Annotated protein expression

Annotated protein
expression

Glial cells:Medium
Neuronal cells:Medium
 

Antibody staining

Antibody HPA009174

 

Glial cells

Medium  

Neuronal cells

Medium  
 
 
 

CAUDATE - HPA RNA-seq

Pending HPA RNA-seq analysis


CAUDATE - GTEx RNA-seq

Average RPKM

16.1

GTEx sample id

RPKM

 

Brain - Caudate (basal ganglia)

Brain - Caudate (basal ganglia)
RPKM: 16.1
Samples: 117

Max RPKM: 37.1
Min RPKM: 5.7
Std RPKM: 4.3
Median RPKM: 16.3
GTEX-T2IS-0011-R5A-SM-32QP4 37.1
GTEX-P44H-0011-R5A-SM-2XCEX 27.5
GTEX-PVOW-0011-R5A-SM-32PL7 24.8
GTEX-12WSA-0011-R5b-SM-5GU5I 23.5
GTEX-139TT-0011-R5b-SM-5K7W8 23.5
GTEX-WWYW-0011-R5A-SM-3NB3E 23.1
GTEX-QVJO-0011-R5A-SM-2S1QM 22.9
GTEX-131YS-0011-R5b-SM-5K7YB 22.1
GTEX-ZAB4-0011-R5a-SM-4SOKC 22.0
GTEX-T6MN-0011-R5A-SM-32QPD 21.9
GTEX-12WSB-0011-R5b-SM-5GU67 20.7
GTEX-QMR6-0011-R5A-SM-32PKT 20.4
GTEX-UTHO-0011-R5A-SM-3GIJD 20.4
GTEX-WVLH-0011-R5A-SM-3MJFW 20.4
GTEX-12WSM-0011-R5a-SM-5EQ4Y 19.9
GTEX-11H98-0011-R5b-SM-57WCF 19.5
GTEX-WHSE-0011-R5A-SM-3P5ZO 19.5
GTEX-X585-0011-R5A-SM-46MVI 19.4
GTEX-N7MS-0011-R5a-SM-2HMK8 19.3
GTEX-12WSC-0011-R5b-SM-5CVNS 19.1
GTEX-13X6I-0011-R5a-SM-5PNWW 19.1
GTEX-S7SE-0011-R5A-SM-2XCDA 19.1
GTEX-NPJ8-0011-R5a-SM-2HMJY 18.8
GTEX-12WSF-0011-R5a-SM-5HL8K 18.7
GTEX-XMD1-0011-R5A-SM-4AT47 18.7
GTEX-N7MT-0011-R5a-SM-2I3G6 18.6
GTEX-145LS-0011-R5a-SM-5SI65 18.4
GTEX-13O3O-0011-R5b-SM-5KM44 18.3
GTEX-13G51-0011-R5a-SM-5L3EB 18.2
GTEX-Q2AG-0011-R5A-SM-2HMJH 18.2
GTEX-13OVJ-0011-R5a-SM-5P9H7 18.1
GTEX-132Q8-0011-R5a-SM-5IJDM 18.0
GTEX-1399T-0011-R5b-SM-5IJDK 18.0
GTEX-13N1W-0011-R5b-SM-5MR5Q 18.0
GTEX-WZTO-0011-R5B-SM-3NMC5 18.0
GTEX-ZUA1-0011-R5b-SM-51MTG 18.0
GTEX-WL46-0011-R5A-SM-3LK6V 17.8
GTEX-R55E-0011-R5A-SM-2TC5N 17.7
GTEX-TSE9-0011-R5A-SM-3DB7J 17.7
GTEX-1313W-0011-R5b-SM-5L3EP 17.6
GTEX-13FHO-0011-R5b-SM-5LZZ3 17.6
GTEX-X4XX-0011-R5A-SM-46MWN 17.6
GTEX-14BIM-0011-R5b-SM-5S2RM 17.5
GTEX-13NYS-0011-R5a-SM-5MR4D 17.4
GTEX-13X6K-0011-R5b-SM-5PNUE 17.4
GTEX-11GSP-0011-R5a-SM-57WBE 17.3
GTEX-11OF3-0011-R5a-SM-57WB4 17.2
GTEX-12ZZY-0011-R5a-SM-5EGL9 17.2
GTEX-14ABY-0011-R5b-SM-5SI7B 17.2
GTEX-13RTJ-0011-R5a-SM-5P9HR 17.0
GTEX-13JUV-0011-R5a-SM-5LZY5 16.9
GTEX-RU72-0011-R5A-SM-2TF6U 16.9
GTEX-13CZV-0011-R5a-SM-5K7XA 16.8
GTEX-145MH-0011-R5a-SM-5P9JT 16.8
GTEX-Y8DK-0011-R5B-SM-4RTW6 16.6
GTEX-13O3Q-0011-R5b-SM-5P9H4 16.5
GTEX-13OW6-0011-R5a-SM-5O9BK 16.4
GTEX-PWO3-0011-R5A-SM-2I5EZ 16.4
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 16.3
GTEX-11NV4-0011-R5a-SM-5NQ88 16.1
GTEX-13X6J-0011-R5b-SM-5PNWT 16.1
GTEX-T5JC-0011-R5A-SM-32PLK 16.1
GTEX-RVPU-0011-R5A-SM-2XCAD 15.9
GTEX-NL4W-0011-R5a-SM-2I3GD 15.8
GTEX-Z93S-0011-R5b-SM-4RGNI 15.8
GTEX-ZE9C-0011-R5a-SM-5EGLO 15.8
GTEX-13SLW-0011-R5b-SM-5SI6Z 15.6
GTEX-144GO-0011-R5a-SM-5PNUR 15.6
GTEX-13FXS-0011-R5b-SM-5LZYE 15.5
GTEX-13JVG-0011-R5a-SM-5MR4O 15.3
GTEX-13SLX-0011-R5a-SM-5O9BV 15.3
GTEX-13VXU-0011-R5a-SM-5O9D7 15.3
GTEX-13OW8-0011-R5b-SM-5L3FQ 15.1
GTEX-RVPV-0011-R5A-SM-2TF69 15.0
GTEX-13FLV-0011-R5a-SM-5LZWT 14.8
GTEX-12WSD-0011-R5b-SM-5CVNG 14.6
GTEX-13OVL-0011-R5b-SM-5L3FU 14.5
GTEX-OHPN-0011-R5A-SM-2I5FF 14.5
GTEX-11WQC-0011-R5a-SM-5BC74 14.4
GTEX-ZE7O-0011-R5a-SM-57WBO 14.4
GTEX-ZF28-0011-R5a-SM-4WWCZ 14.3
GTEX-13FLW-0011-R5a-SM-5LZX6 14.2
GTEX-13OW7-0011-R5b-SM-5O9DM 14.1
GTEX-X261-0011-R5A-SM-3NMB4 14.0
GTEX-13NYB-0011-R5a-SM-5MR45 13.9
GTEX-13OW5-0011-R5b-SM-5L3FR 13.8
GTEX-NL3H-0011-R5a-SM-2I3GB 13.8
GTEX-ZXG5-0011-R5b-SM-57WBN 13.8
GTEX-13OVH-0011-R5b-SM-5KM4L 13.7
GTEX-NPJ7-0011-R5a-SM-33HBK 13.7
GTEX-13S7M-0011-R5b-SM-5P9HS 13.5
GTEX-XOTO-0011-R5A-SM-4B657 13.3
GTEX-1445S-0011-R5a-SM-5PNUS 13.0
GTEX-YFC4-0011-R5a-SM-4RGLR 13.0
GTEX-13CIG-0011-R5b-SM-5L3F2 12.9
GTEX-13PVQ-0011-R5b-SM-5O9DI 12.8
GTEX-14BIN-0011-R5b-SM-5SI78 12.7
GTEX-ZVZQ-0011-R5b-SM-57WDC 12.0
GTEX-12ZZW-0011-R5a-SM-5DUVN 11.9
GTEX-ZV68-0011-R5a-SM-4YCDW 11.9
GTEX-OXRN-0011-R5A-SM-2I5EF 11.4
GTEX-12ZZX-0011-R5a-SM-5HL89 11.3
GTEX-139TS-0011-R5b-SM-5J2MZ 11.2
GTEX-12WSH-0011-R5b-SM-5P9F3 10.7
GTEX-ZVT3-0011-R5a-SM-51MSI 10.5
GTEX-13PLJ-0011-R5a-SM-5O9BG 10.3
GTEX-13112-0011-R5b-SM-5DUV8 9.7
GTEX-S7PM-0011-R5A-SM-3NM8G 9.7
GTEX-139T8-0011-R5b-SM-5J1MO 9.2
GTEX-144GL-0011-R5b-SM-5PNUJ 9.1
GTEX-13FHP-0011-R5b-SM-5LZY2 8.9
GTEX-YJ89-0011-R5a-SM-4V6GM 8.9
GTEX-11UD1-0011-R5b-SM-5P9FP 8.2
GTEX-1477Z-0011-R5b-SM-5PNUO 8.0
GTEX-13CF2-0011-R5a-SM-5LZWS 7.3
GTEX-145MG-0011-R5b-SM-5S2VU 6.4
GTEX-13NZA-0011-R5b-SM-5KM4K 5.7
Show all

CAUDATE - FANTOM5 CAGE

Average Tags Per Million

244.8

FANTOM5 sample id

Sample description

Tags Per Million

Caudate nucleus
Tags Per Million: 244.8
FF:10379-105H1 89 years, female 258.2
FF:10164-103B2 76 years, female 231.4

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.