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TISSUE ATLAS PRIMARY DATA HIPPOCAMPUS

GENE/PROTEIN

Antibody validation


Dictionary

Hippocampus

HIPPOCAMPUS - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:20.0RPKM
FANTOM5:74.0Tags Per Million

HIPPOCAMPUS - Annotated protein expression

Annotated protein
expression

Glial cells:Low
Neuronal cells:Low
 

Antibody staining

Antibody HPA000609

 

Antibody CAB001545

 

Antibody CAB002029

 

Antibody CAB062552

 

Glial cells

Low   Not detected   Medium   Not detected  

Neuronal cells

Medium   Not detected   Low   Low  
       
       
       

HIPPOCAMPUS - HPA RNA-seq

Pending HPA RNA-seq analysis


HIPPOCAMPUS - GTEx RNA-seq

Average RPKM

20.0

GTEx sample id

RPKM

 

Brain - Hippocampus

Brain - Hippocampus
RPKM: 20.0
Samples: 94

Max RPKM: 46.5
Min RPKM: 7.5
Std RPKM: 7.1
Median RPKM: 19.4
GTEX-13N1W-0011-R1b-SM-5MR4T 46.5
GTEX-13OVJ-0011-R1b-SM-5L3I6 41.9
GTEX-13NYS-0011-R1b-SM-5MR55 37.0
GTEX-13JUV-0011-R1a-SM-5LZY4 35.2
GTEX-13OW5-0011-R1b-SM-5L3GE 33.3
GTEX-13FHO-0011-R1b-SM-5KLZG 33.2
GTEX-12ZZX-0011-R1a-SM-5EQ6B 30.4
GTEX-13G51-0011-R1a-SM-5LZYR 29.7
GTEX-13O3O-0011-R1b-SM-5KM2K 28.9
GTEX-WHSE-0011-R1A-SM-3P5ZK 28.9
GTEX-QVUS-0011-R1A-SM-3GAD2 28.2
GTEX-13RTJ-0011-R1a-SM-5O9D9 27.8
GTEX-X585-0011-R1B-SM-46MVE 26.8
GTEX-N7MS-0011-R1a-SM-2HMJG 25.9
GTEX-TSE9-0011-R1A-SM-3DB7E 25.7
GTEX-13FXS-0011-R1a-SM-5K7U6 25.2
GTEX-XOTO-0011-R1B-SM-4B65C 25.1
GTEX-T5JC-0011-R1A-SM-32PM6 24.8
GTEX-13OW7-0011-R1b-SM-5L3HF 24.4
GTEX-13JVG-0011-R1a-SM-5KM32 23.7
GTEX-12WSE-0011-R1b-SM-5GU4V 23.6
GTEX-139TT-0011-R1a-SM-5LZVD 23.5
GTEX-13QIC-0011-R1a-SM-5O9CJ 23.5
GTEX-ZAB4-0011-R1a-SM-4RGNO 23.4
GTEX-WL46-0011-R1A-SM-3LK6M 23.1
GTEX-144GL-0011-R1a-SM-5PNZ5 23.1
GTEX-13O3Q-0011-R1b-SM-5KM3L 23.1
GTEX-13FLW-0011-R1b-SM-5LZX2 23.1
GTEX-N7MT-0011-R1a-SM-5SI7S 22.7
GTEX-132Q8-0011-R1a-SM-5EGLK 22.7
GTEX-13OVL-0011-R1a-SM-5L3H5 22.4
GTEX-13RTL-0011-R1a-SM-5PNZ8 22.3
GTEX-131XH-0011-R1a-SM-5DUWA 22.3
GTEX-Q2AG-0011-R1A-SM-2HMJI 22.3
GTEX-131YS-0011-R1a-SM-5DUXC 21.5
GTEX-WWYW-0011-R1A-SM-3TW8G 21.3
GTEX-13N2G-0011-R1b-SM-5MR3G 21.3
GTEX-1399T-0011-R1b-SM-5DUWN 21.2
GTEX-QVJO-0011-R1A-SM-2S1QI 21.1
GTEX-T6MN-0011-R1A-SM-32QOY 21.0
GTEX-P44H-0011-R1A-SM-3NM8J 20.8
GTEX-13OW6-0011-R1a-SM-5L3HQ 20.7
GTEX-12WSF-0011-R1a-SM-5DUVI 20.5
GTEX-S7SE-0011-R1A-SM-2XCDE 20.2
GTEX-YFC4-0011-R1a-SM-4V6EH 20.1
GTEX-12WSD-0011-R1b-SM-5LZVY 19.4
GTEX-WVLH-0011-R1A-SM-4MVOK 19.4
GTEX-13NYB-0011-R1b-SM-5KM4F 19.4
GTEX-ZUA1-0011-R1a-SM-4YCE2 19.3
GTEX-XMD1-0011-R1A-SM-4AT4C 19.0
GTEX-NPJ7-0011-R1a-SM-3GACT 18.9
GTEX-RNOR-0011-R1A-SM-5SI8F 18.6
GTEX-1313W-0011-R1b-SM-5EQ4A 18.6
GTEX-13X6I-0011-R1b-SM-5PNZC 18.1
GTEX-WZTO-0011-R1B-SM-3NMAR 18.1
GTEX-12WSM-0011-R1a-SM-5LZW6 18.1
GTEX-145LS-0011-R1b-SM-5PNUP 18.0
GTEX-11ONC-0011-R1a-SM-57WD4 17.8
GTEX-145MH-0011-R1b-SM-5PNWY 17.5
GTEX-14ASI-0011-R1b-SM-5S2TY 17.5
GTEX-11GSO-0011-R1b-SM-57WD3 17.1
GTEX-12WSH-0011-R1a-SM-5GU5V 17.0
GTEX-PVOW-0011-R1A-SM-32PL6 16.9
GTEX-13S7M-0011-R1b-SM-5PNZE 16.9
GTEX-13QJC-0011-R1b-SM-5S2UU 16.9
GTEX-13OW8-0011-R1a-SM-5L3HI 16.7
GTEX-R55E-0011-R1A-SM-2TC6N 16.3
GTEX-QDT8-0011-R1A-SM-32PKS 16.2
GTEX-X4XX-0011-R1B-SM-3P622 15.6
GTEX-QMR6-0011-R1A-SM-32PKW 15.4
GTEX-11ZVC-0011-R1b-SM-5BC6M 15.3
GTEX-13NZA-0011-R1b-SM-5LUAF 15.3
GTEX-13112-0011-R1b-SM-5HL7K 15.2
GTEX-PWO3-0011-R1A-SM-2I5EW 15.0
GTEX-11UD1-0011-R1b-SM-5BC7D 15.0
GTEX-139T8-0011-R1a-SM-5HL75 14.5
GTEX-1212Z-0011-R1b-SM-5BC72 14.3
GTEX-12WSB-0011-R1b-SM-5P9EY 13.9
GTEX-13SLW-0011-R1a-SM-5S2W7 13.4
GTEX-Y8DK-0011-R1A-SM-4RGLO 12.3
GTEX-13CF2-0011-R1a-SM-5LZY1 12.0
GTEX-11ZTS-0011-R1a-SM-5BC71 12.0
GTEX-ZVZQ-0011-R1a-SM-57WBU 11.8
GTEX-UTHO-0011-R1A-SM-3GIJO 11.0
GTEX-NL3H-0011-R1a-SM-48TDJ 10.6
GTEX-13PDP-0011-R1a-SM-5PNX5 10.5
GTEX-145LU-0011-R1a-SM-5Q5CE 10.5
GTEX-13FHP-0011-R1b-SM-5K7XL 10.4
GTEX-ZF28-0011-R1a-SM-4WWD1 9.5
GTEX-YJ89-0011-R1a-SM-4RGLS 9.2
GTEX-NPJ8-0011-R1a-SM-33HCB 8.1
GTEX-13FTY-0011-R1a-SM-5LZXE 8.0
GTEX-144GO-0011-R1a-SM-5PNWO 7.7
GTEX-ZE7O-0011-R1a-SM-57WDM 7.5
Show all

HIPPOCAMPUS - FANTOM5 CAGE

Average Tags Per Million

74.0

FANTOM5 sample id

Sample description

Tags Per Million

Hippocampus
Tags Per Million: 74.0
FF:10374-105G5 89 years, female 82.6
FF:10169-103B7 60 years, female 72.8
FF:10153-102I9 76 years, female 66.7

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