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TISSUE ATLAS PRIMARY DATA LIVER

GENE/PROTEIN

Antibody validation


Dictionary

Liver

Tissue proteome

Liver

LIVER - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:7.2TPM
GTEx:18.6RPKM
FANTOM5:75.1Tags Per Million

LIVER - Annotated protein expression

Annotated protein
expression

Bile duct cells:Medium
Hepatocytes:Low
 

Antibody staining

Antibody HPA000609

 

Antibody CAB001545

 

Antibody CAB002029

 

Antibody CAB062552

 

Bile duct cells

Low   Medium   Medium   Not detected  

Hepatocytes

Not detected   Low   Not detected   Not detected  
       
       
       

LIVER - HPA RNA-seq

Average TPM

7.2

N/A Female, age 60
Sample 1
TPM: 12.0
overview Male, age 54
Sample 2
TPM: 12.3
Cell types%
Hepatocytes: 80
Fibroblasts: 15
Other cell types: 5
overview Male, age 74
Sample 3
TPM: 8.8
Cell types%
Hepatocytes: 85
Fibroblasts: 5
Other cell types: 10
overview Female, age 62
Sample 4
TPM: 1.0
Cell types%
Hepatocytes: 70
Fibroblasts: 10
Other cell types: 20
overview Male, age 78
Sample 5
TPM: 2.9
Cell types%
Hepatocytes: 75
Fibroblasts: 5
Other cell types: 20
overview Male, age 53
Sample 6
TPM: 4.9
Cell types%
Hepatocytes: 80
Fibroblasts: 5
Other cell types: 15
overview Male, age 77
Sample 7
TPM: 6.0
Cell types%
Hepatocytes: 75
Fibroblasts: 5
Other cell types: 20
overview Female, age 72
Sample 8
TPM: 8.0
Cell types%
Hepatocytes: 50
Fibroblasts: 10
Other cell types: 40
overview Male, age 70
Sample 9
TPM: 4.7
Cell types%
Hepatocytes: 65
Fibroblasts: 10
Other cell types: 25
overview Female, age 23
Sample 10
TPM: 11.7
Cell types%
Hepatocytes: 70
Fibroblasts: 5
Other cell types: 25

LIVER - GTEx RNA-seq

Average RPKM

18.6

GTEx sample id

RPKM

 

Liver

Liver
RPKM: 18.6
Samples: 119

Max RPKM: 40.1
Min RPKM: 9.3
Std RPKM: 5.2
Median RPKM: 17.4
GTEX-ZVT4-0626-SM-5E45T 40.1
GTEX-RWSA-1426-SM-47JXA 32.2
GTEX-14C38-1526-SM-5RQJ7 31.0
GTEX-UTHO-2426-SM-4JBHD 30.9
GTEX-131XE-0326-SM-5LZVO 30.5
GTEX-147F4-1426-SM-5LUA8 29.3
GTEX-X4XY-1626-SM-46MVN 28.7
GTEX-12WSG-0626-SM-5FQTQ 28.5
GTEX-YFC4-1526-SM-5IFJS 28.2
GTEX-ZTPG-1426-SM-51MT3 28.1
GTEX-12KS4-1326-SM-5LUB3 27.2
GTEX-11GSP-0626-SM-5986T 27.0
GTEX-YB5E-0326-SM-5IFHU 26.1
GTEX-QDVN-0826-SM-48TZ2 25.6
GTEX-ZYY3-0626-SM-5NQ6W 25.5
GTEX-REY6-1226-SM-48FDR 25.4
GTEX-13N11-0926-SM-5IJG2 25.1
GTEX-13NZ9-1326-SM-5MR3V 25.1
GTEX-XOTO-0826-SM-4B65O 25.1
GTEX-ZAB4-0826-SM-5LU9D 25.0
GTEX-S32W-1926-SM-4AD63 24.8
GTEX-1269C-0626-SM-5FQSS 22.8
GTEX-13FLV-0326-SM-5N9DJ 22.5
GTEX-UPIC-0926-SM-4IHLV 22.5
GTEX-X4EP-1026-SM-4QAS5 22.3
GTEX-T6MN-1226-SM-3NMA5 22.2
GTEX-RU72-1426-SM-46MUF 21.6
GTEX-X4EO-1126-SM-4QARQ 21.3
GTEX-13O3O-1826-SM-5IFGW 21.2
GTEX-147JS-1126-SM-5RQIW 20.9
GTEX-13PVR-0126-SM-5S2PY 20.7
GTEX-1212Z-0226-SM-59HLF 20.2
GTEX-RN64-1826-SM-48FDV 20.1
GTEX-Y5LM-0426-SM-4VBRO 19.9
GTEX-13FTW-1126-SM-5J2NV 19.8
GTEX-146FH-1526-SM-5NQBU 19.8
GTEX-11ZVC-0726-SM-5FQT9 19.5
GTEX-13QJC-0726-SM-5RQJK 19.4
GTEX-144GM-1326-SM-5LU5E 19.3
GTEX-Y5V5-0926-SM-4VBPZ 19.3
GTEX-139TU-0826-SM-5IJFG 19.0
GTEX-1497J-0726-SM-5Q5D1 18.9
GTEX-QESD-2026-SM-447BI 18.8
GTEX-YECK-1926-SM-4W21H 18.6
GTEX-11ZTS-1426-SM-5EQMM 18.5
GTEX-132NY-0926-SM-5P9G3 18.5
GTEX-13SLX-1226-SM-5S2Q6 18.5
GTEX-11WQC-0726-SM-5EQMR 18.3
GTEX-RTLS-1326-SM-46MUN 18.3
GTEX-S33H-1626-SM-4AD68 18.3
GTEX-11ZUS-2526-SM-59872 18.2
GTEX-12696-0826-SM-5EGGE 18.2
GTEX-QEL4-1226-SM-447A4 18.2
GTEX-13113-1326-SM-5GCOI 18.1
GTEX-QEG4-1826-SM-4R1JN 18.0
GTEX-12WSD-1426-SM-5GCN9 17.8
GTEX-131YS-1626-SM-5HL6C 17.8
GTEX-ZF29-2026-SM-4WWB7 17.5
GTEX-145MO-2326-SM-5NQ9K 17.4
GTEX-XBEC-1526-SM-4AT68 17.4
GTEX-145MF-0826-SM-5QGQA 17.3
GTEX-P78B-1326-SM-3P611 17.3
GTEX-PX3G-0826-SM-48TZS 17.2
GTEX-WYVS-1926-SM-4PQZ2 17.2
GTEX-WZTO-0626-SM-4PQYY 17.1
GTEX-11NV4-1326-SM-5HL6V 16.8
GTEX-12WSM-0726-SM-5GCOW 16.8
GTEX-SJXC-1226-SM-4DM78 16.6
GTEX-139YR-0226-SM-5IFEM 16.5
GTEX-ZVT3-1626-SM-5GU66 16.3
GTEX-145LU-1326-SM-5LU9N 16.2
GTEX-X261-1726-SM-4PQYT 16.2
GTEX-14DAQ-1726-SM-5S2R2 16.1
GTEX-Q2AG-1126-SM-48U1P 16.1
GTEX-11DXY-0526-SM-5EGGQ 15.9
GTEX-12WSI-0226-SM-5GCNA 15.9
GTEX-13N2G-0926-SM-5IFGJ 15.9
GTEX-S4Z8-0526-SM-4AD4T 15.9
GTEX-ZYT6-0626-SM-5E45V 15.9
GTEX-TKQ2-1726-SM-4DXUP 15.8
GTEX-RNOR-1426-SM-48FDJ 15.7
GTEX-11OF3-0726-SM-5BC4Z 15.6
GTEX-13112-1426-SM-5EGH8 15.6
GTEX-11NUK-1226-SM-5P9GM 15.5
GTEX-13NYB-1026-SM-5IFH3 15.5
GTEX-14A5I-1726-SM-5QGQ5 15.2
GTEX-14753-1626-SM-5NQ9L 15.1
GTEX-13FTZ-0726-SM-5IFFY 15.0
GTEX-RM2N-1926-SM-48FCU 15.0
GTEX-11EQ9-0526-SM-5A5JZ 14.8
GTEX-Q734-0326-SM-48U15 14.7
GTEX-1399T-0826-SM-5IFES 14.6
GTEX-R53T-0326-SM-48FEC 14.6
GTEX-ZVP2-0626-SM-51MSO 14.6
GTEX-139TS-1426-SM-5IFJD 14.5
GTEX-YEC4-0826-SM-5P9FV 14.5
GTEX-12WSL-0226-SM-5CVMJ 14.4
GTEX-13OW6-2626-SM-5IFF2 14.4
GTEX-1399R-1226-SM-5P9GF 14.1
GTEX-ZZPU-0426-SM-5GZYH 14.1
GTEX-14AS3-0126-SM-5Q5F4 14.0
GTEX-VUSG-0126-SM-4KL1X 13.9
GTEX-13NZB-0626-SM-5IFH6 13.8
GTEX-11DXZ-0126-SM-5EGGY 13.6
GTEX-14E1K-0326-SM-5S2PE 13.6
GTEX-WQUQ-1926-SM-4OOSA 13.6
GTEX-X3Y1-2726-SM-4PQZH 13.6
GTEX-Z9EW-0426-SM-5CVM9 13.5
GTEX-WFON-1726-SM-4LVMQ 13.2
GTEX-131XH-0626-SM-5LZWH 13.0
GTEX-U3ZN-0226-SM-3DB8D 13.0
GTEX-ZF2S-3026-SM-4WWCH 12.8
GTEX-QV44-0326-SM-4R1KD 12.6
GTEX-UPK5-1426-SM-4JBHH 12.6
GTEX-OOBJ-0826-SM-3NB2K 11.9
GTEX-13VXU-0926-SM-5IFFH 11.8
GTEX-ZAB5-0426-SM-5CVMI 11.6
GTEX-ZPU1-0826-SM-57WG2 11.5
GTEX-12ZZZ-1326-SM-59HKW 9.3
Show all

LIVER - FANTOM5 CAGE

Average Tags Per Million

75.1

FANTOM5 sample id

Sample description

Tags Per Million

Liver
Tags Per Million: 75.1
FF:10018-101C9 64,69,70 years, mixed 75.1

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