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RNF40

SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:27.3TPM
GTEx:15.3RPKM
FANTOM5:31.7Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Chondrocytes:Not detected
Fibroblasts:Not detected
Peripheral nerve:Low
 

Antibody staining

Antibody HPA041330

  

Adipocytes

 Not detected  

Chondrocytes

 Not detected  

Fibroblasts

 Not detected  

Peripheral nerve

 Low  
 
 
 

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Chondrocytes:Not detected
Fibroblasts:Medium
Peripheral nerve:Not detected
 

Antibody staining

Antibody HPA041330

  

Adipocytes

 Not detected  

Chondrocytes

 Not detected  

Fibroblasts

 Medium  

Peripheral nerve

 Not detected  
 
 
 

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

27.3
N/A Female, age 80
Sample 1
TPM: 36.4
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45
Sample 2
TPM: 19.1
N/A Female, age 57
Sample 3
TPM: 19.6
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74
Sample 4
TPM: 34.7
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59
Sample 5
TPM: 26.5
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

15.3

GTEx sample id

RPKM
 

Adipose - Subcutaneous
Adipose - Subcutaneous
RPKM: 15.9
Samples: 350

Max RPKM: 21.2
Min RPKM: 7.3
Std RPKM: 1.9
Median RPKM: 16
GTEX-OIZH-0226-SM-2YUMH 21.2
GTEX-OXRO-0226-SM-3LK6F 20.9
GTEX-131XE-2426-SM-5EQ5V 20.7
GTEX-148VI-1726-SM-5S2W9 20.4
GTEX-111CU-1826-SM-5GZYN 20.1
GTEX-P4QR-0426-SM-2S1NV 20.0
GTEX-XQ8I-0526-SM-4BOPS 19.9
GTEX-OOBJ-0226-SM-2YUMM 19.8
Show all
 

Adipose - Visceral (Omentum)
Adipose - Visceral (Omentum)
RPKM: 14.4
Samples: 227

Max RPKM: 21.4
Min RPKM: 9.7
Std RPKM: 1.9
Median RPKM: 14.2
GTEX-13S86-0926-SM-5SI6I 21.4
GTEX-131XE-2026-SM-5LZW1 19.3
GTEX-145ME-0726-SM-5O9A3 18.9
GTEX-14DAQ-2526-SM-5RQIO 18.8
GTEX-ZAJG-1626-SM-5HL7I 18.7
GTEX-ZUA1-2126-SM-57YRB 18.4
GTEX-YJ89-1926-SM-5IFJ6 18.2
GTEX-11NUK-2026-SM-5PNVZ 18.0
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

31.7

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 31.7
FF:10010-101C1 65,65,76 years, mixed 31.7

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.