Tissue expression of RNF40 - Staining in esophagus

ESOPHAGUS - Expression summary

Protein expression

RNA expression

HPA:	32.4	TPM
GTEx:	15.7	RPKM
FANTOM5:	29.9	Tags Per Million

ESOPHAGUS - Annotated protein expression

Annotated protein
expression

Squamous epithelial cells:

Low

Antibody staining	Antibody HPA041330
Squamous epithelial cells	Low

ESOPHAGUS - HPA RNA-seq

Average TPM	32.4

Female, age 70

Sample 1
TPM: 30.8

Cell types%

Squamous epithelial cells: 35
Smooth muscle cells: 15
Skeletal muscle cells: 5
Other cell types: 45

Male, age 38

Sample 2
TPM: 28.8

Cell types%

Squamous epithelial cells: 60
Smooth muscle cells: 20
Other cell types: 20

Male, age 76

Sample 3
TPM: 37.5

Cell types%

Squamous epithelial cells: 45
Smooth muscle cells: 15
Other cell types: 40

ESOPHAGUS - GTEx RNA-seq

Average RPKM	15.7

GTEx sample id

RPKM

Esophagus - Mucosa

Esophagus - Mucosa
RPKM: 15.7

Samples: 286

Max RPKM: 21.3
Min RPKM: 10.2
Std RPKM: 1.6
Median RPKM: 15.7

GTEX-RUSQ-0826-SM-47JWW

21.3

GTEX-13S86-0826-SM-5SI6J

20.6

GTEX-132AR-2226-SM-5J2NT

19.6

GTEX-P4QS-0626-SM-3NMD1

19.5

GTEX-QDVN-1026-SM-48TZA

19.5

GTEX-NPJ8-1926-SM-3MJGB

19.4

GTEX-QEL4-1426-SM-447AC

19.4

GTEX-S32W-0926-SM-4AD5X

19.3

Show all

ESOPHAGUS - FANTOM5 CAGE

Average Tags Per Million	29.9

FANTOM5 sample id

Sample description

Tags Per Million

Esophagus
Tags Per Million: 29.9

FF:10015-101C6

68,74,75 years, mixed

29.9