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TISSUE ATLAS PRIMARY DATA CAUDATE

GENE/PROTEIN

Antibody validation


Dictionary

Caudate

CAUDATE - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:46.2RPKM
FANTOM5:434.8Tags Per Million

CAUDATE - Annotated protein expression

Annotated protein
expression

Glial cells:Not detected
Neuronal cells:Not detected
 

Antibody staining

Antibody HPA023099

 

Antibody HPA056734

 

Antibody CAB002138

 

Glial cells

Not detected   Not detected   Not detected  

Neuronal cells

Medium   Not detected   Not detected  
     
     
     

CAUDATE - HPA RNA-seq

Pending HPA RNA-seq analysis


CAUDATE - GTEx RNA-seq

Average RPKM

46.2

GTEx sample id

RPKM

 

Brain - Caudate (basal ganglia)

Brain - Caudate (basal ganglia)
RPKM: 46.2
Samples: 117

Max RPKM: 306.7
Min RPKM: 1.4
Std RPKM: 46.8
Median RPKM: 33.2
GTEX-T2IS-0011-R5A-SM-32QP4 306.7
GTEX-131YS-0011-R5b-SM-5K7YB 179.4
GTEX-13G51-0011-R5a-SM-5L3EB 156.2
GTEX-1313W-0011-R5b-SM-5L3EP 155.7
GTEX-11OF3-0011-R5a-SM-57WB4 151.8
GTEX-12WSC-0011-R5b-SM-5CVNS 138.1
GTEX-S7SE-0011-R5A-SM-2XCDA 137.6
GTEX-T6MN-0011-R5A-SM-32QPD 125.2
GTEX-Q2AG-0011-R5A-SM-2HMJH 115.8
GTEX-PVOW-0011-R5A-SM-32PL7 110.2
GTEX-13X6J-0011-R5b-SM-5PNWT 104.9
GTEX-12ZZY-0011-R5a-SM-5EGL9 104.1
GTEX-P44H-0011-R5A-SM-2XCEX 102.4
GTEX-ZUA1-0011-R5b-SM-51MTG 101.2
GTEX-UTHO-0011-R5A-SM-3GIJD 94.4
GTEX-T5JC-0011-R5A-SM-32PLK 93.5
GTEX-145MH-0011-R5a-SM-5P9JT 93.1
GTEX-13N1W-0011-R5b-SM-5MR5Q 92.6
GTEX-WHSE-0011-R5A-SM-3P5ZO 90.7
GTEX-WL46-0011-R5A-SM-3LK6V 86.9
GTEX-WVLH-0011-R5A-SM-3MJFW 84.6
GTEX-1399T-0011-R5b-SM-5IJDK 81.7
GTEX-13O3Q-0011-R5b-SM-5P9H4 81.0
GTEX-13VXU-0011-R5a-SM-5O9D7 79.6
GTEX-WZTO-0011-R5B-SM-3NMC5 77.1
GTEX-14ABY-0011-R5b-SM-5SI7B 76.2
GTEX-13SLX-0011-R5a-SM-5O9BV 73.8
GTEX-RU72-0011-R5A-SM-2TF6U 65.9
GTEX-N7MS-0011-R5a-SM-2HMK8 65.2
GTEX-12WSM-0011-R5a-SM-5EQ4Y 61.7
GTEX-ZE9C-0011-R5a-SM-5EGLO 61.6
GTEX-WWYW-0011-R5A-SM-3NB3E 59.4
GTEX-Y8DK-0011-R5B-SM-4RTW6 57.0
GTEX-ZAB4-0011-R5a-SM-4SOKC 56.4
GTEX-TSE9-0011-R5A-SM-3DB7J 54.6
GTEX-12WSF-0011-R5a-SM-5HL8K 54.2
GTEX-12WSD-0011-R5b-SM-5CVNG 53.4
GTEX-11H98-0011-R5b-SM-57WCF 53.2
GTEX-145LS-0011-R5a-SM-5SI65 52.8
GTEX-R55E-0011-R5A-SM-2TC5N 50.6
GTEX-11GSP-0011-R5a-SM-57WBE 48.4
GTEX-13RTJ-0011-R5a-SM-5P9HR 48.3
GTEX-13OVL-0011-R5b-SM-5L3FU 48.2
GTEX-Z93S-0011-R5b-SM-4RGNI 47.1
GTEX-139TT-0011-R5b-SM-5K7W8 46.7
GTEX-13FXS-0011-R5b-SM-5LZYE 46.2
GTEX-13OW6-0011-R5a-SM-5O9BK 45.9
GTEX-13FLW-0011-R5a-SM-5LZX6 44.5
GTEX-14BIM-0011-R5b-SM-5S2RM 44.4
GTEX-13FHO-0011-R5b-SM-5LZZ3 42.4
GTEX-13OW7-0011-R5b-SM-5O9DM 42.3
GTEX-QVJO-0011-R5A-SM-2S1QM 42.1
GTEX-13O3O-0011-R5b-SM-5KM44 41.7
GTEX-ZE7O-0011-R5a-SM-57WBO 41.2
GTEX-11NV4-0011-R5a-SM-5NQ88 41.1
GTEX-N7MT-0011-R5a-SM-2I3G6 39.7
GTEX-132Q8-0011-R5a-SM-5IJDM 34.6
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 34.3
GTEX-13CZV-0011-R5a-SM-5K7XA 33.2
GTEX-13OW8-0011-R5b-SM-5L3FQ 31.6
GTEX-13X6K-0011-R5b-SM-5PNUE 29.8
GTEX-NL4W-0011-R5a-SM-2I3GD 28.7
GTEX-RVPU-0011-R5A-SM-2XCAD 28.6
GTEX-XOTO-0011-R5A-SM-4B657 25.6
GTEX-13OVH-0011-R5b-SM-5KM4L 24.1
GTEX-13FLV-0011-R5a-SM-5LZWT 24.0
GTEX-13S7M-0011-R5b-SM-5P9HS 22.9
GTEX-13NYS-0011-R5a-SM-5MR4D 22.4
GTEX-13JUV-0011-R5a-SM-5LZY5 21.2
GTEX-ZVZQ-0011-R5b-SM-57WDC 21.0
GTEX-13NYB-0011-R5a-SM-5MR45 20.8
GTEX-13OW5-0011-R5b-SM-5L3FR 20.2
GTEX-XMD1-0011-R5A-SM-4AT47 20.1
GTEX-YFC4-0011-R5a-SM-4RGLR 19.5
GTEX-OXRN-0011-R5A-SM-2I5EF 19.2
GTEX-PWO3-0011-R5A-SM-2I5EZ 17.6
GTEX-ZXG5-0011-R5b-SM-57WBN 17.5
GTEX-13X6I-0011-R5a-SM-5PNWW 16.9
GTEX-12ZZW-0011-R5a-SM-5DUVN 16.5
GTEX-12ZZX-0011-R5a-SM-5HL89 16.3
GTEX-14BIN-0011-R5b-SM-5SI78 16.1
GTEX-RVPV-0011-R5A-SM-2TF69 15.0
GTEX-ZF28-0011-R5a-SM-4WWCZ 14.9
GTEX-NL3H-0011-R5a-SM-2I3GB 14.7
GTEX-NPJ8-0011-R5a-SM-2HMJY 14.6
GTEX-QMR6-0011-R5A-SM-32PKT 13.7
GTEX-13PVQ-0011-R5b-SM-5O9DI 13.5
GTEX-YJ89-0011-R5a-SM-4V6GM 13.4
GTEX-12WSB-0011-R5b-SM-5GU67 12.9
GTEX-13JVG-0011-R5a-SM-5MR4O 12.4
GTEX-ZV68-0011-R5a-SM-4YCDW 12.0
GTEX-X585-0011-R5A-SM-46MVI 10.9
GTEX-13CIG-0011-R5b-SM-5L3F2 10.7
GTEX-11WQC-0011-R5a-SM-5BC74 8.5
GTEX-OHPN-0011-R5A-SM-2I5FF 8.1
GTEX-X4XX-0011-R5A-SM-46MWN 7.4
GTEX-12WSH-0011-R5b-SM-5P9F3 6.8
GTEX-144GO-0011-R5a-SM-5PNUR 6.1
GTEX-ZVT3-0011-R5a-SM-51MSI 6.1
GTEX-13112-0011-R5b-SM-5DUV8 6.0
GTEX-13PLJ-0011-R5a-SM-5O9BG 6.0
GTEX-13OVJ-0011-R5a-SM-5P9H7 5.5
GTEX-13SLW-0011-R5b-SM-5SI6Z 5.4
GTEX-144GL-0011-R5b-SM-5PNUJ 5.4
GTEX-NPJ7-0011-R5a-SM-33HBK 5.1
GTEX-X261-0011-R5A-SM-3NMB4 4.7
GTEX-139TS-0011-R5b-SM-5J2MZ 4.3
GTEX-S7PM-0011-R5A-SM-3NM8G 4.2
GTEX-12WSA-0011-R5b-SM-5GU5I 3.8
GTEX-13CF2-0011-R5a-SM-5LZWS 3.7
GTEX-1477Z-0011-R5b-SM-5PNUO 3.7
GTEX-1445S-0011-R5a-SM-5PNUS 3.4
GTEX-13FHP-0011-R5b-SM-5LZY2 2.9
GTEX-13NZA-0011-R5b-SM-5KM4K 2.9
GTEX-145MG-0011-R5b-SM-5S2VU 1.8
GTEX-11UD1-0011-R5b-SM-5P9FP 1.4
GTEX-139T8-0011-R5b-SM-5J1MO 1.4
Show all

CAUDATE - FANTOM5 CAGE

Average Tags Per Million

434.8

FANTOM5 sample id

Sample description

Tags Per Million

Caudate nucleus
Tags Per Million: 434.8
FF:10164-103B2 76 years, female 582.2
FF:10379-105H1 89 years, female 287.3

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