We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
CALB1
  • premium

    TISSUE

  • premium

    CELL

  • CANCER

TISSUE ATLAS PRIMARY DATA KIDNEY

GENE/PROTEIN

Antibody validation


Dictionary

Kidney

Tissue proteome

Kidney

KIDNEY - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:337.3TPM
GTEx:66.0RPKM
FANTOM5:278.5Tags Per Million

KIDNEY - Annotated protein expression

Annotated protein
expression

Cells in glomeruli:Not detected
Cells in tubules:High
 

Antibody staining

Antibody HPA023099

 

Antibody HPA056734

 

Antibody CAB002138

 

Cells in glomeruli

Not detected   Not detected   Not detected  

Cells in tubules

Medium   Medium   Medium  
     
     
     

KIDNEY - HPA RNA-seq

Average TPM

337.3

overview Female, age 58
Sample 1
TPM: 388.8
Cell types%
Cells in tubules: 60
Cells in glomeruli: 20
Fibroblasts: 5
Other cell types: 15
overview Female, age 67
Sample 2
TPM: 247.2
Cell types%
Cells in tubules: 70
Cells in glomeruli: 15
Fibroblasts: 10
Other cell types: 5
overview Female, age 55
Sample 3
TPM: 236.1
Cell types%
Cells in tubules: 80
Cells in glomeruli: 10
Fibroblasts: 5
Other cell types: 5
overview Male, age 46
Sample 4
TPM: 325.5
Cell types%
Cells in tubules: 60
Cells in glomeruli: 25
Fibroblasts: 5
Other cell types: 10
overview Female, age 57
Sample 5
TPM: 339.7
Cell types%
Cells in tubules: 60
Cells in glomeruli: 10
Fibroblasts: 10
Other cell types: 20
overview Male, age 78
Sample 6
TPM: 453.0
Cell types%
Cells in tubules: 65
Cells in glomeruli: 10
Fibroblasts: 5
Other cell types: 20
overview Male, age 73
Sample 7
TPM: 259.3
Cell types%
Cells in tubules: 60
Cells in glomeruli: 10
Fibroblasts: 10
Other cell types: 20
overview Female, age 59
Sample 8
TPM: 349.2
Cell types%
Cells in tubules: 65
Cells in glomeruli: 10
Fibroblasts: 10
Other cell types: 15
overview Female, age 48
Sample 9
TPM: 436.8
Cell types%
Cells in tubules: 60
Cells in glomeruli: 5
Fibroblasts: 10
Other cell types: 25

KIDNEY - GTEx RNA-seq

Average RPKM

66.0

GTEx sample id

RPKM

10.239.4118.00.7261.2020406080100120140160180200220240260
 
10.239.4118.00.7261.2020406080100120140160180200220240260

Kidney - Cortex

Kidney - Cortex
RPKM: 66.0
Samples: 32

Max RPKM: 261.2
Min RPKM: 0.7
Std RPKM: 67.8
Median RPKM: 39.4
GTEX-13OW6-1826-SM-5N9F9 261.2
GTEX-11OF3-1326-SM-5N9FJ 180.9
GTEX-N7MS-1626-SM-3LK5F 166.3
GTEX-12WSG-0826-SM-5EQ5A 163.0
GTEX-11GS4-2326-SM-5A5KS 161.6
GTEX-13RTJ-2226-SM-5S2Q1 141.1
GTEX-QLQW-1626-SM-4R1K1 132.0
GTEX-ZYFD-1526-SM-5NQ7T 131.6
GTEX-ZYFG-1626-SM-5GZYY 113.4
GTEX-Y5V6-2026-SM-5IFHO 103.3
GTEX-13NYB-1726-SM-5N9G2 92.1
GTEX-P4QS-1126-SM-3NMD5 70.6
GTEX-ZC5H-1726-SM-5HL7X 58.4
GTEX-XPVG-0526-SM-4B65N 45.6
GTEX-T5JC-1526-SM-4DM68 43.4
GTEX-1399S-0526-SM-5IJG8 40.2
GTEX-ZVZP-0926-SM-5GIDB 38.6
GTEX-147F4-2626-SM-5Q5CS 38.4
GTEX-1497J-0826-SM-5NQAJ 24.2
GTEX-145MN-0326-SM-5QGQI 20.9
GTEX-UPIC-1126-SM-4IHLO 20.2
GTEX-13OVL-1826-SM-5KLZR 13.1
GTEX-QDVN-1626-SM-48TZC 11.4
GTEX-13O1R-2526-SM-5N9FW 11.3
GTEX-ZYT6-2226-SM-5GIC9 6.9
GTEX-NPJ8-2226-SM-3TW8D 6.9
GTEX-13OVI-1126-SM-5KLZF 6.7
GTEX-ZLFU-0926-SM-5P9F8 5.1
GTEX-12696-0926-SM-5FQTV 1.8
GTEX-RN64-1626-SM-48FD7 1.5
GTEX-13112-2126-SM-5GCO4 0.9
GTEX-11TTK-1926-SM-5PNW8 0.7
Show all

KIDNEY - FANTOM5 CAGE

Average Tags Per Million

278.5

FANTOM5 sample id

Sample description

Tags Per Million

Kidney
Tags Per Million: 278.5
FF:10017-101C8 60,62,63 years, female 278.5

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.