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SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:64.4TPM
GTEx:20.8RPKM
FANTOM5:21.8Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Chondrocytes:Not detected
Fibroblasts:Not detected
Peripheral nerve:Not available
 

Antibody staining

Antibody HPA003412

  

Antibody CAB009335

  

Adipocytes

 Not detected   Not detected  

Chondrocytes

 Not detected  

Fibroblasts

 Not detected   Not detected  

Peripheral nerve

 Low  
   
   
   

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Medium
Fibroblasts:Not detected
Peripheral nerve:Low
 

Antibody staining

Antibody HPA003412

  

Antibody CAB009335

  

Adipocytes

 Medium   Low  

Fibroblasts

 Not detected   Low  

Peripheral nerve

 Low   Low  
   
   
   

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

64.4
N/A Female, age 80
Sample 1
TPM: 12.5
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45
Sample 2
TPM: 43.4
N/A Female, age 57
Sample 3
TPM: 36.0
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74
Sample 4
TPM: 80.5
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59
Sample 5
TPM: 149.5
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

20.8

GTEx sample id

RPKM
 

Adipose - Subcutaneous
Adipose - Subcutaneous
RPKM: 12.2
Samples: 350

Max RPKM: 62.5
Min RPKM: 0.9
Std RPKM: 8.2
Median RPKM: 10.3
GTEX-147GR-0426-SM-5S2OL 62.5
GTEX-11UD2-0126-SM-5EQL2 48.8
GTEX-131XF-2226-SM-5EQKG 39.4
GTEX-ZE9C-2826-SM-5S2MO 35.4
GTEX-REY6-0326-SM-2TF5A 35.1
GTEX-TML8-2026-SM-32QOP 33.8
GTEX-12WSD-0226-SM-59HKO 33.5
GTEX-12WSM-0226-SM-5LZV6 32.5
Show all
 

Adipose - Visceral (Omentum)
Adipose - Visceral (Omentum)
RPKM: 34.1
Samples: 227

Max RPKM: 200.3
Min RPKM: 2
Std RPKM: 26.5
Median RPKM: 27.9
GTEX-ZYW4-2226-SM-5GZYG 200.3
GTEX-13X6H-1726-SM-5Q5EH 182.3
GTEX-13O3P-0926-SM-5IFFI 135.5
GTEX-ZZPU-0326-SM-5N9BJ 129.7
GTEX-13X6I-1526-SM-5SIAC 129.1
GTEX-Y9LG-1226-SM-4VBQA 101.0
GTEX-13OVL-0826-SM-5L3GV 88.3
GTEX-WK11-2426-SM-3NMAA 86.2
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

21.8

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 21.8
FF:10010-101C1 65,65,76 years, mixed 21.8

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.