We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
PPP2CB
  • TISSUE

  • premium

    CELL

  • CANCER

TISSUE ATLAS PRIMARY DATA CAUDATE

GENE/PROTEIN

Antibody validation


Dictionary

Caudate

CAUDATE - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:56.6RPKM
FANTOM5:65.4Tags Per Million

CAUDATE - Annotated protein expression

Annotated protein
expression

Glial cells:Medium
Neuronal cells:High
 

Antibody staining

Antibody HPA043236

 

Antibody CAB018600

 

Glial cells

Low   Medium  

Neuronal cells

High   High  
   
   
   

CAUDATE - HPA RNA-seq

Pending HPA RNA-seq analysis


CAUDATE - GTEx RNA-seq

Average RPKM

56.6

GTEx sample id

RPKM

49.154.961.033.977.90102030405060708090
 
49.154.961.033.977.90102030405060708090

Brain - Caudate (basal ganglia)

Brain - Caudate (basal ganglia)
RPKM: 56.6
Samples: 117

Max RPKM: 99.2
Min RPKM: 23.6
Std RPKM: 12.1
Median RPKM: 54.9
GTEX-139TT-0011-R5b-SM-5K7W8 99.2
GTEX-12WSA-0011-R5b-SM-5GU5I 96.6
GTEX-T2IS-0011-R5A-SM-32QP4 92.2
GTEX-QMR6-0011-R5A-SM-32PKT 82.3
GTEX-13OVJ-0011-R5a-SM-5P9H7 81.0
GTEX-X4XX-0011-R5A-SM-46MWN 79.9
GTEX-PVOW-0011-R5A-SM-32PL7 77.9
GTEX-WWYW-0011-R5A-SM-3NB3E 77.0
GTEX-WHSE-0011-R5A-SM-3P5ZO 76.4
GTEX-P44H-0011-R5A-SM-2XCEX 76.2
GTEX-13NYS-0011-R5a-SM-5MR4D 76.0
GTEX-12WSB-0011-R5b-SM-5GU67 75.1
GTEX-XMD1-0011-R5A-SM-4AT47 74.6
GTEX-12WSM-0011-R5a-SM-5EQ4Y 71.4
GTEX-X261-0011-R5A-SM-3NMB4 71.2
GTEX-132Q8-0011-R5a-SM-5IJDM 66.5
GTEX-13SLW-0011-R5b-SM-5SI6Z 66.5
GTEX-PWO3-0011-R5A-SM-2I5EZ 66.3
GTEX-UTHO-0011-R5A-SM-3GIJD 66.0
GTEX-NPJ8-0011-R5a-SM-2HMJY 64.2
GTEX-144GO-0011-R5a-SM-5PNUR 64.1
GTEX-11H98-0011-R5b-SM-57WCF 63.9
GTEX-131YS-0011-R5b-SM-5K7YB 63.5
GTEX-WVLH-0011-R5A-SM-3MJFW 63.3
GTEX-13JUV-0011-R5a-SM-5LZY5 63.0
GTEX-13OW6-0011-R5a-SM-5O9BK 62.8
GTEX-T6MN-0011-R5A-SM-32QPD 62.8
GTEX-NL3H-0011-R5a-SM-2I3GB 62.4
GTEX-QVJO-0011-R5A-SM-2S1QM 62.1
GTEX-Y8DK-0011-R5B-SM-4RTW6 61.0
GTEX-13JVG-0011-R5a-SM-5MR4O 60.9
GTEX-12WSC-0011-R5b-SM-5CVNS 60.5
GTEX-11WQC-0011-R5a-SM-5BC74 60.4
GTEX-WL46-0011-R5A-SM-3LK6V 60.3
GTEX-13NYB-0011-R5a-SM-5MR45 60.1
GTEX-13FHO-0011-R5b-SM-5LZZ3 59.8
GTEX-13FLV-0011-R5a-SM-5LZWT 59.8
GTEX-N7MS-0011-R5a-SM-2HMK8 59.6
GTEX-1399T-0011-R5b-SM-5IJDK 59.3
GTEX-X585-0011-R5A-SM-46MVI 59.2
GTEX-11OF3-0011-R5a-SM-57WB4 59.1
GTEX-R55E-0011-R5A-SM-2TC5N 58.7
GTEX-ZUA1-0011-R5b-SM-51MTG 58.5
GTEX-S7SE-0011-R5A-SM-2XCDA 58.3
GTEX-13OW5-0011-R5b-SM-5L3FR 58.2
GTEX-13N1W-0011-R5b-SM-5MR5Q 58.0
GTEX-WZTO-0011-R5B-SM-3NMC5 58.0
GTEX-YFC4-0011-R5a-SM-4RGLR 57.9
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 57.5
GTEX-13X6I-0011-R5a-SM-5PNWW 57.3
GTEX-13CIG-0011-R5b-SM-5L3F2 57.1
GTEX-N7MT-0011-R5a-SM-2I3G6 57.1
GTEX-12ZZY-0011-R5a-SM-5EGL9 56.7
GTEX-13G51-0011-R5a-SM-5L3EB 56.5
GTEX-1445S-0011-R5a-SM-5PNUS 56.5
GTEX-11NV4-0011-R5a-SM-5NQ88 56.4
GTEX-1313W-0011-R5b-SM-5L3EP 56.0
GTEX-139TS-0011-R5b-SM-5J2MZ 55.3
GTEX-Q2AG-0011-R5A-SM-2HMJH 54.9
GTEX-13FLW-0011-R5a-SM-5LZX6 54.7
GTEX-T5JC-0011-R5A-SM-32PLK 54.4
GTEX-13CZV-0011-R5a-SM-5K7XA 54.2
GTEX-ZE9C-0011-R5a-SM-5EGLO 54.0
GTEX-12WSD-0011-R5b-SM-5CVNG 53.8
GTEX-RU72-0011-R5A-SM-2TF6U 53.7
GTEX-13O3Q-0011-R5b-SM-5P9H4 53.6
GTEX-Z93S-0011-R5b-SM-4RGNI 53.3
GTEX-13X6J-0011-R5b-SM-5PNWT 53.2
GTEX-ZF28-0011-R5a-SM-4WWCZ 53.2
GTEX-145LS-0011-R5a-SM-5SI65 53.1
GTEX-ZAB4-0011-R5a-SM-4SOKC 52.9
GTEX-11GSP-0011-R5a-SM-57WBE 52.8
GTEX-13O3O-0011-R5b-SM-5KM44 52.8
GTEX-145MH-0011-R5a-SM-5P9JT 52.8
GTEX-12WSH-0011-R5b-SM-5P9F3 52.4
GTEX-ZE7O-0011-R5a-SM-57WBO 51.2
GTEX-14BIM-0011-R5b-SM-5S2RM 51.1
GTEX-13OW7-0011-R5b-SM-5O9DM 51.0
GTEX-13SLX-0011-R5a-SM-5O9BV 50.9
GTEX-12ZZX-0011-R5a-SM-5HL89 50.7
GTEX-RVPU-0011-R5A-SM-2XCAD 50.7
GTEX-14ABY-0011-R5b-SM-5SI7B 50.6
GTEX-13OW8-0011-R5b-SM-5L3FQ 50.4
GTEX-NPJ7-0011-R5a-SM-33HBK 50.1
GTEX-11UD1-0011-R5b-SM-5P9FP 49.8
GTEX-13RTJ-0011-R5a-SM-5P9HR 49.3
GTEX-13VXU-0011-R5a-SM-5O9D7 49.2
GTEX-13S7M-0011-R5b-SM-5P9HS 49.1
GTEX-13FXS-0011-R5b-SM-5LZYE 48.9
GTEX-13X6K-0011-R5b-SM-5PNUE 48.8
GTEX-13OVL-0011-R5b-SM-5L3FU 48.7
GTEX-13PVQ-0011-R5b-SM-5O9DI 48.6
GTEX-TSE9-0011-R5A-SM-3DB7J 47.8
GTEX-ZVZQ-0011-R5b-SM-57WDC 47.6
GTEX-ZV68-0011-R5a-SM-4YCDW 47.2
GTEX-XOTO-0011-R5A-SM-4B657 47.1
GTEX-13OVH-0011-R5b-SM-5KM4L 46.9
GTEX-12WSF-0011-R5a-SM-5HL8K 46.8
GTEX-139T8-0011-R5b-SM-5J1MO 46.3
GTEX-13PLJ-0011-R5a-SM-5O9BG 46.3
GTEX-NL4W-0011-R5a-SM-2I3GD 46.3
GTEX-12ZZW-0011-R5a-SM-5DUVN 46.2
GTEX-ZXG5-0011-R5b-SM-57WBN 45.9
GTEX-OXRN-0011-R5A-SM-2I5EF 45.8
GTEX-ZVT3-0011-R5a-SM-51MSI 45.3
GTEX-S7PM-0011-R5A-SM-3NM8G 44.3
GTEX-YJ89-0011-R5a-SM-4V6GM 44.2
GTEX-144GL-0011-R5b-SM-5PNUJ 43.0
GTEX-14BIN-0011-R5b-SM-5SI78 42.8
GTEX-RVPV-0011-R5A-SM-2TF69 40.2
GTEX-OHPN-0011-R5A-SM-2I5FF 40.0
GTEX-13112-0011-R5b-SM-5DUV8 39.4
GTEX-13FHP-0011-R5b-SM-5LZY2 37.7
GTEX-13CF2-0011-R5a-SM-5LZWS 36.9
GTEX-145MG-0011-R5b-SM-5S2VU 35.3
GTEX-1477Z-0011-R5b-SM-5PNUO 33.9
GTEX-13NZA-0011-R5b-SM-5KM4K 23.6
Show all

CAUDATE - FANTOM5 CAGE

Average Tags Per Million

65.4

FANTOM5 sample id

Sample description

Tags Per Million

Caudate nucleus
Tags Per Million: 65.4
FF:10164-103B2 76 years, female 98.8
FF:10379-105H1 89 years, female 32.0

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.