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TISSUE ATLAS PRIMARY DATA CEREBRAL CORTEX

GENE/PROTEIN

Antibody validation


Dictionary

Cerebral cortex

Tissue proteome

Brain
Extended brain samples

CEREBRAL CORTEX - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:208.0TPM
GTEx:61.5RPKM

CEREBRAL CORTEX - Annotated protein expression

Annotated protein
expression

Endothelial cells:Low
Glial cells:Medium
Neuronal cells:High
Neuropil:High
 

Antibody staining

Antibody HPA043236

 

Antibody CAB018600

 

Endothelial cells

Medium   Low  

Glial cells

Medium   Medium  

Neuronal cells

High   High  

Neuropil

Medium   High  
   
   
   

CEREBRAL CORTEX - HPA RNA-seq

Average TPM

208.0

N/A Male, age 5
Sample 1
TPM: 224.1
overview Female, age 40
Sample 2
TPM: 198.0
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65
overview Male, age 70
Sample 3
TPM: 202.1
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM

61.5

GTEx sample id

RPKM

48.254.559.640.571.8010203040506070
 
48.254.559.640.571.8010203040506070

Brain - Cortex

Brain - Cortex
RPKM: 54.4
Samples: 114

Max RPKM: 78
Min RPKM: 27.5
Std RPKM: 7.9
Median RPKM: 54.5
GTEX-13IVO-2926-SM-5L3CZ 78.0
GTEX-11OC5-0726-SM-5P9JK 71.8
GTEX-QMR6-1426-SM-32PLA 71.1
GTEX-11TTK-2926-SM-5PNYP 68.5
GTEX-139T8-1026-SM-5J2MC 68.3
GTEX-PWO3-0926-SM-2I5EY 68.1
GTEX-PVOW-2526-SM-2XCF7 67.4
GTEX-ZE7O-3126-SM-5HL5X 66.9
GTEX-13OVJ-2826-SM-5L3GW 66.2
GTEX-13FHO-3026-SM-5J1O9 65.4
GTEX-Y8DK-0826-SM-4TT3T 64.0
GTEX-UTHO-3026-SM-3GAFB 63.9
GTEX-13X6K-2926-SM-5Q5D5 63.5
GTEX-11WQK-3026-SM-5EQL6 62.9
GTEX-1192X-3126-SM-5N9BY 62.7
GTEX-13X6J-3026-SM-5Q5CU 62.7
GTEX-X585-3026-SM-46MWF 62.4
GTEX-1445S-3026-SM-5O9BR 62.3
GTEX-T2IS-3026-SM-32QPM 61.8
GTEX-11NV4-2126-SM-5N9DS 61.2
GTEX-WWYW-3126-SM-3NB39 61.0
GTEX-13JUV-2926-SM-5LZX7 60.5
GTEX-X4XX-3026-SM-3NMB2 60.4
GTEX-12ZZZ-3026-SM-5BC67 60.2
GTEX-RU72-3026-SM-5SI7Y 60.2
GTEX-QVUS-2826-SM-3GADB 60.0
GTEX-TSE9-3026-SM-3DB76 60.0
GTEX-13G51-3026-SM-5IJB8 59.9
GTEX-13NYB-3026-SM-5IJD7 59.6
GTEX-1128S-2726-SM-5H12C 59.5
GTEX-13OW6-3026-SM-5J2MI 59.5
GTEX-13OW7-3026-SM-5L3GY 59.0
GTEX-WZTO-2926-SM-3NM9I 58.8
GTEX-145MG-3026-SM-5RQJA 58.6
GTEX-ZAK1-3026-SM-5S2MJ 58.6
GTEX-11NUK-2926-SM-5A5MD 58.3
GTEX-11GSP-3226-SM-5986O 58.2
GTEX-XLM4-3026-SM-4AT6L 57.9
GTEX-13JVG-3126-SM-5L3FH 57.8
GTEX-14BMV-3026-SM-5S2PQ 57.7
GTEX-11PRG-2926-SM-5987A 57.3
GTEX-144FL-3026-SM-5O99C 56.9
GTEX-13NYC-2826-SM-5K7WR 56.8
GTEX-147GR-3026-SM-5S2ML 56.7
GTEX-14ASI-3026-SM-5S2PN 56.7
GTEX-QDT8-2926-SM-32PKC 56.7
GTEX-11O72-2926-SM-5BC4V 56.5
GTEX-13OVH-3026-SM-5MR4N 56.2
GTEX-14A5I-2926-SM-5Q5CQ 56.0
GTEX-WHSE-3026-SM-3P5ZH 55.7
GTEX-13QIC-2926-SM-5J2NF 55.6
GTEX-13FLW-1426-SM-5K7YE 55.3
GTEX-11GSO-2926-SM-5HL73 55.0
GTEX-WVLH-3026-SM-3MJG9 55.0
GTEX-12WSD-3126-SM-5HL7P 54.9
GTEX-11EI6-3026-SM-5GZZO 54.8
GTEX-131XW-3126-SM-5LZUC 54.6
GTEX-YFC4-3126-SM-5PNV6 54.4
GTEX-111FC-3126-SM-5GZZ2 53.9
GTEX-11DXY-3226-SM-5GIDE 53.9
GTEX-11EMC-3226-SM-5EGKW 53.9
GTEX-131YS-3126-SM-5KLYT 53.9
GTEX-13PVQ-3026-SM-5SI93 53.9
GTEX-13O3Q-2926-SM-5KM45 53.8
GTEX-12ZZW-2926-SM-5LZUP 53.7
GTEX-12WSH-3026-SM-5CVNI 53.6
GTEX-ZVT3-3026-SM-5E43N 53.6
GTEX-OXRN-2426-SM-2I5EQ 53.3
GTEX-13PL6-3126-SM-5LUAR 53.0
GTEX-QVJO-1426-SM-2S1QY 52.9
GTEX-R55F-1326-SM-5S2V4 52.8
GTEX-13NYS-3126-SM-5KLYV 52.7
GTEX-RNOR-2326-SM-2TF4I 52.7
GTEX-132Q8-3026-SM-5PNVG 51.9
GTEX-1399T-3026-SM-5KLZC 51.9
GTEX-13S7M-3126-SM-5RQJQ 51.9
GTEX-N7MT-1126-SM-5SI7V 51.9
GTEX-13FXS-3126-SM-5J2NN 51.2
GTEX-ZYFD-3026-SM-5E44C 50.6
GTEX-144GL-3026-SM-5Q5CW 50.4
GTEX-ZUA1-3026-SM-59HJC 50.4
GTEX-12ZZX-2926-SM-5GCOQ 50.3
GTEX-T5JC-2426-SM-3NMDB 49.9
GTEX-13O3O-3126-SM-5KM3H 49.6
GTEX-WL46-2926-SM-3LK82 48.6
GTEX-13FHP-3026-SM-5IJBS 48.1
GTEX-11DXW-1126-SM-5H12Q 48.0
GTEX-145MH-3026-SM-5Q5DZ 47.4
GTEX-13OW8-2826-SM-5L3GC 46.8
GTEX-12WSA-2926-SM-5EQ4D 46.4
GTEX-11ONC-2926-SM-5P9JM 45.9
GTEX-13SLX-3126-SM-5S2Q5 45.9
GTEX-145LS-3126-SM-5Q5BY 45.5
GTEX-12126-1026-SM-5P9JJ 45.3
GTEX-1313W-3126-SM-5LZUI 45.2
GTEX-13VXU-2926-SM-5LU5C 45.2
GTEX-11ZUS-2926-SM-5FQSL 45.0
GTEX-12WSC-3026-SM-5GCNF 45.0
GTEX-Y111-2726-SM-4TT3N 44.9
GTEX-145MF-2726-SM-5O995 44.8
GTEX-NPJ8-1526-SM-2D7VU 44.8
GTEX-T6MN-2626-SM-32PMQ 44.8
GTEX-1117F-3226-SM-5N9CT 44.6
GTEX-XOTO-3026-SM-4B65M 44.5
GTEX-12ZZY-3026-SM-5GCOU 44.3
GTEX-Z93S-2926-SM-57WB9 43.9
GTEX-ZZPT-3026-SM-5GZXH 43.8
GTEX-ZAJG-3126-SM-5HL9J 43.7
GTEX-Q2AG-2926-SM-2HMJ3 42.1
GTEX-YJ89-3026-SM-5IFJI 41.8
GTEX-NPJ7-2726-SM-2I3FT 41.1
GTEX-117XS-3026-SM-5N9CA 40.8
GTEX-11GS4-3126-SM-5A5LH 40.5
GTEX-11OF3-2926-SM-5HL78 27.5
Show all
63.166.272.149.685.50102030405060708090100110120
 
63.166.272.149.685.50102030405060708090100110120

Brain - Frontal Cortex (BA9)

Brain - Frontal Cortex (BA9)
RPKM: 69.1
Samples: 108

Max RPKM: 122.1
Min RPKM: 45.6
Std RPKM: 11.7
Median RPKM: 66.2
GTEX-12WSD-0011-R10b-SM-5GU79 122.1
GTEX-P44H-0011-R10A-SM-2XCEK 102.1
GTEX-QVUS-0011-R10A-SM-3GIK3 100.4
GTEX-QMR6-0011-R10A-SM-32PKO 93.5
GTEX-13QJC-0011-R10a-SM-5SI63 93.1
GTEX-139TS-0011-R10a-SM-5K7TU 91.1
GTEX-13N2G-0011-R10a-SM-5MR34 90.4
GTEX-ZE7O-0011-R10a-SM-57WAZ 90.0
GTEX-QDT8-0011-R10A-SM-32PKG 89.9
GTEX-11WQK-0011-R10a-SM-5BC6R 87.4
GTEX-12ZZY-0011-R10b-SM-5HL7W 85.8
GTEX-13JVG-0011-R10b-SM-5KM2P 85.5
GTEX-13OVJ-0011-R10b-SM-5L3HT 85.4
GTEX-12ZZW-0011-R10b-SM-5HL9X 81.2
GTEX-ZDXO-0011-R10a-SM-4WWD8 81.0
GTEX-13SLW-0011-R10a-SM-5S2UI 80.0
GTEX-TSE9-0011-R10A-SM-3DB7O 79.8
GTEX-11H98-0011-R10b-SM-5NQ98 78.8
GTEX-13JUV-0011-R10b-SM-5LZXR 78.8
GTEX-WWYW-0011-R10A-SM-3NB35 78.0
GTEX-X261-0011-R10B-SM-4E3JT 77.7
GTEX-1445S-0011-R10a-SM-5PNWB 76.6
GTEX-YFC4-0011-R10a-SM-4SOK5 75.7
GTEX-ZUA1-0011-R10a-SM-51MT6 74.6
GTEX-WVLH-0011-R10A-SM-3MJFM 74.0
GTEX-13FHO-0011-R10b-SM-5J2MM 73.0
GTEX-13NYB-0011-R10a-SM-5KM43 72.9
GTEX-13FLV-0011-R10b-SM-5LZZ2 71.8
GTEX-S7SE-0011-R10A-SM-2XCDF 71.8
GTEX-XMD1-0011-R10A-SM-4AT4A 71.8
GTEX-T6MN-0011-R10A-SM-32QP7 71.7
GTEX-ZVT3-0011-R10b-SM-57WB6 71.4
GTEX-WL46-0011-R10A-SM-3MJFQ 70.8
GTEX-145LU-0011-R10a-SM-5PNWJ 70.0
GTEX-11GSP-0011-R10a-SM-5NQ7J 69.8
GTEX-132Q8-0011-R10b-SM-5DUWZ 69.8
GTEX-12126-0011-R10b-SM-5BC6T 69.7
GTEX-13FLW-0011-R10b-SM-5LZZF 69.6
GTEX-13FXS-0011-R10a-SM-5J2MA 69.5
GTEX-12WSH-0011-R10a-SM-5LZUS 69.4
GTEX-13OW6-0011-R10a-SM-5L3HE 68.5
GTEX-145MG-0011-R10a-SM-5PNWG 68.4
GTEX-13X6K-0011-R10a-SM-5P9JR 67.8
GTEX-1477Z-0011-R10b-SM-5S2RF 67.8
GTEX-XLM4-0011-R10A-SM-4AT5P 67.7
GTEX-12WSC-0011-R10a-SM-5GU57 67.6
GTEX-T5JC-0011-R10A-SM-32PM2 67.6
GTEX-13S7M-0011-R10b-SM-5PNZB 67.3
GTEX-OXRN-0011-R10A-SM-2I5GC 67.3
GTEX-131XH-0011-R10a-SM-5EGLJ 66.8
GTEX-ZAB4-0011-R10a-SM-4SOKH 66.8
GTEX-14BIN-0011-R10a-SM-5S2UA 66.7
GTEX-13OW8-0011-R10a-SM-5L3H6 66.6
GTEX-12ZZZ-0011-R10a-SM-5P9HC 66.3
GTEX-12WSM-0011-R10a-SM-5DUWV 66.1
GTEX-13QIC-0011-R10a-SM-5O9C7 66.1
GTEX-13X6I-0011-R10a-SM-5PNWI 65.8
GTEX-Z93S-0011-R10a-SM-4RGNM 65.7
GTEX-ZV68-0011-R10a-SM-51MT7 65.7
GTEX-13X6J-0011-R10b-SM-5PNWA 65.5
GTEX-147GR-0011-R10b-SM-5S2UM 65.5
GTEX-11WQC-0011-R10a-SM-57WCT 65.4
GTEX-Y8DK-0011-R10A-SM-4SOK1 65.4
GTEX-11ZUS-0011-R10b-SM-5BC79 65.3
GTEX-131YS-0011-R10b-SM-5EQ5N 65.1
GTEX-13G51-0011-R10b-SM-5LZYF 64.9
GTEX-N7MS-0011-R10A-SM-2HMJK 64.8
GTEX-YJ89-0011-R10a-SM-4SOK9 64.8
GTEX-13OVL-0011-R10a-SM-5L3GS 64.6
GTEX-X4EP-0011-R10B-SM-4QASJ 64.6
GTEX-13O3Q-0011-R10b-SM-5KM39 64.4
GTEX-145MH-0011-R10b-SM-5PNUK 64.4
GTEX-X4XX-0011-R10B-SM-46MWO 64.2
GTEX-OXRO-0011-R10A-SM-2I5EH 64.1
GTEX-ZXG5-0011-R10a-SM-57WDD 64.1
GTEX-12ZZX-0011-R10b-SM-5DUWK 63.9
GTEX-13RTJ-0011-R10b-SM-5O9CW 63.9
GTEX-ZVZQ-0011-R10b-SM-51MRT 63.8
GTEX-14ASI-0011-R10b-SM-5S2VZ 63.4
GTEX-14753-0011-R10b-SM-5S2WE 63.1
GTEX-QVJO-0011-R10A-SM-2S1QJ 63.1
GTEX-12WSF-0011-R10a-SM-5LZVH 63.0
GTEX-12WSE-0011-R10b-SM-5P9JV 62.7
GTEX-14BIL-0011-R10a-SM-5SI75 62.7
GTEX-Q2AG-0011-R10A-SM-2HMLA 62.3
GTEX-13CZV-0011-R10b-SM-5LZYD 62.1
GTEX-1313W-0011-R10b-SM-5DUXA 61.3
GTEX-13IVO-0011-R10a-SM-5LZY3 60.6
GTEX-WZTO-0011-R10B-SM-4E3KB 60.2
GTEX-13O3O-0011-R10a-SM-5LUA9 60.1
GTEX-13FTZ-0011-R10b-SM-5KLZS 59.8
GTEX-13N1W-0011-R10b-SM-5MR4H 59.8
GTEX-NPJ7-0011-R10A-SM-2I3E5 59.8
GTEX-147F4-0011-R10b-SM-5S2WC 59.7
GTEX-ZF28-0011-R10a-SM-4WWEH 59.1
GTEX-X585-0011-R10A-SM-46MUY 58.7
GTEX-12WSA-0011-R10b-SM-5P9ET 57.6
GTEX-NL4W-0011-R10A-SM-2I3DY 57.5
GTEX-N7MT-0011-R10A-SM-2I3E1 57.3
GTEX-13NYS-0011-R10a-SM-5MR4S 56.9
GTEX-145LS-0011-R10a-SM-5PNUQ 54.0
GTEX-RVPU-0011-R10A-SM-2XCAH 53.5
GTEX-NPJ8-0011-R10A-SM-2YUMO 53.0
GTEX-NL3H-0011-R10A-SM-2I3E9 52.9
GTEX-13OW7-0011-R10a-SM-5L3H3 52.6
GTEX-131XW-0011-R10a-SM-5DUVA 49.6
GTEX-13SLX-0011-R10a-SM-5P9HV 49.5
GTEX-13NZA-0011-R10b-SM-5KM54 45.6
Show all

CEREBRAL CORTEX - FANTOM5 CAGE

No Fantom CAGE analysis found for this gene / tissue

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