We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
PPP2CB
  • TISSUE

  • premium

    CELL

  • CANCER

TISSUE ATLAS PRIMARY DATA KIDNEY

GENE/PROTEIN

Antibody validation


Dictionary

Kidney

Tissue proteome

Kidney

KIDNEY - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:135.3TPM
GTEx:39.2RPKM
FANTOM5:70.6Tags Per Million

KIDNEY - Annotated protein expression

Annotated protein
expression

Cells in glomeruli:High
Cells in tubules:Medium
 

Antibody staining

Antibody HPA043236

 

Antibody CAB018600

 

Cells in glomeruli

Low   High  

Cells in tubules

High   Medium  
   
   
   

KIDNEY - HPA RNA-seq

Average TPM

135.3

overview Female, age 58
Sample 1
TPM: 126.8
Cell types%
Cells in tubules: 60
Cells in glomeruli: 20
Fibroblasts: 5
Other cell types: 15
overview Female, age 67
Sample 2
TPM: 95.2
Cell types%
Cells in tubules: 70
Cells in glomeruli: 15
Fibroblasts: 10
Other cell types: 5
overview Female, age 55
Sample 3
TPM: 105.3
Cell types%
Cells in tubules: 80
Cells in glomeruli: 10
Fibroblasts: 5
Other cell types: 5
overview Male, age 46
Sample 4
TPM: 87.4
Cell types%
Cells in tubules: 60
Cells in glomeruli: 25
Fibroblasts: 5
Other cell types: 10
overview Female, age 57
Sample 5
TPM: 110.3
Cell types%
Cells in tubules: 60
Cells in glomeruli: 10
Fibroblasts: 10
Other cell types: 20
overview Male, age 78
Sample 6
TPM: 192.5
Cell types%
Cells in tubules: 65
Cells in glomeruli: 10
Fibroblasts: 5
Other cell types: 20
overview Male, age 73
Sample 7
TPM: 149.8
Cell types%
Cells in tubules: 60
Cells in glomeruli: 10
Fibroblasts: 10
Other cell types: 20
overview Female, age 59
Sample 8
TPM: 172.6
Cell types%
Cells in tubules: 65
Cells in glomeruli: 10
Fibroblasts: 10
Other cell types: 15
overview Female, age 48
Sample 9
TPM: 177.9
Cell types%
Cells in tubules: 60
Cells in glomeruli: 5
Fibroblasts: 10
Other cell types: 25

KIDNEY - GTEx RNA-seq

Average RPKM

39.2

GTEx sample id

RPKM

33.637.743.724.057.60510152025303540455055
 
33.637.743.724.057.60510152025303540455055

Kidney - Cortex

Kidney - Cortex
RPKM: 39.2
Samples: 32

Max RPKM: 57.6
Min RPKM: 24
Std RPKM: 8.2
Median RPKM: 37.7
GTEX-QLQW-1626-SM-4R1K1 57.6
GTEX-145MN-0326-SM-5QGQI 53.3
GTEX-12696-0926-SM-5FQTV 53.0
GTEX-13NYB-1726-SM-5N9G2 51.5
GTEX-1497J-0826-SM-5NQAJ 49.3
GTEX-11TTK-1926-SM-5PNW8 48.0
GTEX-ZYT6-2226-SM-5GIC9 46.6
GTEX-N7MS-1626-SM-3LK5F 43.8
GTEX-RN64-1626-SM-48FD7 43.7
GTEX-ZYFG-1626-SM-5GZYY 43.4
GTEX-147F4-2626-SM-5Q5CS 43.4
GTEX-13RTJ-2226-SM-5S2Q1 42.7
GTEX-13OVL-1826-SM-5KLZR 41.1
GTEX-P4QS-1126-SM-3NMD5 40.5
GTEX-XPVG-0526-SM-4B65N 40.4
GTEX-12WSG-0826-SM-5EQ5A 38.9
GTEX-1399S-0526-SM-5IJG8 36.5
GTEX-ZLFU-0926-SM-5P9F8 36.1
GTEX-13O1R-2526-SM-5N9FW 35.9
GTEX-11GS4-2326-SM-5A5KS 35.1
GTEX-13OVI-1126-SM-5KLZF 34.3
GTEX-13112-2126-SM-5GCO4 33.9
GTEX-ZVZP-0926-SM-5GIDB 33.7
GTEX-11OF3-1326-SM-5N9FJ 33.6
GTEX-Y5V6-2026-SM-5IFHO 33.5
GTEX-13OW6-1826-SM-5N9F9 33.0
GTEX-T5JC-1526-SM-4DM68 32.9
GTEX-QDVN-1626-SM-48TZC 32.2
GTEX-UPIC-1126-SM-4IHLO 30.4
GTEX-ZC5H-1726-SM-5HL7X 26.7
GTEX-NPJ8-2226-SM-3TW8D 26.0
GTEX-ZYFD-1526-SM-5NQ7T 24.0
Show all

KIDNEY - FANTOM5 CAGE

Average Tags Per Million

70.6

FANTOM5 sample id

Sample description

Tags Per Million

Kidney
Tags Per Million: 70.6
FF:10017-101C8 60,62,63 years, female 70.6

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.