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TISSUE ATLAS PRIMARY DATA SMALL INTESTINE

GENE/PROTEIN

Antibody validation


Dictionary

Small intestine

Tissue proteome

Small intestine

SMALL INTESTINE - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:96.0TPM
GTEx:29.1RPKM
FANTOM5:85.5Tags Per Million

SMALL INTESTINE - Annotated protein expression

Annotated protein
expression

Glandular cells:High
 

Antibody staining

Antibody HPA043236

 

Antibody CAB018600

 

Glandular cells

Medium   High  
   
   
   

SMALL INTESTINE - HPA RNA-seq

Average TPM

96.0

overview Male, age 65
Sample 1
TPM: 74.8
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 39
Sample 2
TPM: 99.5
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 68
Sample 3
TPM: 97.3
Cell types%
Glandular cells: 30
Smooth muscle cells: 15
Other cell types: 55
N/A Male, age 85
Sample 4
TPM: 112.3

SMALL INTESTINE - GTEx RNA-seq

Average RPKM

29.1

GTEx sample id

RPKM

25.227.933.615.743.6051015202530354045
 
25.227.933.615.743.6051015202530354045

Small Intestine - Terminal Ileum

Small Intestine - Terminal Ileum
RPKM: 29.1
Samples: 88

Max RPKM: 47.5
Min RPKM: 15.7
Std RPKM: 6.7
Median RPKM: 28
GTEX-WEY5-1526-SM-4LMJF 47.5
GTEX-117YX-0326-SM-5GICL 43.6
GTEX-YEC4-1726-SM-4W21E 42.2
GTEX-13FTW-2026-SM-5IJE2 41.8
GTEX-Y3IK-1726-SM-4YCCR 41.4
GTEX-12WSK-1526-SM-5CVNO 40.5
GTEX-ZF2S-1726-SM-57WFT 40.5
GTEX-ZTX8-0526-SM-59HLD 38.7
GTEX-1192X-2526-SM-59868 38.4
GTEX-ZQUD-0926-SM-57WE3 38.4
GTEX-XGQ4-1326-SM-4GIDU 37.2
GTEX-145LT-1026-SM-5LU9O 37.1
GTEX-ZTSS-0926-SM-59865 36.8
GTEX-13D11-0726-SM-5LZZB 36.5
GTEX-Y9LG-1626-SM-5IFHM 36.4
GTEX-1122O-1326-SM-5H11F 36.4
GTEX-ZVT2-2126-SM-5NQ93 35.9
GTEX-111YS-1426-SM-5GID8 34.5
GTEX-ZLV1-1126-SM-4WWBW 34.4
GTEX-111CU-1326-SM-5NQ8L 34.2
GTEX-ZPCL-1726-SM-57WEO 33.7
GTEX-ZZ64-0526-SM-5GZXM 33.7
GTEX-ZYFG-2026-SM-5E43Y 33.6
GTEX-13PL7-2626-SM-5IFH4 33.4
GTEX-XBED-1426-SM-4AT4G 32.7
GTEX-11EQ9-1326-SM-5985X 32.4
GTEX-ZYWO-1526-SM-5SIAL 32.1
GTEX-X5EB-1626-SM-4E3IV 32.0
GTEX-1399S-2026-SM-5KM4B 31.8
GTEX-ZVZP-1826-SM-5GZXB 31.6
GTEX-YB5E-1526-SM-5IFIE 31.5
GTEX-13OVI-1926-SM-5IJCG 31.5
GTEX-139YR-2226-SM-5IFFW 31.3
GTEX-XXEK-1026-SM-4BRUW 31.1
GTEX-13O21-1026-SM-5IJDU 30.8
GTEX-ZPIC-2326-SM-57WDW 30.8
GTEX-11DXX-1626-SM-5H11H 30.7
GTEX-133LE-1426-SM-5IFH1 30.5
GTEX-WFG7-1726-SM-4LVME 29.4
GTEX-14DAR-1426-SM-5RQIR 29.3
GTEX-ZA64-1226-SM-5HL7B 29.1
GTEX-Y114-1426-SM-4TT6W 28.5
GTEX-XAJ8-0526-SM-47JYK 28.1
GTEX-WFG8-1626-SM-4LVMB 28.0
GTEX-11I78-1126-SM-5A5K5 27.9
GTEX-145ME-0926-SM-5O9AR 27.8
GTEX-148VJ-2226-SM-5NQ9M 27.6
GTEX-13RTK-0826-SM-5Q5C6 27.4
GTEX-11DXZ-1326-SM-5H11X 27.3
GTEX-ZTPG-2626-SM-57WFX 27.2
GTEX-YF7O-1826-SM-5IFIU 26.8
GTEX-13111-1426-SM-5DUW3 26.8
GTEX-1399R-2026-SM-5K7WN 26.7
GTEX-ZVP2-1726-SM-5GU5P 26.5
GTEX-13QBU-1926-SM-5IJEW 26.5
GTEX-11P7K-1626-SM-5GU63 26.5
GTEX-Y5LM-1626-SM-4VDTB 26.4
GTEX-XUZC-1426-SM-4BRV3 26.0
GTEX-ZQG8-2526-SM-57WEQ 25.9
GTEX-1399U-2126-SM-5IFEZ 25.8
GTEX-131XF-1326-SM-5GCMQ 25.5
GTEX-139T6-1026-SM-5IJGC 25.5
GTEX-ZLFU-1526-SM-4WWBT 25.5
GTEX-WQUQ-2426-SM-4MVNW 25.4
GTEX-ZXES-1526-SM-5NQ95 25.4
GTEX-131XG-1726-SM-5LZUR 25.2
GTEX-11P82-0826-SM-5P9GU 25.1
GTEX-XMK1-1826-SM-4B66F 24.4
GTEX-13FH7-1226-SM-5IJFK 24.3
GTEX-13113-1226-SM-5EGHT 23.6
GTEX-WFJO-0926-SM-4LVM2 23.2
GTEX-13O61-1326-SM-5KM31 22.6
GTEX-14E6E-1626-SM-5RQI7 22.6
GTEX-12BJ1-1926-SM-5HL9Z 22.2
GTEX-ZEX8-1826-SM-57WBH 22.1
GTEX-13CF3-1226-SM-5LZXN 21.9
GTEX-ZP4G-1626-SM-57WGD 21.5
GTEX-VJYA-0926-SM-4KL1N 20.7
GTEX-ZC5H-2326-SM-4WAYT 20.7
GTEX-11NSD-1726-SM-5N9C3 20.4
GTEX-WH7G-1626-SM-4LVMY 20.4
GTEX-11XUK-1426-SM-5EQMG 18.9
GTEX-WRHK-1026-SM-4MVOD 18.5
GTEX-Z9EW-0926-SM-5CVMM 18.1
GTEX-11VI4-1626-SM-5EQKO 17.8
GTEX-UPK5-2026-SM-4JBIM 17.3
GTEX-X15G-1426-SM-4PQZK 16.2
GTEX-VUSG-1726-SM-4KKZL 15.7
Show all

SMALL INTESTINE - FANTOM5 CAGE

Average Tags Per Million

85.5

FANTOM5 sample id

Sample description

Tags Per Million

Small intestine
Tags Per Million: 85.5
FF:10024-101D6 15,40,85 years, mixed 85.5

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The Human Protein Atlas project is funded
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