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TISSUE ATLAS PRIMARY DATA CEREBRAL CORTEX

GENE/PROTEIN

Antibody validation


Dictionary

Cerebral cortex

Tissue proteome

Brain
Extended brain samples

CEREBRAL CORTEX - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:76.6TPM
GTEx:53.5RPKM

CEREBRAL CORTEX - Annotated protein expression

Annotated protein
expression

Endothelial cells:Medium
Glial cells:Low
Neuronal cells:Medium
Neuropil:Medium
 

Antibody staining

Antibody HPA018910

 

Antibody HPA018921

 

Antibody HPA018923

 

Endothelial cells

Medium   Not detected   Medium  

Glial cells

Low   Not detected   Medium  

Neuronal cells

Medium   Medium   Medium  

Neuropil

Medium   Medium   Low  
     
     
     

CEREBRAL CORTEX - HPA RNA-seq

Average TPM

76.6

N/A Male, age 5
Sample 1
TPM: 87.1
overview Female, age 40
Sample 2
TPM: 62.7
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65
overview Male, age 70
Sample 3
TPM: 80.1
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM

53.5

GTEx sample id

RPKM

 

Brain - Cortex

Brain - Cortex
RPKM: 51.3
Samples: 114

Max RPKM: 79.7
Min RPKM: 24.3
Std RPKM: 11
Median RPKM: 52.1
GTEX-ZE7O-3126-SM-5HL5X 79.7
GTEX-12ZZW-2926-SM-5LZUP 77.2
GTEX-13JVG-3126-SM-5L3FH 76.0
GTEX-13OVJ-2826-SM-5L3GW 72.5
GTEX-139T8-1026-SM-5J2MC 72.4
GTEX-145MG-3026-SM-5RQJA 69.4
GTEX-11NV4-2126-SM-5N9DS 67.2
GTEX-11EMC-3226-SM-5EGKW 67.1
GTEX-12ZZY-3026-SM-5GCOU 66.8
GTEX-1117F-3226-SM-5N9CT 65.9
GTEX-13NYB-3026-SM-5IJD7 65.9
GTEX-13O3O-3126-SM-5KM3H 65.8
GTEX-13OW8-2826-SM-5L3GC 65.2
GTEX-11OC5-0726-SM-5P9JK 64.3
GTEX-1192X-3126-SM-5N9BY 63.7
GTEX-13FHO-3026-SM-5J1O9 63.5
GTEX-Q2AG-2926-SM-2HMJ3 63.4
GTEX-131XW-3126-SM-5LZUC 62.5
GTEX-11ONC-2926-SM-5P9JM 61.2
GTEX-117XS-3026-SM-5N9CA 60.9
GTEX-13O3Q-2926-SM-5KM45 60.6
GTEX-12WSD-3126-SM-5HL7P 60.5
GTEX-13SLX-3126-SM-5S2Q5 59.8
GTEX-13JUV-2926-SM-5LZX7 59.6
GTEX-QVJO-1426-SM-2S1QY 59.3
GTEX-145LS-3126-SM-5Q5BY 59.0
GTEX-13FLW-1426-SM-5K7YE 58.7
GTEX-14BMV-3026-SM-5S2PQ 58.5
GTEX-11GSO-2926-SM-5HL73 58.4
GTEX-13X6K-2926-SM-5Q5D5 57.6
GTEX-11PRG-2926-SM-5987A 57.5
GTEX-11GSP-3226-SM-5986O 57.3
GTEX-12WSA-2926-SM-5EQ4D 57.3
GTEX-ZVT3-3026-SM-5E43N 57.3
GTEX-1399T-3026-SM-5KLZC 56.6
GTEX-11DXY-3226-SM-5GIDE 56.1
GTEX-1313W-3126-SM-5LZUI 56.1
GTEX-13OVH-3026-SM-5MR4N 55.8
GTEX-Y111-2726-SM-4TT3N 55.8
GTEX-YFC4-3126-SM-5PNV6 55.7
GTEX-13FHP-3026-SM-5IJBS 55.5
GTEX-12WSC-3026-SM-5GCNF 55.1
GTEX-13OW6-3026-SM-5J2MI 54.8
GTEX-13PVQ-3026-SM-5SI93 54.7
GTEX-11TTK-2926-SM-5PNYP 54.3
GTEX-11GS4-3126-SM-5A5LH 54.2
GTEX-11EI6-3026-SM-5GZZO 53.9
GTEX-1445S-3026-SM-5O9BR 53.9
GTEX-145MF-2726-SM-5O995 53.8
GTEX-YJ89-3026-SM-5IFJI 53.4
GTEX-RU72-3026-SM-5SI7Y 53.1
GTEX-QVUS-2826-SM-3GADB 52.9
GTEX-144FL-3026-SM-5O99C 52.8
GTEX-WVLH-3026-SM-3MJG9 52.7
GTEX-NPJ8-1526-SM-2D7VU 52.5
GTEX-ZAJG-3126-SM-5HL9J 52.4
GTEX-ZYFD-3026-SM-5E44C 52.3
GTEX-12126-1026-SM-5P9JJ 51.8
GTEX-13G51-3026-SM-5IJB8 51.5
GTEX-T5JC-2426-SM-3NMDB 51.0
GTEX-XLM4-3026-SM-4AT6L 50.8
GTEX-11DXW-1126-SM-5H12Q 50.5
GTEX-WL46-2926-SM-3LK82 50.4
GTEX-Y8DK-0826-SM-4TT3T 50.4
GTEX-13S7M-3126-SM-5RQJQ 49.9
GTEX-XOTO-3026-SM-4B65M 49.8
GTEX-13QIC-2926-SM-5J2NF 49.7
GTEX-132Q8-3026-SM-5PNVG 49.6
GTEX-131YS-3126-SM-5KLYT 49.5
GTEX-12ZZX-2926-SM-5GCOQ 49.0
GTEX-147GR-3026-SM-5S2ML 48.7
GTEX-11NUK-2926-SM-5A5MD 48.6
GTEX-14ASI-3026-SM-5S2PN 47.9
GTEX-T6MN-2626-SM-32PMQ 47.9
GTEX-13X6J-3026-SM-5Q5CU 47.6
GTEX-14A5I-2926-SM-5Q5CQ 47.3
GTEX-11WQK-3026-SM-5EQL6 46.8
GTEX-Z93S-2926-SM-57WB9 46.8
GTEX-13FXS-3126-SM-5J2NN 46.3
GTEX-N7MT-1126-SM-5SI7V 45.7
GTEX-R55F-1326-SM-5S2V4 45.5
GTEX-144GL-3026-SM-5Q5CW 45.1
GTEX-13VXU-2926-SM-5LU5C 44.8
GTEX-13OW7-3026-SM-5L3GY 44.1
GTEX-1128S-2726-SM-5H12C 44.0
GTEX-13NYS-3126-SM-5KLYV 43.7
GTEX-12ZZZ-3026-SM-5BC67 43.4
GTEX-145MH-3026-SM-5Q5DZ 43.0
GTEX-X585-3026-SM-46MWF 43.0
GTEX-WWYW-3126-SM-3NB39 42.2
GTEX-ZUA1-3026-SM-59HJC 41.7
GTEX-QDT8-2926-SM-32PKC 41.5
GTEX-11ZUS-2926-SM-5FQSL 41.2
GTEX-NPJ7-2726-SM-2I3FT 41.2
GTEX-RNOR-2326-SM-2TF4I 41.2
GTEX-ZZPT-3026-SM-5GZXH 41.2
GTEX-111FC-3126-SM-5GZZ2 41.1
GTEX-PWO3-0926-SM-2I5EY 40.6
GTEX-13PL6-3126-SM-5LUAR 40.1
GTEX-13IVO-2926-SM-5L3CZ 39.1
GTEX-ZAK1-3026-SM-5S2MJ 38.8
GTEX-WHSE-3026-SM-3P5ZH 38.4
GTEX-WZTO-2926-SM-3NM9I 37.5
GTEX-12WSH-3026-SM-5CVNI 37.1
GTEX-13NYC-2826-SM-5K7WR 36.9
GTEX-OXRN-2426-SM-2I5EQ 36.5
GTEX-T2IS-3026-SM-32QPM 34.5
GTEX-TSE9-3026-SM-3DB76 32.2
GTEX-11OF3-2926-SM-5HL78 30.7
GTEX-11O72-2926-SM-5BC4V 28.4
GTEX-QMR6-1426-SM-32PLA 28.3
GTEX-X4XX-3026-SM-3NMB2 26.4
GTEX-UTHO-3026-SM-3GAFB 24.6
GTEX-PVOW-2526-SM-2XCF7 24.3
Show all
 

Brain - Frontal Cortex (BA9)

Brain - Frontal Cortex (BA9)
RPKM: 55.8
Samples: 108

Max RPKM: 101.6
Min RPKM: 25.1
Std RPKM: 14.6
Median RPKM: 56.2
GTEX-12WSD-0011-R10b-SM-5GU79 101.6
GTEX-13O3O-0011-R10a-SM-5LUA9 98.8
GTEX-13JVG-0011-R10b-SM-5KM2P 90.5
GTEX-13NYS-0011-R10a-SM-5MR4S 88.5
GTEX-12ZZW-0011-R10b-SM-5HL9X 83.2
GTEX-ZE7O-0011-R10a-SM-57WAZ 83.0
GTEX-13SLX-0011-R10a-SM-5P9HV 80.6
GTEX-13NYB-0011-R10a-SM-5KM43 77.4
GTEX-ZAB4-0011-R10a-SM-4SOKH 77.0
GTEX-12WSA-0011-R10b-SM-5P9ET 76.8
GTEX-139TS-0011-R10a-SM-5K7TU 74.6
GTEX-N7MT-0011-R10A-SM-2I3E1 72.5
GTEX-12ZZY-0011-R10b-SM-5HL7W 72.0
GTEX-11H98-0011-R10b-SM-5NQ98 70.2
GTEX-13OW7-0011-R10a-SM-5L3H3 70.2
GTEX-13SLW-0011-R10a-SM-5S2UI 69.1
GTEX-13FLW-0011-R10b-SM-5LZZF 69.0
GTEX-RVPU-0011-R10A-SM-2XCAH 68.3
GTEX-147GR-0011-R10b-SM-5S2UM 68.2
GTEX-12WSC-0011-R10a-SM-5GU57 67.5
GTEX-13OW6-0011-R10a-SM-5L3HE 66.8
GTEX-13FHO-0011-R10b-SM-5J2MM 65.5
GTEX-13JUV-0011-R10b-SM-5LZXR 65.4
GTEX-13FXS-0011-R10a-SM-5J2MA 65.3
GTEX-13CZV-0011-R10b-SM-5LZYD 64.9
GTEX-ZUA1-0011-R10a-SM-51MT6 64.9
GTEX-131XW-0011-R10a-SM-5DUVA 64.7
GTEX-13OVJ-0011-R10b-SM-5L3HT 64.7
GTEX-13OW8-0011-R10a-SM-5L3H6 64.7
GTEX-ZVZQ-0011-R10b-SM-51MRT 64.6
GTEX-12ZZZ-0011-R10a-SM-5P9HC 63.2
GTEX-13X6I-0011-R10a-SM-5PNWI 62.0
GTEX-1477Z-0011-R10b-SM-5S2RF 61.9
GTEX-ZDXO-0011-R10a-SM-4WWD8 61.9
GTEX-1445S-0011-R10a-SM-5PNWB 61.8
GTEX-14ASI-0011-R10b-SM-5S2VZ 61.8
GTEX-13RTJ-0011-R10b-SM-5O9CW 61.4
GTEX-13X6K-0011-R10a-SM-5P9JR 61.1
GTEX-XMD1-0011-R10A-SM-4AT4A 61.0
GTEX-14BIN-0011-R10a-SM-5S2UA 60.2
GTEX-ZVT3-0011-R10b-SM-57WB6 59.7
GTEX-145LS-0011-R10a-SM-5PNUQ 59.0
GTEX-11GSP-0011-R10a-SM-5NQ7J 58.6
GTEX-14BIL-0011-R10a-SM-5SI75 57.8
GTEX-13X6J-0011-R10b-SM-5PNWA 57.7
GTEX-145MG-0011-R10a-SM-5PNWG 57.7
GTEX-XLM4-0011-R10A-SM-4AT5P 57.1
GTEX-N7MS-0011-R10A-SM-2HMJK 56.9
GTEX-13FLV-0011-R10b-SM-5LZZ2 56.5
GTEX-13FTZ-0011-R10b-SM-5KLZS 56.5
GTEX-13N1W-0011-R10b-SM-5MR4H 56.5
GTEX-ZXG5-0011-R10a-SM-57WDD 56.5
GTEX-ZV68-0011-R10a-SM-51MT7 56.4
GTEX-132Q8-0011-R10b-SM-5DUWZ 56.2
GTEX-NL4W-0011-R10A-SM-2I3DY 56.2
GTEX-11WQC-0011-R10a-SM-57WCT 55.8
GTEX-13O3Q-0011-R10b-SM-5KM39 55.7
GTEX-147F4-0011-R10b-SM-5S2WC 55.7
GTEX-Z93S-0011-R10a-SM-4RGNM 55.5
GTEX-13G51-0011-R10b-SM-5LZYF 54.7
GTEX-12WSM-0011-R10a-SM-5DUWV 54.3
GTEX-1313W-0011-R10b-SM-5DUXA 52.2
GTEX-131XH-0011-R10a-SM-5EGLJ 52.1
GTEX-145LU-0011-R10a-SM-5PNWJ 51.9
GTEX-13QIC-0011-R10a-SM-5O9C7 51.8
GTEX-13OVL-0011-R10a-SM-5L3GS 51.6
GTEX-P44H-0011-R10A-SM-2XCEK 51.1
GTEX-11WQK-0011-R10a-SM-5BC6R 51.0
GTEX-131YS-0011-R10b-SM-5EQ5N 50.4
GTEX-12WSF-0011-R10a-SM-5LZVH 48.9
GTEX-13S7M-0011-R10b-SM-5PNZB 48.3
GTEX-TSE9-0011-R10A-SM-3DB7O 48.3
GTEX-12WSH-0011-R10a-SM-5LZUS 47.7
GTEX-ZF28-0011-R10a-SM-4WWEH 47.7
GTEX-13NZA-0011-R10b-SM-5KM54 47.6
GTEX-YFC4-0011-R10a-SM-4SOK5 47.3
GTEX-YJ89-0011-R10a-SM-4SOK9 47.2
GTEX-NPJ8-0011-R10A-SM-2YUMO 46.9
GTEX-T5JC-0011-R10A-SM-32PM2 46.6
GTEX-14753-0011-R10b-SM-5S2WE 46.4
GTEX-12WSE-0011-R10b-SM-5P9JV 45.8
GTEX-X261-0011-R10B-SM-4E3JT 45.8
GTEX-12ZZX-0011-R10b-SM-5DUWK 45.6
GTEX-Y8DK-0011-R10A-SM-4SOK1 43.9
GTEX-NPJ7-0011-R10A-SM-2I3E5 43.6
GTEX-T6MN-0011-R10A-SM-32QP7 42.2
GTEX-11ZUS-0011-R10b-SM-5BC79 41.4
GTEX-Q2AG-0011-R10A-SM-2HMLA 41.4
GTEX-NL3H-0011-R10A-SM-2I3E9 41.2
GTEX-WVLH-0011-R10A-SM-3MJFM 41.0
GTEX-X4EP-0011-R10B-SM-4QASJ 41.0
GTEX-QVJO-0011-R10A-SM-2S1QJ 40.5
GTEX-13N2G-0011-R10a-SM-5MR34 39.5
GTEX-12126-0011-R10b-SM-5BC6T 39.1
GTEX-WWYW-0011-R10A-SM-3NB35 38.9
GTEX-145MH-0011-R10b-SM-5PNUK 38.7
GTEX-WL46-0011-R10A-SM-3MJFQ 38.3
GTEX-13QJC-0011-R10a-SM-5SI63 38.2
GTEX-OXRN-0011-R10A-SM-2I5GC 38.2
GTEX-X585-0011-R10A-SM-46MUY 37.0
GTEX-OXRO-0011-R10A-SM-2I5EH 36.8
GTEX-S7SE-0011-R10A-SM-2XCDF 36.0
GTEX-WZTO-0011-R10B-SM-4E3KB 35.6
GTEX-QMR6-0011-R10A-SM-32PKO 33.7
GTEX-QVUS-0011-R10A-SM-3GIK3 30.3
GTEX-13IVO-0011-R10a-SM-5LZY3 29.8
GTEX-QDT8-0011-R10A-SM-32PKG 26.7
GTEX-X4XX-0011-R10B-SM-46MWO 25.1
Show all

CEREBRAL CORTEX - FANTOM5 CAGE

No Fantom CAGE analysis found for this gene / tissue

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