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ATP1A3
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TISSUE ATLAS PRIMARY DATA CAUDATE

GENE/PROTEIN

Antibody validation


Dictionary

Caudate

CAUDATE - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:51.1RPKM
FANTOM5:277.7Tags Per Million

CAUDATE - Annotated protein expression

Annotated protein
expression

Glial cells:Not detected
Neuronal cells:Not detected
 

Antibody staining

Antibody HPA045367

 

Antibody HPA056446

 

Antibody CAB033630

 

Glial cells

Not detected   Low   Not detected  

Neuronal cells

Not detected   Not detected   Not detected  
     
     
     

CAUDATE - HPA RNA-seq

Pending HPA RNA-seq analysis


CAUDATE - GTEx RNA-seq

Average RPKM

51.1

GTEx sample id

RPKM

 

Brain - Caudate (basal ganglia)

Brain - Caudate (basal ganglia)
RPKM: 51.1
Samples: 117

Max RPKM: 110.2
Min RPKM: 3.8
Std RPKM: 28.4
Median RPKM: 50.5
GTEX-145LS-0011-R5a-SM-5SI65 110.2
GTEX-13O3Q-0011-R5b-SM-5P9H4 110.0
GTEX-13SLX-0011-R5a-SM-5O9BV 102.1
GTEX-13X6J-0011-R5b-SM-5PNWT 102.0
GTEX-145MH-0011-R5a-SM-5P9JT 100.0
GTEX-13G51-0011-R5a-SM-5L3EB 96.8
GTEX-13VXU-0011-R5a-SM-5O9D7 95.7
GTEX-X585-0011-R5A-SM-46MVI 95.5
GTEX-N7MS-0011-R5a-SM-2HMK8 92.4
GTEX-Q2AG-0011-R5A-SM-2HMJH 92.4
GTEX-WZTO-0011-R5B-SM-3NMC5 90.0
GTEX-131YS-0011-R5b-SM-5K7YB 86.9
GTEX-139TT-0011-R5b-SM-5K7W8 85.7
GTEX-12ZZY-0011-R5a-SM-5EGL9 85.0
GTEX-WL46-0011-R5A-SM-3LK6V 84.3
GTEX-S7SE-0011-R5A-SM-2XCDA 84.1
GTEX-QVJO-0011-R5A-SM-2S1QM 82.6
GTEX-12WSC-0011-R5b-SM-5CVNS 81.4
GTEX-UTHO-0011-R5A-SM-3GIJD 80.7
GTEX-13FXS-0011-R5b-SM-5LZYE 79.9
GTEX-11GSP-0011-R5a-SM-57WBE 79.1
GTEX-14ABY-0011-R5b-SM-5SI7B 78.2
GTEX-1313W-0011-R5b-SM-5L3EP 78.0
GTEX-13FLW-0011-R5a-SM-5LZX6 78.0
GTEX-1399T-0011-R5b-SM-5IJDK 77.9
GTEX-13RTJ-0011-R5a-SM-5P9HR 77.9
GTEX-13OVL-0011-R5b-SM-5L3FU 77.7
GTEX-N7MT-0011-R5a-SM-2I3G6 76.8
GTEX-14BIM-0011-R5b-SM-5S2RM 76.4
GTEX-TSE9-0011-R5A-SM-3DB7J 76.2
GTEX-13OW6-0011-R5a-SM-5O9BK 75.4
GTEX-13S7M-0011-R5b-SM-5P9HS 75.2
GTEX-11NV4-0011-R5a-SM-5NQ88 75.1
GTEX-13X6K-0011-R5b-SM-5PNUE 74.8
GTEX-T5JC-0011-R5A-SM-32PLK 70.8
GTEX-13N1W-0011-R5b-SM-5MR5Q 69.9
GTEX-T6MN-0011-R5A-SM-32QPD 69.7
GTEX-WVLH-0011-R5A-SM-3MJFW 68.0
GTEX-Z93S-0011-R5b-SM-4RGNI 66.9
GTEX-13FHO-0011-R5b-SM-5LZZ3 65.9
GTEX-WWYW-0011-R5A-SM-3NB3E 65.5
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 64.8
GTEX-13OW8-0011-R5b-SM-5L3FQ 64.3
GTEX-WHSE-0011-R5A-SM-3P5ZO 64.3
GTEX-NL3H-0011-R5a-SM-2I3GB 64.1
GTEX-11OF3-0011-R5a-SM-57WB4 63.5
GTEX-13O3O-0011-R5b-SM-5KM44 62.3
GTEX-13NYB-0011-R5a-SM-5MR45 62.1
GTEX-13OW5-0011-R5b-SM-5L3FR 62.1
GTEX-R55E-0011-R5A-SM-2TC5N 57.8
GTEX-PVOW-0011-R5A-SM-32PL7 56.7
GTEX-13OW7-0011-R5b-SM-5O9DM 56.4
GTEX-ZE9C-0011-R5a-SM-5EGLO 55.4
GTEX-ZUA1-0011-R5b-SM-51MTG 54.4
GTEX-11H98-0011-R5b-SM-57WCF 53.2
GTEX-RVPV-0011-R5A-SM-2TF69 51.7
GTEX-Y8DK-0011-R5B-SM-4RTW6 51.6
GTEX-13NYS-0011-R5a-SM-5MR4D 50.8
GTEX-NL4W-0011-R5a-SM-2I3GD 50.5
GTEX-T2IS-0011-R5A-SM-32QP4 49.9
GTEX-ZAB4-0011-R5a-SM-4SOKC 49.5
GTEX-13FLV-0011-R5a-SM-5LZWT 48.2
GTEX-13OVH-0011-R5b-SM-5KM4L 48.0
GTEX-P44H-0011-R5A-SM-2XCEX 47.7
GTEX-12WSF-0011-R5a-SM-5HL8K 47.6
GTEX-13JUV-0011-R5a-SM-5LZY5 47.1
GTEX-13X6I-0011-R5a-SM-5PNWW 46.4
GTEX-132Q8-0011-R5a-SM-5IJDM 46.0
GTEX-12ZZX-0011-R5a-SM-5HL89 45.5
GTEX-12WSM-0011-R5a-SM-5EQ4Y 45.4
GTEX-RU72-0011-R5A-SM-2TF6U 44.0
GTEX-NPJ8-0011-R5a-SM-2HMJY 43.8
GTEX-12WSD-0011-R5b-SM-5CVNG 41.7
GTEX-14BIN-0011-R5b-SM-5SI78 38.9
GTEX-OHPN-0011-R5A-SM-2I5FF 37.6
GTEX-RVPU-0011-R5A-SM-2XCAD 37.3
GTEX-13CZV-0011-R5a-SM-5K7XA 37.2
GTEX-XOTO-0011-R5A-SM-4B657 36.8
GTEX-ZXG5-0011-R5b-SM-57WBN 36.8
GTEX-13SLW-0011-R5b-SM-5SI6Z 36.5
GTEX-YFC4-0011-R5a-SM-4RGLR 34.4
GTEX-PWO3-0011-R5A-SM-2I5EZ 33.5
GTEX-12WSB-0011-R5b-SM-5GU67 33.1
GTEX-ZE7O-0011-R5a-SM-57WBO 31.5
GTEX-12WSH-0011-R5b-SM-5P9F3 27.9
GTEX-13JVG-0011-R5a-SM-5MR4O 27.5
GTEX-QMR6-0011-R5A-SM-32PKT 25.3
GTEX-ZVZQ-0011-R5b-SM-57WDC 25.2
GTEX-OXRN-0011-R5A-SM-2I5EF 23.4
GTEX-XMD1-0011-R5A-SM-4AT47 23.1
GTEX-12ZZW-0011-R5a-SM-5DUVN 22.1
GTEX-144GO-0011-R5a-SM-5PNUR 19.9
GTEX-13CIG-0011-R5b-SM-5L3F2 19.5
GTEX-YJ89-0011-R5a-SM-4V6GM 19.2
GTEX-X4XX-0011-R5A-SM-46MWN 18.8
GTEX-13PVQ-0011-R5b-SM-5O9DI 18.2
GTEX-13OVJ-0011-R5a-SM-5P9H7 17.6
GTEX-13PLJ-0011-R5a-SM-5O9BG 17.6
GTEX-13112-0011-R5b-SM-5DUV8 16.7
GTEX-ZF28-0011-R5a-SM-4WWCZ 16.4
GTEX-X261-0011-R5A-SM-3NMB4 15.6
GTEX-11WQC-0011-R5a-SM-5BC74 15.1
GTEX-12WSA-0011-R5b-SM-5GU5I 14.8
GTEX-ZVT3-0011-R5a-SM-51MSI 13.7
GTEX-144GL-0011-R5b-SM-5PNUJ 13.5
GTEX-139TS-0011-R5b-SM-5J2MZ 11.5
GTEX-NPJ7-0011-R5a-SM-33HBK 11.2
GTEX-13FHP-0011-R5b-SM-5LZY2 10.3
GTEX-ZV68-0011-R5a-SM-4YCDW 10.0
GTEX-1445S-0011-R5a-SM-5PNUS 8.4
GTEX-13CF2-0011-R5a-SM-5LZWS 7.4
GTEX-1477Z-0011-R5b-SM-5PNUO 7.1
GTEX-13NZA-0011-R5b-SM-5KM4K 6.3
GTEX-145MG-0011-R5b-SM-5S2VU 4.7
GTEX-S7PM-0011-R5A-SM-3NM8G 4.6
GTEX-11UD1-0011-R5b-SM-5P9FP 4.3
GTEX-139T8-0011-R5b-SM-5J1MO 3.8
Show all

CAUDATE - FANTOM5 CAGE

Average Tags Per Million

277.7

FANTOM5 sample id

Sample description

Tags Per Million

Caudate nucleus
Tags Per Million: 277.7
FF:10164-103B2 76 years, female 353.7
FF:10379-105H1 89 years, female 201.7

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