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TISSUE ATLAS PRIMARY DATA BREAST

GENE/PROTEIN

Antibody validation


Dictionary

Breast

BREAST - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:824.9TPM
GTEx:377.5RPKM
FANTOM5:270.2Tags Per Million

BREAST - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Glandular cells:Not detected
Myoepithelial cells:High
 

Antibody staining

Antibody HPA041264

 

Antibody HPA041271

 

Antibody CAB000002

 

Antibody CAB013531

 

Adipocytes

High   Not detected   Not detected   Not detected  

Glandular cells

High   Low   Not detected   Not detected  

Myoepithelial cells

High   High   High   High  
       
       
       

BREAST - HPA RNA-seq

Average TPM

824.9

overview Female, age 52
Sample 1
TPM: 593.6
Cell types%
Glandular cells: 15
Adipocytes: 5
Other cell types: 80
overview Female, age 80
Sample 2
TPM: 863.2
Cell types%
Glandular cells: 5
Adipocytes: 15
Other cell types: 80
overview Female, age 47
Sample 3
TPM: 699.9
Cell types%
Glandular cells: 5
Adipocytes: 5
Other cell types: 90
overview Female, age 38
Sample 4
TPM: 1143.0
Cell types%
Glandular cells: 40
Adipocytes: 5
Other cell types: 55

BREAST - GTEx RNA-seq

Average RPKM

377.5

GTEx sample id

RPKM

 

Breast - Mammary Tissue

Breast - Mammary Tissue
RPKM: 377.5
Samples: 214

Max RPKM: 1102.5
Min RPKM: 27.6
Std RPKM: 235.3
Median RPKM: 338.6
GTEX-YJ8O-2226-SM-5IFHW 1102.5
GTEX-12WSM-1726-SM-5BC6J 1088.2
GTEX-13PL6-2926-SM-5L3I2 1056.8
GTEX-QVJO-1826-SM-447C9 931.8
GTEX-147F4-2826-SM-5NQBN 922.9
GTEX-13CF2-2026-SM-5K7VI 918.2
GTEX-ZF3C-2326-SM-5S2MZ 873.6
GTEX-ZVT2-1826-SM-5NQ8W 873.4
GTEX-VJWN-0726-SM-3GIJ8 871.8
GTEX-W5X1-2326-SM-3GIL6 835.2
GTEX-144GL-2026-SM-5LU3O 828.6
GTEX-Y111-2026-SM-4SOJA 824.0
GTEX-11WQC-1726-SM-5GU4W 792.4
GTEX-12WSK-2226-SM-5GCO5 777.8
GTEX-XYKS-1326-SM-4BRUN 771.9
GTEX-11NV4-2026-SM-5N9DG 769.5
GTEX-11DXW-0626-SM-5N9ER 736.5
GTEX-TML8-1226-SM-32QON 728.8
GTEX-QDT8-0626-SM-48TYW 725.2
GTEX-11GS4-2126-SM-5A5KR 724.7
GTEX-X4EP-2926-SM-3P5YQ 715.9
GTEX-R3RS-0626-SM-48FE1 715.3
GTEX-Q2AG-0326-SM-48U1O 713.0
GTEX-12ZZX-1126-SM-5EGKB 706.9
GTEX-11P7K-0726-SM-5EGKX 699.2
GTEX-145MN-1926-SM-5SIAI 698.0
GTEX-WI4N-1426-SM-3LK7H 689.8
GTEX-WYBS-0926-SM-3NM94 688.6
GTEX-11PRG-0826-SM-5EQ6A 686.6
GTEX-ZU9S-1926-SM-5NQBP 684.0
GTEX-SE5C-2126-SM-4BRUJ 665.0
GTEX-RU72-0626-SM-46MUI 660.6
GTEX-Y3I4-1526-SM-4TT7K 660.5
GTEX-Y5LM-1726-SM-4VDSX 657.5
GTEX-XOT4-0726-SM-4GIAW 644.0
GTEX-13O3Q-2226-SM-5KM4O 638.2
GTEX-13O3O-0826-SM-5K7WE 637.7
GTEX-X15G-1626-SM-3NMB3 630.2
GTEX-131YS-0626-SM-5EGKL 628.2
GTEX-ZEX8-2226-SM-57WC6 613.2
GTEX-14753-2426-SM-5LU8U 604.6
GTEX-13113-1726-SM-5GCOO 593.2
GTEX-13OW8-0226-SM-5K7UP 575.9
GTEX-WXYG-2226-SM-4E3IM 565.2
GTEX-11TT1-2126-SM-5GU5Y 553.2
GTEX-XMD2-0926-SM-4WWEF 552.2
GTEX-YFC4-1426-SM-5IFJG 529.8
GTEX-1314G-1226-SM-5BC6D 528.8
GTEX-13OW5-2226-SM-5L3HC 528.1
GTEX-11WQK-2426-SM-5GU5C 527.8
GTEX-Y5V5-2126-SM-4WWFO 522.9
GTEX-ZXES-0826-SM-5E43C 521.9
GTEX-ZVT4-1026-SM-57WC4 518.1
GTEX-ZF29-1926-SM-5S2P1 515.4
GTEX-13W3W-1226-SM-5LU4H 511.4
GTEX-ZLV1-1426-SM-4WWES 509.8
GTEX-RWS6-1926-SM-47JXY 501.7
GTEX-13FTY-2226-SM-5J1ND 499.6
GTEX-14ABY-2126-SM-5QGQZ 499.4
GTEX-Y3IK-2326-SM-4WWDT 497.6
GTEX-ZYFC-0826-SM-5E44K 497.5
GTEX-13W46-0826-SM-5LU3H 497.4
GTEX-Y8E4-1626-SM-5S2MW 494.0
GTEX-11DXY-2326-SM-5GICW 487.0
GTEX-11EQ9-1826-SM-5Q5AJ 479.2
GTEX-ZC5H-2626-SM-5J2MG 471.5
GTEX-13NZ8-0126-SM-5IJCT 464.6
GTEX-ZVTK-0326-SM-51MRR 464.0
GTEX-R55F-1726-SM-2TF4R 460.2
GTEX-UJHI-1426-SM-3DB9C 457.5
GTEX-WYJK-1326-SM-3NB2T 452.7
GTEX-T5JC-2126-SM-32PMO 449.4
GTEX-14AS3-1626-SM-5S2OY 444.8
GTEX-ZZPU-0626-SM-5E43T 441.4
GTEX-WRHU-0326-SM-3MJFY 439.9
GTEX-ZVZQ-0826-SM-51MRF 435.4
GTEX-13N11-1726-SM-5J1OJ 431.0
GTEX-ZY6K-1626-SM-5GZWV 426.8
GTEX-11EI6-0626-SM-5985T 422.3
GTEX-WOFL-0826-SM-3MJG1 420.5
GTEX-WYVS-1726-SM-3NMAY 409.5
GTEX-ZAJG-0626-SM-5HL8X 408.9
GTEX-VUSG-2226-SM-4KKZO 407.2
GTEX-131XW-0726-SM-5EGK3 406.9
GTEX-XUJ4-1926-SM-4BOOV 405.9
GTEX-ZF2S-2026-SM-5E461 402.4
GTEX-1269C-2426-SM-5FQSN 399.9
GTEX-1117F-2826-SM-5GZXL 399.1
GTEX-UPK5-2326-SM-3P5Z8 397.4
GTEX-ZYWO-2326-SM-5GZY4 397.4
GTEX-XUZC-1626-SM-4BRVP 395.3
GTEX-T5JW-2026-SM-4DM63 393.0
GTEX-S4P3-1326-SM-4AD6V 383.4
GTEX-ZUA1-1526-SM-59HLS 369.5
GTEX-S7SE-0826-SM-4AT4D 368.4
GTEX-XBED-1626-SM-47JYN 365.3
GTEX-12WSB-0626-SM-59HJO 364.8
GTEX-1122O-1226-SM-5H113 364.0
GTEX-Y8LW-1626-SM-5IFHX 362.2
GTEX-T2IS-1526-SM-32QPR 361.6
GTEX-13QIC-2326-SM-5LU5N 358.3
GTEX-1313W-0826-SM-5EQ4T 354.8
GTEX-T6MN-0726-SM-32PML 353.3
GTEX-13NZB-2126-SM-5MR4Y 350.5
GTEX-1399U-1826-SM-5PNZ1 340.7
GTEX-ZYW4-0826-SM-5GIDG 340.6
GTEX-132NY-0826-SM-5K7Y7 340.1
GTEX-YB5E-1726-SM-5IFJ3 337.0
GTEX-U3ZH-1426-SM-4DXSR 334.8
GTEX-X4XY-0926-SM-4E3JD 333.0
GTEX-S32W-2026-SM-4AD6E 330.8
GTEX-146FH-0826-SM-5SI8T 329.7
GTEX-ZTTD-1026-SM-51MRD 324.3
GTEX-11O72-2126-SM-5N9FO 323.1
GTEX-11OF3-1926-SM-59889 310.8
GTEX-XUW1-2326-SM-4BOO5 310.5
GTEX-11P81-1926-SM-5BC53 307.3
GTEX-12KS4-0126-SM-5Q5A5 305.5
GTEX-139T8-0826-SM-5L3DE 304.6
GTEX-133LE-1726-SM-5K7VQ 301.7
GTEX-ZTX8-1226-SM-4YCE9 295.4
GTEX-Y114-2026-SM-4TT7L 293.7
GTEX-14E6E-1326-SM-5S2NR 292.6
GTEX-13D11-1026-SM-5IJFB 291.8
GTEX-145MO-0826-SM-5NQBL 290.0
GTEX-ZWKS-2826-SM-5NQ74 283.3
GTEX-11EMC-2026-SM-5A5JV 283.0
GTEX-11ZUS-0826-SM-5FQUY 282.7
GTEX-ZVE2-1226-SM-5NQ8R 282.6
GTEX-13FTX-1126-SM-5N9EN 275.8
GTEX-SIU7-1626-SM-4BRUK 272.7
GTEX-XQ3S-1326-SM-4BOPQ 271.0
GTEX-145LT-0726-SM-5S2VM 268.5
GTEX-ZYT6-0126-SM-5E45J 265.4
GTEX-T2YK-2226-SM-32QPT 264.8
GTEX-13NZ9-1026-SM-5MR5K 262.4
GTEX-139TU-0626-SM-5KM3X 262.1
GTEX-11EM3-1326-SM-5N9C6 247.5
GTEX-R53T-1526-SM-48FEK 241.5
GTEX-ZV6S-1826-SM-5NQ8D 240.5
GTEX-ZV7C-1826-SM-5NQ83 240.5
GTEX-XV7Q-2326-SM-4BRVZ 238.8
GTEX-S4Q7-1126-SM-4AD6R 236.2
GTEX-111YS-1926-SM-5GICC 233.7
GTEX-XMD1-0826-SM-4AT52 232.4
GTEX-139T6-1626-SM-5PNYZ 228.2
GTEX-TMMY-0726-SM-33HBE 226.2
GTEX-117YX-1426-SM-5H12H 224.3
GTEX-13O3P-0826-SM-5L3DH 223.1
GTEX-QEL4-2126-SM-447AE 214.4
GTEX-U3ZN-1926-SM-4DXSG 213.0
GTEX-13N1W-0626-SM-5MR4U 209.8
GTEX-ZZ64-1226-SM-5E43R 209.3
GTEX-13S86-1226-SM-5S2OA 206.0
GTEX-11DXZ-1926-SM-5GZZL 203.0
GTEX-TKQ2-1826-SM-33HB2 200.2
GTEX-T6MO-0326-SM-32QOK 188.4
GTEX-ZAB4-2526-SM-5HL8M 186.5
GTEX-WY7C-2726-SM-3NB3P 184.1
GTEX-ZDTT-2126-SM-5S2OJ 181.8
GTEX-12WSN-1326-SM-5GCNT 180.6
GTEX-ZQUD-1926-SM-51MSA 179.7
GTEX-Y9LG-1426-SM-5IFJZ 178.6
GTEX-XQ8I-2426-SM-4WAXY 176.3
GTEX-1211K-1926-SM-5EQLB 173.8
GTEX-S341-1526-SM-4AD6K 173.1
GTEX-ZPIC-1126-SM-5BC7F 170.3
GTEX-11LCK-2426-SM-5HL5F 164.5
GTEX-QEG5-0726-SM-4R1JQ 161.4
GTEX-ZDXO-0126-SM-5S2ND 160.4
GTEX-R55D-0826-SM-48FEA 158.3
GTEX-13PVQ-1026-SM-5KM3M 156.0
GTEX-11I78-2226-SM-5PNYA 151.1
GTEX-YEC3-1026-SM-5IFI5 150.5
GTEX-13FTW-1426-SM-5LZWZ 150.4
GTEX-12BJ1-1826-SM-5HL9N 147.7
GTEX-11P82-1326-SM-5HL62 146.5
GTEX-1192X-2326-SM-5987X 143.8
GTEX-132Q8-1426-SM-5EGK7 142.2
GTEX-X261-0626-SM-3NMD9 141.9
GTEX-S33H-0326-SM-4AD6N 141.5
GTEX-U412-1826-SM-4DXTJ 140.6
GTEX-S4UY-0726-SM-4AD6X 135.4
GTEX-13O61-1826-SM-5KM4I 126.3
GTEX-REY6-2426-SM-48FF5 123.0
GTEX-117XS-1926-SM-5GICO 121.2
GTEX-RUSQ-2026-SM-4GIAK 120.4
GTEX-WFON-1826-SM-3GILG 117.2
GTEX-13FHO-0826-SM-5L3E8 113.0
GTEX-11NSD-0926-SM-5N9DR 108.4
GTEX-11ONC-2126-SM-5HL6E 107.0
GTEX-ZA64-1526-SM-5CVMD 104.2
GTEX-QMRM-1626-SM-4R1KV 103.4
GTEX-11GSO-1926-SM-5A5K3 99.2
GTEX-TKQ1-0226-SM-33HB5 98.7
GTEX-ZLFU-2126-SM-4WWEV 98.0
GTEX-11DZ1-0326-SM-5N9BN 97.4
GTEX-ZT9W-2026-SM-51MRA 91.3
GTEX-145ME-1526-SM-5Q5F2 91.0
GTEX-YFCO-1826-SM-4W1YH 85.6
GTEX-11TUW-1826-SM-5BC5D 84.5
GTEX-132AR-0826-SM-5EGK6 80.7
GTEX-Y5V6-2126-SM-4WWFX 79.8
GTEX-YB5K-1626-SM-5IFIN 79.6
GTEX-11ZTT-2326-SM-5EQLG 77.7
GTEX-UTHO-1026-SM-3GAF7 64.7
GTEX-XGQ4-0926-SM-4AT4U 64.7
GTEX-ZQG8-0726-SM-5P9H9 61.2
GTEX-U8XE-0826-SM-4E3J1 58.0
GTEX-ZDYS-1126-SM-5K7UB 56.9
GTEX-144GM-0926-SM-5O994 53.7
GTEX-XMK1-1126-SM-4IHJ8 42.7
GTEX-PSDG-1626-SM-48TCQ 37.9
GTEX-13CF3-2126-SM-5IFJP 27.6
Show all

BREAST - FANTOM5 CAGE

Average Tags Per Million

270.2

FANTOM5 sample id

Sample description

Tags Per Million

Breast
Tags Per Million: 270.2
FF:10080-102A8 77 years, female 270.2

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