Tissue expression of ACTA2 - Staining in cerebral cortex - The Human Protein Atlas

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ACTA2

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TISSUE

CELL

CANCER

TISSUE ATLAS PRIMARY DATA CEREBRAL CORTEX

GENE/PROTEIN

Antibody validation

Dictionary
	Cerebral cortex


Tissue proteome
	Brain
	Extended brain samples

CEREBRAL CORTEX - Expression summary

Protein expression

h

m

l

n

RNA expression

HPA:	51.1	TPM
GTEx:	11.2	RPKM

CEREBRAL CORTEX - Annotated protein expression

Annotated protein
expression

Endothelial cells:	Not detected
Glial cells:	Not detected
Neuronal cells:	Not detected
Neuropil:	Not detected

Antibody staining	Antibody HPA041264		Antibody HPA041271		Antibody CAB000002		Antibody CAB013531
Endothelial cells	Low		Low		Not detected		Not detected
Glial cells	Not detected		Not detected		Not detected		Not detected
Neuronal cells	Not detected		Not detected		Not detected		Not detected
Neuropil	Medium		Not detected		Not detected		Low

CEREBRAL CORTEX - HPA RNA-seq

Average TPM	51.1

N/A

Male, age 5

Sample 1
TPM: 75.7

overview

Female, age 40

Sample 2
TPM: 33.4

Cell types%

Neuronal cells: 35
Glial cells and endothelial cells: 65

overview

Male, age 70

Sample 3
TPM: 44.3

Cell types%

Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM	11.2

GTEx sample id

RPKM

Brain - Cortex

Brain - Cortex
RPKM: 13.6

Samples: 114

Max RPKM: 296
Min RPKM: 2
Std RPKM: 29
Median RPKM: 6.9

GTEX-WZTO-2926-SM-3NM9I

296.0

GTEX-13JVG-3126-SM-5L3FH

64.0

GTEX-ZZPT-3026-SM-5GZXH

59.6

GTEX-1399T-3026-SM-5KLZC

48.9

GTEX-132Q8-3026-SM-5PNVG

45.2

GTEX-11ONC-2926-SM-5P9JM

42.6

GTEX-144FL-3026-SM-5O99C

41.7

GTEX-12126-1026-SM-5P9JJ

39.4

Show all

Brain - Frontal Cortex (BA9)

Brain - Frontal Cortex (BA9)
RPKM: 8.8

Samples: 108

Max RPKM: 247.5
Min RPKM: 1.9
Std RPKM: 24
Median RPKM: 4.5

GTEX-11ZUS-0011-R10b-SM-5BC79

247.5

GTEX-QVUS-0011-R10A-SM-3GIK3

48.3

GTEX-XLM4-0011-R10A-SM-4AT5P

37.1

GTEX-NPJ7-0011-R10A-SM-2I3E5

28.2

GTEX-N7MT-0011-R10A-SM-2I3E1

24.8

GTEX-QVJO-0011-R10A-SM-2S1QJ

24.7

GTEX-X4EP-0011-R10B-SM-4QASJ

20.3

GTEX-NL4W-0011-R10A-SM-2I3DY

17.9

Show all

CEREBRAL CORTEX - FANTOM5 CAGE
No Fantom CAGE analysis found for this gene / tissue

Contact

contact@proteinatlas.org

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.