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Field

Term
Gene name

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External id

In atlas

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Reliability

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Validation

Method

Validation

Method

Validation

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Searches

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Cell type

Expression

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Specificity

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Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
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TISSUE ATLAS PRIMARY DATA ENDOMETRIUM

GENE/PROTEIN

Antibody validation


Dictionary

Endometrium

Tissue proteome

Endometrium

ENDOMETRIUM - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:24.6TPM
GTEx:7.0RPKM
FANTOM5:38.9Tags Per Million

ENDOMETRIUM 1 - Annotated protein expression

Annotated protein
expression

Cells in endometrial stroma:Not detected
Glandular cells:Low
 

Antibody staining

Antibody HPA024578

 

Antibody CAB002677

 

Cells in endometrial stroma

Not detected   Not detected  

Glandular cells

Low   Low  
   
   
   

ENDOMETRIUM 2 - Annotated protein expression

Annotated protein
expression

Cells in endometrial stroma:Not detected
Glandular cells:Low
 

Antibody staining

Antibody HPA024578

 

Antibody CAB002677

 

Cells in endometrial stroma

Low   Not detected  

Glandular cells

Not detected   Low  
   
   
   

ENDOMETRIUM - HPA RNA-seq

Average TPM

24.6

overview Female, age 34
Sample 1
TPM: 20.5
Cell types%
Glandular cells: 5
Stromal cells: 25
Smooth muscle cells: 65
Other cell types: 5
overview Female, age 56
Sample 2
TPM: 21.6
Cell types%
Glandular cells: 5
Stromal cells: 15
Smooth muscle cells: 75
Other cell types: 5
overview Female, age 40
Sample 3
TPM: 30.2
Cell types%
Glandular cells: 5
Stromal cells: 20
Smooth muscle cells: 70
Other cell types: 5
overview Female, age 60
Sample 4
TPM: 19.3
Cell types%
Glandular cells: 5
Stromal cells: 20
Smooth muscle cells: 75
Other cell types: 0
overview Female, age 83
Sample 5
TPM: 31.4
Cell types%
Glandular cells: 5
Stromal cells: 10
Smooth muscle cells: 80
Other cell types: 5

ENDOMETRIUM - GTEx RNA-seq

Average RPKM

7.0

GTEx sample id

RPKM

6.17.27.95.58.4012345678
 
6.17.27.95.58.4012345678

Uterus - Endometrium

Uterus - Endometrium
RPKM: 7.0
Samples: 14

Max RPKM: 8.4
Min RPKM: 5.5
Std RPKM: 0.9
Median RPKM: 7.1
GTEX-PX3G-2026-SM-48U1H 8.4
GTEX-R55G-1626-SM-48FF4 8.2
GTEX-U3ZN-0726-SM-4DXT5 8.0
GTEX-ZVT2-0426-SM-5E44S 8.0
GTEX-ZTPG-2026-SM-5O999 7.7
GTEX-PWN1-2026-SM-48TD9 7.4
GTEX-XUZC-0926-SM-4BOQF 7.3
GTEX-S32W-1426-SM-4AD66 7.0
GTEX-T6MO-1526-SM-4DM57 6.7
GTEX-T5JW-1526-SM-4DM5E 6.3
GTEX-11EM3-1926-SM-5987U 6.1
GTEX-Y114-1826-SM-4TT87 5.8
GTEX-13QBU-1626-SM-5LU4S 5.7
GTEX-P78B-2526-SM-3P5ZY 5.5
Show all

ENDOMETRIUM - FANTOM5 CAGE

Average Tags Per Million

38.9

FANTOM5 sample id

Sample description

Tags Per Million

Uterus
Tags Per Million: 38.9
FF:10100-102D1 23-63 years, female 38.9

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