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TISSUE ATLAS PRIMARY DATA CAUDATE

GENE/PROTEIN

Antibody validation


Dictionary

Caudate

CAUDATE - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:62.1RPKM
FANTOM5:281.2Tags Per Million

CAUDATE - Annotated protein expression

Annotated protein
expression

Glial cells:Medium
Neuronal cells:Medium
 

Antibody staining

Antibody HPA006550

 

Glial cells

Medium  

Neuronal cells

Medium  
 
 

CAUDATE - HPA RNA-seq

Pending HPA RNA-seq analysis


CAUDATE - GTEx RNA-seq

Average RPKM

62.1

GTEx sample id

RPKM

 

Brain - Caudate (basal ganglia)

Brain - Caudate (basal ganglia)
RPKM: 62.1
Samples: 117

Max RPKM: 132.5
Min RPKM: 18.5
Std RPKM: 18.8
Median RPKM: 63.5
GTEX-T2IS-0011-R5A-SM-32QP4 132.5
GTEX-P44H-0011-R5A-SM-2XCEX 107.2
GTEX-X585-0011-R5A-SM-46MVI 99.7
GTEX-1399T-0011-R5b-SM-5IJDK 96.4
GTEX-12WSF-0011-R5a-SM-5HL8K 96.2
GTEX-132Q8-0011-R5a-SM-5IJDM 88.6
GTEX-ZUA1-0011-R5b-SM-51MTG 87.1
GTEX-139TT-0011-R5b-SM-5K7W8 85.9
GTEX-12WSC-0011-R5b-SM-5CVNS 85.1
GTEX-12WSA-0011-R5b-SM-5GU5I 85.0
GTEX-S7SE-0011-R5A-SM-2XCDA 84.1
GTEX-T6MN-0011-R5A-SM-32QPD 84.1
GTEX-WVLH-0011-R5A-SM-3MJFW 83.6
GTEX-N7MT-0011-R5a-SM-2I3G6 81.8
GTEX-11H98-0011-R5b-SM-57WCF 81.0
GTEX-QVJO-0011-R5A-SM-2S1QM 79.6
GTEX-12WSM-0011-R5a-SM-5EQ4Y 79.3
GTEX-TSE9-0011-R5A-SM-3DB7J 79.2
GTEX-ZAB4-0011-R5a-SM-4SOKC 79.2
GTEX-13G51-0011-R5a-SM-5L3EB 79.0
GTEX-WWYW-0011-R5A-SM-3NB3E 78.7
GTEX-13N1W-0011-R5b-SM-5MR5Q 78.4
GTEX-14BIM-0011-R5b-SM-5S2RM 77.3
GTEX-13X6K-0011-R5b-SM-5PNUE 77.2
GTEX-13JUV-0011-R5a-SM-5LZY5 76.9
GTEX-11OF3-0011-R5a-SM-57WB4 76.8
GTEX-PVOW-0011-R5A-SM-32PL7 76.6
GTEX-131YS-0011-R5b-SM-5K7YB 76.3
GTEX-UTHO-0011-R5A-SM-3GIJD 76.0
GTEX-12WSB-0011-R5b-SM-5GU67 75.7
GTEX-RVPU-0011-R5A-SM-2XCAD 74.1
GTEX-WZTO-0011-R5B-SM-3NMC5 73.9
GTEX-13FHO-0011-R5b-SM-5LZZ3 73.6
GTEX-11NV4-0011-R5a-SM-5NQ88 73.3
GTEX-12ZZY-0011-R5a-SM-5EGL9 72.9
GTEX-13X6I-0011-R5a-SM-5PNWW 72.4
GTEX-14ABY-0011-R5b-SM-5SI7B 72.1
GTEX-13RTJ-0011-R5a-SM-5P9HR 70.6
GTEX-13X6J-0011-R5b-SM-5PNWT 70.6
GTEX-T5JC-0011-R5A-SM-32PLK 70.6
GTEX-145MH-0011-R5a-SM-5P9JT 70.5
GTEX-OHPN-0011-R5A-SM-2I5FF 70.2
GTEX-N7MS-0011-R5a-SM-2HMK8 69.7
GTEX-1313W-0011-R5b-SM-5L3EP 68.9
GTEX-13VXU-0011-R5a-SM-5O9D7 68.5
GTEX-Z93S-0011-R5b-SM-4RGNI 67.4
GTEX-PWO3-0011-R5A-SM-2I5EZ 67.1
GTEX-XMD1-0011-R5A-SM-4AT47 66.9
GTEX-13O3Q-0011-R5b-SM-5P9H4 66.8
GTEX-R55E-0011-R5A-SM-2TC5N 66.4
GTEX-13FXS-0011-R5b-SM-5LZYE 66.0
GTEX-13SLX-0011-R5a-SM-5O9BV 65.7
GTEX-Y8DK-0011-R5B-SM-4RTW6 65.7
GTEX-13O3O-0011-R5b-SM-5KM44 65.5
GTEX-WHSE-0011-R5A-SM-3P5ZO 65.4
GTEX-WL46-0011-R5A-SM-3LK6V 64.7
GTEX-Q2AG-0011-R5A-SM-2HMJH 64.5
GTEX-13CZV-0011-R5a-SM-5K7XA 64.0
GTEX-11GSP-0011-R5a-SM-57WBE 63.5
GTEX-13FLW-0011-R5a-SM-5LZX6 62.2
GTEX-13NYS-0011-R5a-SM-5MR4D 61.4
GTEX-ZE9C-0011-R5a-SM-5EGLO 61.3
GTEX-13FLV-0011-R5a-SM-5LZWT 60.8
GTEX-NL4W-0011-R5a-SM-2I3GD 60.7
GTEX-ZE7O-0011-R5a-SM-57WBO 60.4
GTEX-145LS-0011-R5a-SM-5SI65 60.3
GTEX-13OW8-0011-R5b-SM-5L3FQ 59.3
GTEX-RU72-0011-R5A-SM-2TF6U 59.0
GTEX-13OVJ-0011-R5a-SM-5P9H7 58.8
GTEX-13SLW-0011-R5b-SM-5SI6Z 58.4
GTEX-144GO-0011-R5a-SM-5PNUR 58.4
GTEX-13OVL-0011-R5b-SM-5L3FU 57.4
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 57.0
GTEX-13NYB-0011-R5a-SM-5MR45 57.0
GTEX-X4XX-0011-R5A-SM-46MWN 56.9
GTEX-NPJ7-0011-R5a-SM-33HBK 56.6
GTEX-13OW7-0011-R5b-SM-5O9DM 55.5
GTEX-13OW6-0011-R5a-SM-5O9BK 55.2
GTEX-13OW5-0011-R5b-SM-5L3FR 55.1
GTEX-13OVH-0011-R5b-SM-5KM4L 53.7
GTEX-NPJ8-0011-R5a-SM-2HMJY 53.2
GTEX-YFC4-0011-R5a-SM-4RGLR 52.3
GTEX-RVPV-0011-R5A-SM-2TF69 52.0
GTEX-NL3H-0011-R5a-SM-2I3GB 51.9
GTEX-12ZZW-0011-R5a-SM-5DUVN 51.7
GTEX-X261-0011-R5A-SM-3NMB4 50.4
GTEX-11WQC-0011-R5a-SM-5BC74 50.2
GTEX-12WSD-0011-R5b-SM-5CVNG 50.0
GTEX-QMR6-0011-R5A-SM-32PKT 49.0
GTEX-ZF28-0011-R5a-SM-4WWCZ 48.3
GTEX-ZXG5-0011-R5b-SM-57WBN 47.8
GTEX-12ZZX-0011-R5a-SM-5HL89 47.3
GTEX-13JVG-0011-R5a-SM-5MR4O 46.1
GTEX-13S7M-0011-R5b-SM-5P9HS 46.0
GTEX-13CIG-0011-R5b-SM-5L3F2 45.9
GTEX-XOTO-0011-R5A-SM-4B657 45.9
GTEX-14BIN-0011-R5b-SM-5SI78 45.6
GTEX-OXRN-0011-R5A-SM-2I5EF 44.7
GTEX-139T8-0011-R5b-SM-5J1MO 43.4
GTEX-ZV68-0011-R5a-SM-4YCDW 40.6
GTEX-13PVQ-0011-R5b-SM-5O9DI 40.2
GTEX-ZVZQ-0011-R5b-SM-57WDC 39.9
GTEX-13PLJ-0011-R5a-SM-5O9BG 39.3
GTEX-ZVT3-0011-R5a-SM-51MSI 38.2
GTEX-139TS-0011-R5b-SM-5J2MZ 37.6
GTEX-1445S-0011-R5a-SM-5PNUS 36.4
GTEX-YJ89-0011-R5a-SM-4V6GM 35.7
GTEX-1477Z-0011-R5b-SM-5PNUO 34.5
GTEX-144GL-0011-R5b-SM-5PNUJ 31.4
GTEX-13112-0011-R5b-SM-5DUV8 30.6
GTEX-S7PM-0011-R5A-SM-3NM8G 30.4
GTEX-12WSH-0011-R5b-SM-5P9F3 29.3
GTEX-13FHP-0011-R5b-SM-5LZY2 28.9
GTEX-11UD1-0011-R5b-SM-5P9FP 28.6
GTEX-13CF2-0011-R5a-SM-5LZWS 25.6
GTEX-13NZA-0011-R5b-SM-5KM4K 20.1
GTEX-145MG-0011-R5b-SM-5S2VU 18.5
Show all

CAUDATE - FANTOM5 CAGE

Average Tags Per Million

281.2

FANTOM5 sample id

Sample description

Tags Per Million

Caudate nucleus
Tags Per Million: 281.2
FF:10379-105H1 89 years, female 333.1
FF:10164-103B2 76 years, female 229.4

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