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TISSUE ATLAS PRIMARY DATA CEREBRAL CORTEX

GENE/PROTEIN

Antibody validation


Dictionary

Cerebral cortex

Tissue proteome

Brain
Extended brain samples

CEREBRAL CORTEX - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:223.9TPM
GTEx:54.6RPKM

CEREBRAL CORTEX - Annotated protein expression

Annotated protein
expression

Endothelial cells:Low
Glial cells:Low
Neuronal cells:High
Neuropil:Not detected
 

Antibody staining

Antibody HPA006550

 

Endothelial cells

Low  

Glial cells

Low  

Neuronal cells

High  

Neuropil

Not detected  
 
 
 

CEREBRAL CORTEX - HPA RNA-seq

Average TPM

223.9

N/A Male, age 5
Sample 1
TPM: 244.5
overview Female, age 40
Sample 2
TPM: 173.0
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65
overview Male, age 70
Sample 3
TPM: 254.4
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM

54.6

GTEx sample id

RPKM

 

Brain - Cortex

Brain - Cortex
RPKM: 52.0
Samples: 114

Max RPKM: 70.7
Min RPKM: 26.9
Std RPKM: 8.1
Median RPKM: 51.6
GTEX-X585-3026-SM-46MWF 70.7
GTEX-T2IS-3026-SM-32QPM 67.8
GTEX-WZTO-2926-SM-3NM9I 67.3
GTEX-13FHO-3026-SM-5J1O9 66.6
GTEX-WVLH-3026-SM-3MJG9 65.2
GTEX-TSE9-3026-SM-3DB76 65.1
GTEX-X4XX-3026-SM-3NMB2 64.4
GTEX-145MG-3026-SM-5RQJA 63.7
GTEX-QVJO-1426-SM-2S1QY 63.5
GTEX-144FL-3026-SM-5O99C 63.1
GTEX-ZAK1-3026-SM-5S2MJ 63.1
GTEX-131YS-3126-SM-5KLYT 62.7
GTEX-11DXY-3226-SM-5GIDE 62.3
GTEX-132Q8-3026-SM-5PNVG 62.2
GTEX-13SLX-3126-SM-5S2Q5 61.5
GTEX-145MH-3026-SM-5Q5DZ 61.4
GTEX-PVOW-2526-SM-2XCF7 61.4
GTEX-14BMV-3026-SM-5S2PQ 60.9
GTEX-Y8DK-0826-SM-4TT3T 60.9
GTEX-117XS-3026-SM-5N9CA 59.6
GTEX-13FLW-1426-SM-5K7YE 59.5
GTEX-13PL6-3126-SM-5LUAR 59.1
GTEX-11OC5-0726-SM-5P9JK 58.9
GTEX-12ZZZ-3026-SM-5BC67 58.9
GTEX-1192X-3126-SM-5N9BY 58.8
GTEX-13NYC-2826-SM-5K7WR 58.5
GTEX-QVUS-2826-SM-3GADB 58.1
GTEX-13OVJ-2826-SM-5L3GW 58.0
GTEX-11WQK-3026-SM-5EQL6 57.6
GTEX-ZVT3-3026-SM-5E43N 57.6
GTEX-T5JC-2426-SM-3NMDB 56.9
GTEX-13QIC-2926-SM-5J2NF 56.7
GTEX-145LS-3126-SM-5Q5BY 56.6
GTEX-13NYB-3026-SM-5IJD7 56.4
GTEX-11GSO-2926-SM-5HL73 56.2
GTEX-QDT8-2926-SM-32PKC 56.1
GTEX-WL46-2926-SM-3LK82 55.9
GTEX-1399T-3026-SM-5KLZC 55.6
GTEX-WHSE-3026-SM-3P5ZH 55.6
GTEX-XLM4-3026-SM-4AT6L 55.6
GTEX-14ASI-3026-SM-5S2PN 55.3
GTEX-12WSC-3026-SM-5GCNF 55.0
GTEX-UTHO-3026-SM-3GAFB 54.7
GTEX-12ZZX-2926-SM-5GCOQ 54.6
GTEX-13VXU-2926-SM-5LU5C 54.3
GTEX-13O3O-3126-SM-5KM3H 54.1
GTEX-12ZZY-3026-SM-5GCOU 53.7
GTEX-RNOR-2326-SM-2TF4I 53.7
GTEX-14A5I-2926-SM-5Q5CQ 53.6
GTEX-OXRN-2426-SM-2I5EQ 53.5
GTEX-YFC4-3126-SM-5PNV6 53.2
GTEX-T6MN-2626-SM-32PMQ 53.0
GTEX-ZUA1-3026-SM-59HJC 53.0
GTEX-ZYFD-3026-SM-5E44C 52.6
GTEX-11NUK-2926-SM-5A5MD 52.5
GTEX-13X6K-2926-SM-5Q5D5 52.3
GTEX-WWYW-3126-SM-3NB39 51.8
GTEX-YJ89-3026-SM-5IFJI 51.4
GTEX-13O3Q-2926-SM-5KM45 51.3
GTEX-13OW8-2826-SM-5L3GC 51.1
GTEX-13JVG-3126-SM-5L3FH 50.8
GTEX-13OVH-3026-SM-5MR4N 50.6
GTEX-XOTO-3026-SM-4B65M 50.4
GTEX-12ZZW-2926-SM-5LZUP 50.3
GTEX-NPJ7-2726-SM-2I3FT 50.3
GTEX-ZE7O-3126-SM-5HL5X 50.3
GTEX-139T8-1026-SM-5J2MC 50.2
GTEX-11O72-2926-SM-5BC4V 50.1
GTEX-13X6J-3026-SM-5Q5CU 50.1
GTEX-111FC-3126-SM-5GZZ2 50.0
GTEX-144GL-3026-SM-5Q5CW 49.9
GTEX-11ZUS-2926-SM-5FQSL 49.6
GTEX-RU72-3026-SM-5SI7Y 49.6
GTEX-Z93S-2926-SM-57WB9 49.5
GTEX-12WSH-3026-SM-5CVNI 49.4
GTEX-1313W-3126-SM-5LZUI 49.4
GTEX-11PRG-2926-SM-5987A 49.0
GTEX-N7MT-1126-SM-5SI7V 49.0
GTEX-1128S-2726-SM-5H12C 48.9
GTEX-NPJ8-1526-SM-2D7VU 48.9
GTEX-12126-1026-SM-5P9JJ 48.7
GTEX-11EI6-3026-SM-5GZZO 48.5
GTEX-ZZPT-3026-SM-5GZXH 48.4
GTEX-11ONC-2926-SM-5P9JM 48.3
GTEX-13NYS-3126-SM-5KLYV 48.2
GTEX-11TTK-2926-SM-5PNYP 47.8
GTEX-R55F-1326-SM-5S2V4 47.4
GTEX-13OW6-3026-SM-5J2MI 46.9
GTEX-Y111-2726-SM-4TT3N 46.8
GTEX-13PVQ-3026-SM-5SI93 46.7
GTEX-13FHP-3026-SM-5IJBS 46.4
GTEX-13FXS-3126-SM-5J2NN 46.1
GTEX-ZAJG-3126-SM-5HL9J 45.8
GTEX-11DXW-1126-SM-5H12Q 45.7
GTEX-PWO3-0926-SM-2I5EY 45.4
GTEX-13JUV-2926-SM-5LZX7 45.3
GTEX-11EMC-3226-SM-5EGKW 45.1
GTEX-13S7M-3126-SM-5RQJQ 44.5
GTEX-11GS4-3126-SM-5A5LH 43.8
GTEX-QMR6-1426-SM-32PLA 43.3
GTEX-Q2AG-2926-SM-2HMJ3 43.0
GTEX-145MF-2726-SM-5O995 42.1
GTEX-131XW-3126-SM-5LZUC 41.8
GTEX-13G51-3026-SM-5IJB8 40.0
GTEX-1117F-3226-SM-5N9CT 39.9
GTEX-1445S-3026-SM-5O9BR 39.8
GTEX-13OW7-3026-SM-5L3GY 38.9
GTEX-12WSA-2926-SM-5EQ4D 38.6
GTEX-12WSD-3126-SM-5HL7P 38.1
GTEX-11GSP-3226-SM-5986O 37.3
GTEX-11NV4-2126-SM-5N9DS 34.7
GTEX-13IVO-2926-SM-5L3CZ 33.6
GTEX-147GR-3026-SM-5S2ML 27.9
GTEX-11OF3-2926-SM-5HL78 26.9
Show all
 

Brain - Frontal Cortex (BA9)

Brain - Frontal Cortex (BA9)
RPKM: 57.3
Samples: 108

Max RPKM: 104.1
Min RPKM: 25.1
Std RPKM: 12.3
Median RPKM: 57.5
GTEX-12ZZY-0011-R10b-SM-5HL7W 104.1
GTEX-X4EP-0011-R10B-SM-4QASJ 88.7
GTEX-P44H-0011-R10A-SM-2XCEK 81.5
GTEX-13N2G-0011-R10a-SM-5MR34 80.5
GTEX-QVUS-0011-R10A-SM-3GIK3 77.4
GTEX-13O3O-0011-R10a-SM-5LUA9 76.0
GTEX-12WSC-0011-R10a-SM-5GU57 75.2
GTEX-12WSD-0011-R10b-SM-5GU79 74.2
GTEX-13QJC-0011-R10a-SM-5SI63 73.2
GTEX-13SLX-0011-R10a-SM-5P9HV 72.3
GTEX-YFC4-0011-R10a-SM-4SOK5 70.4
GTEX-13RTJ-0011-R10b-SM-5O9CW 70.1
GTEX-T6MN-0011-R10A-SM-32QP7 69.5
GTEX-WWYW-0011-R10A-SM-3NB35 68.7
GTEX-X585-0011-R10A-SM-46MUY 68.7
GTEX-14ASI-0011-R10b-SM-5S2VZ 67.7
GTEX-T5JC-0011-R10A-SM-32PM2 67.7
GTEX-S7SE-0011-R10A-SM-2XCDF 67.4
GTEX-145MG-0011-R10a-SM-5PNWG 67.3
GTEX-X4XX-0011-R10B-SM-46MWO 66.2
GTEX-WL46-0011-R10A-SM-3MJFQ 65.9
GTEX-TSE9-0011-R10A-SM-3DB7O 65.8
GTEX-11H98-0011-R10b-SM-5NQ98 65.6
GTEX-13QIC-0011-R10a-SM-5O9C7 65.6
GTEX-WVLH-0011-R10A-SM-3MJFM 64.8
GTEX-ZVZQ-0011-R10b-SM-51MRT 64.6
GTEX-11WQK-0011-R10a-SM-5BC6R 64.5
GTEX-13NYS-0011-R10a-SM-5MR4S 64.2
GTEX-13N1W-0011-R10b-SM-5MR4H 64.0
GTEX-Y8DK-0011-R10A-SM-4SOK1 63.8
GTEX-12WSF-0011-R10a-SM-5LZVH 63.4
GTEX-NPJ7-0011-R10A-SM-2I3E5 63.4
GTEX-YJ89-0011-R10a-SM-4SOK9 62.8
GTEX-13S7M-0011-R10b-SM-5PNZB 62.7
GTEX-14BIN-0011-R10a-SM-5S2UA 62.2
GTEX-13X6I-0011-R10a-SM-5PNWI 61.6
GTEX-13OW7-0011-R10a-SM-5L3H3 61.4
GTEX-11ZUS-0011-R10b-SM-5BC79 61.3
GTEX-13OVJ-0011-R10b-SM-5L3HT 61.1
GTEX-14BIL-0011-R10a-SM-5SI75 61.1
GTEX-Z93S-0011-R10a-SM-4RGNM 61.0
GTEX-ZAB4-0011-R10a-SM-4SOKH 60.8
GTEX-13O3Q-0011-R10b-SM-5KM39 60.3
GTEX-1313W-0011-R10b-SM-5DUXA 59.6
GTEX-13NYB-0011-R10a-SM-5KM43 59.6
GTEX-12WSH-0011-R10a-SM-5LZUS 59.2
GTEX-13X6J-0011-R10b-SM-5PNWA 59.1
GTEX-QDT8-0011-R10A-SM-32PKG 58.7
GTEX-145MH-0011-R10b-SM-5PNUK 58.3
GTEX-12ZZX-0011-R10b-SM-5DUWK 58.2
GTEX-131YS-0011-R10b-SM-5EQ5N 57.9
GTEX-132Q8-0011-R10b-SM-5DUWZ 57.8
GTEX-12ZZZ-0011-R10a-SM-5P9HC 57.7
GTEX-13CZV-0011-R10b-SM-5LZYD 57.5
GTEX-13FLW-0011-R10b-SM-5LZZF 57.4
GTEX-WZTO-0011-R10B-SM-4E3KB 57.0
GTEX-13FXS-0011-R10a-SM-5J2MA 56.9
GTEX-ZDXO-0011-R10a-SM-4WWD8 56.8
GTEX-XLM4-0011-R10A-SM-4AT5P 56.3
GTEX-139TS-0011-R10a-SM-5K7TU 56.1
GTEX-13SLW-0011-R10a-SM-5S2UI 56.0
GTEX-RVPU-0011-R10A-SM-2XCAH 55.7
GTEX-13FHO-0011-R10b-SM-5J2MM 55.6
GTEX-NPJ8-0011-R10A-SM-2YUMO 55.6
GTEX-XMD1-0011-R10A-SM-4AT4A 55.3
GTEX-ZUA1-0011-R10a-SM-51MT6 54.8
GTEX-N7MT-0011-R10A-SM-2I3E1 54.7
GTEX-NL4W-0011-R10A-SM-2I3DY 54.7
GTEX-ZVT3-0011-R10b-SM-57WB6 54.7
GTEX-13X6K-0011-R10a-SM-5P9JR 54.3
GTEX-12126-0011-R10b-SM-5BC6T 53.8
GTEX-QVJO-0011-R10A-SM-2S1QJ 53.7
GTEX-12WSM-0011-R10a-SM-5DUWV 53.0
GTEX-N7MS-0011-R10A-SM-2HMJK 52.9
GTEX-OXRN-0011-R10A-SM-2I5GC 52.8
GTEX-X261-0011-R10B-SM-4E3JT 52.8
GTEX-147GR-0011-R10b-SM-5S2UM 52.6
GTEX-NL3H-0011-R10A-SM-2I3E9 52.4
GTEX-131XH-0011-R10a-SM-5EGLJ 51.4
GTEX-145LU-0011-R10a-SM-5PNWJ 51.3
GTEX-145LS-0011-R10a-SM-5PNUQ 51.1
GTEX-13FLV-0011-R10b-SM-5LZZ2 50.7
GTEX-13FTZ-0011-R10b-SM-5KLZS 50.6
GTEX-13JUV-0011-R10b-SM-5LZXR 50.4
GTEX-12WSE-0011-R10b-SM-5P9JV 50.3
GTEX-QMR6-0011-R10A-SM-32PKO 50.3
GTEX-13OVL-0011-R10a-SM-5L3GS 49.8
GTEX-13OW6-0011-R10a-SM-5L3HE 48.3
GTEX-147F4-0011-R10b-SM-5S2WC 48.3
GTEX-1445S-0011-R10a-SM-5PNWB 47.9
GTEX-12WSA-0011-R10b-SM-5P9ET 47.3
GTEX-13OW8-0011-R10a-SM-5L3H6 47.1
GTEX-13G51-0011-R10b-SM-5LZYF 46.8
GTEX-Q2AG-0011-R10A-SM-2HMLA 46.3
GTEX-ZF28-0011-R10a-SM-4WWEH 45.6
GTEX-11WQC-0011-R10a-SM-57WCT 45.4
GTEX-12ZZW-0011-R10b-SM-5HL9X 43.5
GTEX-11GSP-0011-R10a-SM-5NQ7J 41.5
GTEX-13NZA-0011-R10b-SM-5KM54 40.7
GTEX-ZE7O-0011-R10a-SM-57WAZ 38.3
GTEX-13JVG-0011-R10b-SM-5KM2P 35.3
GTEX-OXRO-0011-R10A-SM-2I5EH 35.3
GTEX-ZXG5-0011-R10a-SM-57WDD 34.5
GTEX-1477Z-0011-R10b-SM-5S2RF 31.8
GTEX-14753-0011-R10b-SM-5S2WE 30.8
GTEX-ZV68-0011-R10a-SM-51MT7 28.6
GTEX-131XW-0011-R10a-SM-5DUVA 27.4
GTEX-13IVO-0011-R10a-SM-5LZY3 25.1
Show all

CEREBRAL CORTEX - FANTOM5 CAGE

No Fantom CAGE analysis found for this gene / tissue

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