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ABCC5

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:18.1TPM
GTEx:8.8RPKM
FANTOM5:10.4Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Low
Peripheral nerve/ganglion:Not detected
 

Antibody staining

Antibody HPA052295

  

Endothelial cells

 Not detected  

Glandular cells

 Low  

Peripheral nerve/ganglion

 Not detected  
 
 
 

COLON - HPA RNA-seq

Average TPM

18.1
overview Male, age 54
Sample 1
TPM: 14.3
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
TPM: 14.8
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
TPM: 15.3
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
TPM: 12.3
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
TPM: 11.2
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
TPM: 12.3
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
TPM: 22.2
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78
Sample 8
TPM: 42.5
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84
Sample 9
TPM: 18.6
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80
Sample 10
TPM: 10.5
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78
Sample 11
TPM: 18.8
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69
Sample 12
TPM: 14.7
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72
Sample 13
TPM: 28.4
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

8.8

GTEx sample id

RPKM
 

Colon - Sigmoid
Colon - Sigmoid
RPKM: 7.7
Samples: 149

Max RPKM: 15.7
Min RPKM: 1.8
Std RPKM: 2.9
Median RPKM: 7.3
GTEX-147GR-2826-SM-5RQK8 15.7
GTEX-V955-1726-SM-4JBHF 14.8
GTEX-145LS-2926-SM-5O99G 14.7
GTEX-13N2G-2226-SM-5IJCU 14.3
GTEX-ZYY3-2226-SM-5E45A 13.4
GTEX-132AR-2826-SM-5IJFV 13.3
GTEX-14A5I-2426-SM-5Q5CP 12.6
GTEX-ZAJG-2626-SM-5S2NU 12.5
Show all
 

Colon - Transverse
Colon - Transverse
RPKM: 9.6
Samples: 196

Max RPKM: 28.5
Min RPKM: 0.8
Std RPKM: 3.8
Median RPKM: 8.9
GTEX-ZLV1-1226-SM-4WWBX 28.5
GTEX-14E6E-1526-SM-5RQIG 22.5
GTEX-1122O-1526-SM-5N9CL 21.4
GTEX-ZVT2-1926-SM-5GU5T 19.8
GTEX-1399S-1926-SM-5J2M5 17.9
GTEX-R55D-1826-SM-48FEF 17.7
GTEX-PWCY-1026-SM-48TD4 17.6
GTEX-XQ8I-2126-SM-4BOOM 17.4
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

10.4

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 10.4
FF:10014-101C5 62,83,84 years, mixed 10.4

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.