Tissue expression of SF3B6 - Staining in esophagus

ESOPHAGUS - Expression summary

Protein expression

RNA expression

HPA:	102.9	TPM
GTEx:	67.7	RPKM
FANTOM5:	159.2	Tags Per Million

ESOPHAGUS - Annotated protein expression

Annotated protein
expression

Squamous epithelial cells:

High

Antibody staining	Antibody HPA034829	Antibody HPA034830
Squamous epithelial cells	Medium	High

ESOPHAGUS - HPA RNA-seq

Average TPM	102.9

Female, age 70

Sample 1
TPM: 101.9

Cell types%

Squamous epithelial cells: 35
Smooth muscle cells: 15
Skeletal muscle cells: 5
Other cell types: 45

Male, age 38

Sample 2
TPM: 106.3

Cell types%

Squamous epithelial cells: 60
Smooth muscle cells: 20
Other cell types: 20

Male, age 76

Sample 3
TPM: 100.3

Cell types%

Squamous epithelial cells: 45
Smooth muscle cells: 15
Other cell types: 40

ESOPHAGUS - GTEx RNA-seq

Average RPKM	67.7

GTEx sample id

RPKM

Esophagus - Mucosa

Esophagus - Mucosa
RPKM: 67.7

Samples: 286

Max RPKM: 115.5
Min RPKM: 38.8
Std RPKM: 12.2
Median RPKM: 65.2

GTEX-14C38-2126-SM-5RQJO

115.5

GTEX-13O3Q-0826-SM-5IFGF

105.7

GTEX-13O1R-1326-SM-5IJF5

100.0

GTEX-13OVJ-1226-SM-5L3HA

99.5

GTEX-NPJ8-1926-SM-3MJGB

98.8

GTEX-11DYG-1326-SM-5N9DO

96.4

GTEX-14BMU-0926-SM-5S2QB

96.3

GTEX-ZTX8-0226-SM-5E44D

95.5

Show all

ESOPHAGUS - FANTOM5 CAGE

Average Tags Per Million	159.2

FANTOM5 sample id

Sample description

Tags Per Million

Esophagus
Tags Per Million: 159.2

FF:10015-101C6

68,74,75 years, mixed

159.2