Tissue expression of FANCL - Staining in adipose tissue

SOFT TISSUE - Expression summary

Protein expression

RNA expression

HPA:	10.0	TPM
GTEx:	4.5	RPKM
FANTOM5:	14.2	Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:	Not detected
Fibroblasts:	Low
Chondrocytes:	Not detected

Antibody staining	Antibody HPA036685	Antibody HPA036686	Antibody CAB033842
Adipocytes	Not detected	High	Not detected
Fibroblasts	Low	High	Low
Chondrocytes	Not detected

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:	Low
Chondrocytes:	Low
Fibroblasts:	Medium
Peripheral nerve:	Medium

Antibody staining	Antibody HPA036685	Antibody HPA036686	Antibody CAB033842
Adipocytes	Not detected	High	Low
Chondrocytes	Low	Medium	Low
Fibroblasts	Low	High	Medium
Peripheral nerve	Not detected	Medium	Medium

ADIPOSE TISSUE - HPA RNA-seq

Average TPM	10.0

Female, age 80

Sample 1
TPM: 10.0

Cell types%

Adipocytes: 95
Other cell types: 5

Female, age 45

Sample 2
TPM: 8.3

Female, age 57

Sample 3
TPM: 9.7

Cell types%

Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5

Female, age 74

Sample 4
TPM: 13.5

Cell types%

Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5

Female, age 59

Sample 5
TPM: 8.4

Cell types%

Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM	4.5

GTEx sample id

RPKM

Adipose - Subcutaneous

Adipose - Subcutaneous
RPKM: 4.5

Samples: 350

Max RPKM: 8.9
Min RPKM: 1.8
Std RPKM: 1.2
Median RPKM: 4.4

GTEX-P44H-0326-SM-2XCES

8.9

GTEX-SN8G-0226-SM-4DM6B

8.5

GTEX-QDT8-0226-SM-32PL4

8.2

GTEX-12WSB-0226-SM-5GCOR

8.0

GTEX-ZEX8-2326-SM-5S2MN

7.8

GTEX-Z93T-0226-SM-5HL5Z

7.6

GTEX-WVJS-0226-SM-4MVOU

7.4

GTEX-X638-0226-SM-47JZ9

7.3

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Adipose - Visceral (Omentum)

Adipose - Visceral (Omentum)
RPKM: 4.4

Samples: 227

Max RPKM: 15.5
Min RPKM: 1.2
Std RPKM: 1.9
Median RPKM: 3.9

GTEX-13PDP-1226-SM-5K7TW

15.5

GTEX-14A6H-1026-SM-5SIAZ

10.3

GTEX-13IVO-2426-SM-5K7V9

10.0

GTEX-WYVS-0626-SM-4SOJY

8.6

GTEX-11DXY-0326-SM-5H12F

8.3

GTEX-13PL6-0926-SM-5KLYY

8.2

GTEX-11ZTS-1326-SM-5EQMA

8.1

GTEX-13NYS-0726-SM-5J1OR

8.1

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ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million	14.2

FANTOM5 sample id

Sample description

Tags Per Million

Adipose tissue
Tags Per Million: 14.2

FF:10010-101C1

65,65,76 years, mixed

14.2