Tissue expression of SDC1 - Staining in small intestine

SMALL INTESTINE - Expression summary

Protein expression

RNA expression

HPA:	60.3	TPM
GTEx:	37.2	RPKM
FANTOM5:	142.7	Tags Per Million

SMALL INTESTINE - Annotated protein expression

Annotated protein
expression

Glandular cells:

High

Antibody staining	Antibody HPA006185	Antibody CAB002424
Glandular cells	High	Not detected

SMALL INTESTINE - HPA RNA-seq

Average TPM	60.3

Male, age 65

Sample 1
TPM: 68.1

Cell types%

Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40

Male, age 39

Sample 2
TPM: 58.2

Cell types%

Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55

Male, age 68

Sample 3
TPM: 63.9

Cell types%

Glandular cells: 30
Smooth muscle cells: 15
Other cell types: 55

Male, age 85

Sample 4
TPM: 51.1

SMALL INTESTINE - GTEx RNA-seq

Average RPKM	37.2

GTEx sample id

RPKM

Small Intestine - Terminal Ileum

Small Intestine - Terminal Ileum
RPKM: 37.2

Samples: 88

Max RPKM: 93.1
Min RPKM: 0.5
Std RPKM: 24.2
Median RPKM: 31.8

GTEX-111YS-1426-SM-5GID8

93.1

GTEX-YEC4-1726-SM-4W21E

88.9

GTEX-131XF-1326-SM-5GCMQ

83.3

GTEX-ZTSS-0926-SM-59865

79.8

GTEX-13D11-0726-SM-5LZZB

79.2

GTEX-XUZC-1426-SM-4BRV3

77.2

GTEX-ZPCL-1726-SM-57WEO

77.0

GTEX-13113-1226-SM-5EGHT

72.3

Show all

SMALL INTESTINE - FANTOM5 CAGE

Average Tags Per Million	142.7

FANTOM5 sample id

Sample description

Tags Per Million

Small intestine
Tags Per Million: 142.7

FF:10024-101D6

15,40,85 years, mixed

142.7