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TISSUE ATLAS PRIMARY DATA HIPPOCAMPUS
MOUSE BRAIN

GENE/PROTEIN

Antibody validation


Dictionary

Hippocampus

HIPPOCAMPUS - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:21.3RPKM
FANTOM5:45.2Tags Per Million

HIPPOCAMPUS - Annotated protein expression

Annotated protein
expression

Glial cells:Not detected
Neuronal cells:Not detected
 

Antibody staining

Antibody HPA027137

 

Antibody HPA045760

 

Antibody HPA050590

 

Glial cells

Not detected   Not detected   Not detected  

Neuronal cells

Medium   Not detected   Low  
     
     
     

HIPPOCAMPUS - HPA RNA-seq

Pending HPA RNA-seq analysis


HIPPOCAMPUS - GTEx RNA-seq

Average RPKM

21.3

GTEx sample id

RPKM

 

Brain - Hippocampus

Brain - Hippocampus
RPKM: 21.3
Samples: 94

Max RPKM: 45.8
Min RPKM: 5.1
Std RPKM: 10.4
Median RPKM: 19.9
GTEX-T5JC-0011-R1A-SM-32PM6 45.8
GTEX-WVLH-0011-R1A-SM-4MVOK 44.8
GTEX-144GL-0011-R1a-SM-5PNZ5 41.8
GTEX-13FXS-0011-R1a-SM-5K7U6 41.2
GTEX-P44H-0011-R1A-SM-3NM8J 40.6
GTEX-12WSE-0011-R1b-SM-5GU4V 39.9
GTEX-13FLW-0011-R1b-SM-5LZX2 37.8
GTEX-145MH-0011-R1b-SM-5PNWY 37.7
GTEX-Q2AG-0011-R1A-SM-2HMJI 37.1
GTEX-WHSE-0011-R1A-SM-3P5ZK 36.1
GTEX-YFC4-0011-R1a-SM-4V6EH 35.4
GTEX-WL46-0011-R1A-SM-3LK6M 35.2
GTEX-131XH-0011-R1a-SM-5DUWA 34.9
GTEX-X585-0011-R1B-SM-46MVE 34.8
GTEX-RNOR-0011-R1A-SM-5SI8F 34.5
GTEX-R55E-0011-R1A-SM-2TC6N 32.7
GTEX-1313W-0011-R1b-SM-5EQ4A 32.4
GTEX-13JUV-0011-R1a-SM-5LZY4 31.3
GTEX-132Q8-0011-R1a-SM-5EGLK 31.2
GTEX-QDT8-0011-R1A-SM-32PKS 31.0
GTEX-13OW6-0011-R1a-SM-5L3HQ 31.0
GTEX-13O3Q-0011-R1b-SM-5KM3L 30.5
GTEX-13N2G-0011-R1b-SM-5MR3G 29.8
GTEX-WWYW-0011-R1A-SM-3TW8G 29.4
GTEX-XOTO-0011-R1B-SM-4B65C 29.2
GTEX-WZTO-0011-R1B-SM-3NMAR 27.5
GTEX-PVOW-0011-R1A-SM-32PL6 27.4
GTEX-T6MN-0011-R1A-SM-32QOY 26.5
GTEX-N7MS-0011-R1a-SM-2HMJG 26.1
GTEX-131YS-0011-R1a-SM-5DUXC 25.9
GTEX-139TT-0011-R1a-SM-5LZVD 25.8
GTEX-14ASI-0011-R1b-SM-5S2TY 25.3
GTEX-S7SE-0011-R1A-SM-2XCDE 24.6
GTEX-QVJO-0011-R1A-SM-2S1QI 24.4
GTEX-13OW7-0011-R1b-SM-5L3HF 24.4
GTEX-13X6I-0011-R1b-SM-5PNZC 23.6
GTEX-X4XX-0011-R1B-SM-3P622 23.2
GTEX-13N1W-0011-R1b-SM-5MR4T 23.2
GTEX-12WSF-0011-R1a-SM-5DUVI 23.1
GTEX-Y8DK-0011-R1A-SM-4RGLO 22.9
GTEX-TSE9-0011-R1A-SM-3DB7E 22.9
GTEX-13NYB-0011-R1b-SM-5KM4F 22.8
GTEX-ZAB4-0011-R1a-SM-4RGNO 21.7
GTEX-13O3O-0011-R1b-SM-5KM2K 21.1
GTEX-13PDP-0011-R1a-SM-5PNX5 20.7
GTEX-12WSD-0011-R1b-SM-5LZVY 20.5
GTEX-ZUA1-0011-R1a-SM-4YCE2 20.3
GTEX-12WSM-0011-R1a-SM-5LZW6 19.6
GTEX-12ZZX-0011-R1a-SM-5EQ6B 19.3
GTEX-1399T-0011-R1b-SM-5DUWN 19.2
GTEX-13112-0011-R1b-SM-5HL7K 19.1
GTEX-13SLW-0011-R1a-SM-5S2W7 19.0
GTEX-NPJ7-0011-R1a-SM-3GACT 18.9
GTEX-12WSH-0011-R1a-SM-5GU5V 18.5
GTEX-13FHO-0011-R1b-SM-5KLZG 18.2
GTEX-11ONC-0011-R1a-SM-57WD4 18.0
GTEX-N7MT-0011-R1a-SM-5SI7S 17.4
GTEX-13S7M-0011-R1b-SM-5PNZE 15.9
GTEX-QMR6-0011-R1A-SM-32PKW 15.7
GTEX-13RTL-0011-R1a-SM-5PNZ8 15.7
GTEX-13G51-0011-R1a-SM-5LZYR 15.4
GTEX-13NYS-0011-R1b-SM-5MR55 15.1
GTEX-13OW5-0011-R1b-SM-5L3GE 14.7
GTEX-QVUS-0011-R1A-SM-3GAD2 14.4
GTEX-139T8-0011-R1a-SM-5HL75 14.3
GTEX-NL3H-0011-R1a-SM-48TDJ 14.2
GTEX-13FTY-0011-R1a-SM-5LZXE 14.0
GTEX-145LS-0011-R1b-SM-5PNUP 13.6
GTEX-145LU-0011-R1a-SM-5Q5CE 13.4
GTEX-ZF28-0011-R1a-SM-4WWD1 12.6
GTEX-144GO-0011-R1a-SM-5PNWO 12.0
GTEX-13FHP-0011-R1b-SM-5K7XL 11.7
GTEX-13OVJ-0011-R1b-SM-5L3I6 11.4
GTEX-11GSO-0011-R1b-SM-57WD3 11.2
GTEX-ZVZQ-0011-R1a-SM-57WBU 10.5
GTEX-YJ89-0011-R1a-SM-4RGLS 10.4
GTEX-13RTJ-0011-R1a-SM-5O9D9 10.4
GTEX-13QIC-0011-R1a-SM-5O9CJ 10.2
GTEX-11UD1-0011-R1b-SM-5BC7D 9.9
GTEX-13QJC-0011-R1b-SM-5S2UU 9.9
GTEX-XMD1-0011-R1A-SM-4AT4C 9.8
GTEX-PWO3-0011-R1A-SM-2I5EW 9.7
GTEX-UTHO-0011-R1A-SM-3GIJO 9.3
GTEX-13OW8-0011-R1a-SM-5L3HI 9.1
GTEX-13CF2-0011-R1a-SM-5LZY1 8.7
GTEX-13OVL-0011-R1a-SM-5L3H5 8.5
GTEX-ZE7O-0011-R1a-SM-57WDM 8.4
GTEX-13JVG-0011-R1a-SM-5KM32 8.0
GTEX-1212Z-0011-R1b-SM-5BC72 7.2
GTEX-12WSB-0011-R1b-SM-5P9EY 6.8
GTEX-11ZTS-0011-R1a-SM-5BC71 6.6
GTEX-NPJ8-0011-R1a-SM-33HCB 6.3
GTEX-11ZVC-0011-R1b-SM-5BC6M 5.3
GTEX-13NZA-0011-R1b-SM-5LUAF 5.1
Show all

HIPPOCAMPUS - FANTOM5 CAGE

Average Tags Per Million

45.2

FANTOM5 sample id

Sample description

Tags Per Million

Hippocampus
Tags Per Million: 45.2
FF:10169-103B7 60 years, female 54.8
FF:10153-102I9 76 years, female 49.5
FF:10374-105G5 89 years, female 31.3

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