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TISSUE ATLAS PRIMARY DATA KIDNEY
MOUSE BRAIN

GENE/PROTEIN

Antibody validation


Dictionary

Kidney

Tissue proteome

Kidney

KIDNEY - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:10.7TPM
GTEx:11.7RPKM
FANTOM5:16.3Tags Per Million

KIDNEY - Annotated protein expression

Annotated protein
expression

Cells in glomeruli:Low
Cells in tubules:Low
 

Antibody staining

Antibody HPA027137

 

Antibody HPA045760

 

Antibody HPA050590

 

Cells in glomeruli

Not detected   Low   Not detected  

Cells in tubules

Low   Medium   Low  
     
     
     

KIDNEY - HPA RNA-seq

Average TPM

10.7

overview Female, age 58
Sample 1
TPM: 15.7
Cell types%
Cells in tubules: 60
Cells in glomeruli: 20
Fibroblasts: 5
Other cell types: 15
overview Female, age 67
Sample 2
TPM: 11.1
Cell types%
Cells in tubules: 70
Cells in glomeruli: 15
Fibroblasts: 10
Other cell types: 5
overview Female, age 55
Sample 3
TPM: 23.1
Cell types%
Cells in tubules: 80
Cells in glomeruli: 10
Fibroblasts: 5
Other cell types: 5
overview Male, age 46
Sample 4
TPM: 15.7
Cell types%
Cells in tubules: 60
Cells in glomeruli: 25
Fibroblasts: 5
Other cell types: 10
overview Female, age 57
Sample 5
TPM: 2.6
Cell types%
Cells in tubules: 60
Cells in glomeruli: 10
Fibroblasts: 10
Other cell types: 20
overview Male, age 78
Sample 6
TPM: 4.6
Cell types%
Cells in tubules: 65
Cells in glomeruli: 10
Fibroblasts: 5
Other cell types: 20
overview Male, age 73
Sample 7
TPM: 7.2
Cell types%
Cells in tubules: 60
Cells in glomeruli: 10
Fibroblasts: 10
Other cell types: 20
overview Female, age 59
Sample 8
TPM: 11.2
Cell types%
Cells in tubules: 65
Cells in glomeruli: 10
Fibroblasts: 10
Other cell types: 15
overview Female, age 48
Sample 9
TPM: 4.7
Cell types%
Cells in tubules: 60
Cells in glomeruli: 5
Fibroblasts: 10
Other cell types: 25

KIDNEY - GTEx RNA-seq

Average RPKM

11.7

GTEx sample id

RPKM

 

Kidney - Cortex

Kidney - Cortex
RPKM: 11.7
Samples: 32

Max RPKM: 37.3
Min RPKM: 4.8
Std RPKM: 6.6
Median RPKM: 11
GTEX-RN64-1626-SM-48FD7 37.3
GTEX-12696-0926-SM-5FQTV 27.0
GTEX-13112-2126-SM-5GCO4 21.5
GTEX-ZYT6-2226-SM-5GIC9 18.6
GTEX-ZVZP-0926-SM-5GIDB 15.5
GTEX-1399S-0526-SM-5IJG8 13.8
GTEX-147F4-2626-SM-5Q5CS 13.4
GTEX-ZLFU-0926-SM-5P9F8 13.3
GTEX-11TTK-1926-SM-5PNW8 13.3
GTEX-13OVL-1826-SM-5KLZR 12.9
GTEX-ZYFG-1626-SM-5GZYY 12.4
GTEX-T5JC-1526-SM-4DM68 11.7
GTEX-QLQW-1626-SM-4R1K1 11.3
GTEX-12WSG-0826-SM-5EQ5A 11.3
GTEX-ZC5H-1726-SM-5HL7X 11.1
GTEX-UPIC-1126-SM-4IHLO 11.0
GTEX-13O1R-2526-SM-5N9FW 11.0
GTEX-145MN-0326-SM-5QGQI 10.5
GTEX-XPVG-0526-SM-4B65N 10.4
GTEX-11GS4-2326-SM-5A5KS 10.2
GTEX-1497J-0826-SM-5NQAJ 9.9
GTEX-13OVI-1126-SM-5KLZF 9.1
GTEX-13RTJ-2226-SM-5S2Q1 8.8
GTEX-QDVN-1626-SM-48TZC 6.8
GTEX-11OF3-1326-SM-5N9FJ 6.5
GTEX-P4QS-1126-SM-3NMD5 6.1
GTEX-13NYB-1726-SM-5N9G2 5.3
GTEX-ZYFD-1526-SM-5NQ7T 5.2
GTEX-Y5V6-2026-SM-5IFHO 5.1
GTEX-N7MS-1626-SM-3LK5F 5.0
GTEX-13OW6-1826-SM-5N9F9 5.0
GTEX-NPJ8-2226-SM-3TW8D 4.8
Show all

KIDNEY - FANTOM5 CAGE

Average Tags Per Million

16.3

FANTOM5 sample id

Sample description

Tags Per Million

Kidney
Tags Per Million: 16.3
FF:10017-101C8 60,62,63 years, female 16.3

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