Tissue expression of RNF146 - Staining in adipose tissue

SOFT TISSUE - Expression summary

Protein expression

RNA expression

HPA:	58.3	TPM
GTEx:	22.6	RPKM
FANTOM5:	44.9	Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:	Low
Fibroblasts:	Low
Peripheral nerve:	Low

Antibody staining	Antibody HPA027158	Antibody HPA027209
Adipocytes	Medium	Not detected
Fibroblasts	Low	Low
Peripheral nerve	Low	Not detected

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:	Medium
Fibroblasts:	Not detected

Antibody staining	Antibody HPA027158	Antibody HPA027209
Adipocytes	Medium	Medium
Fibroblasts	Not detected	Not detected

ADIPOSE TISSUE - HPA RNA-seq

Average TPM	58.3

Female, age 80

Sample 1
TPM: 57.9

Cell types%

Adipocytes: 95
Other cell types: 5

Female, age 45

Sample 2
TPM: 57.2

Female, age 57

Sample 3
TPM: 57.7

Cell types%

Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5

Female, age 74

Sample 4
TPM: 48.0

Cell types%

Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5

Female, age 59

Sample 5
TPM: 70.4

Cell types%

Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM	22.6

GTEx sample id

RPKM

Adipose - Subcutaneous

Adipose - Subcutaneous
RPKM: 24.1

Samples: 350

Max RPKM: 49.2
Min RPKM: 10.6
Std RPKM: 5.4
Median RPKM: 23.4

GTEX-P4QS-0226-SM-3NB1U

49.2

GTEX-TSE9-0226-SM-3DB84

43.1

GTEX-ZAJG-0226-SM-5HL81

42.1

GTEX-R55F-1426-SM-2TF53

41.5

GTEX-RVPU-2326-SM-2TF6R

41.2

GTEX-Y8LW-1926-SM-4WWFZ

40.0

GTEX-X5EB-2426-SM-4E3HX

39.2

GTEX-1211K-2226-SM-5FQU6

39.0

Show all

Adipose - Visceral (Omentum)

Adipose - Visceral (Omentum)
RPKM: 20.3

Samples: 227

Max RPKM: 45.5
Min RPKM: 8
Std RPKM: 6.5
Median RPKM: 19.5

GTEX-113JC-0726-SM-5GZZR

45.5

GTEX-11DYG-2026-SM-5EGGX

37.6

GTEX-13S7M-0826-SM-5QGQX

37.5

GTEX-1399T-1326-SM-5PNVH

37.0

GTEX-145MI-0826-SM-5SI95

37.0

GTEX-12WSG-0426-SM-5FQSE

34.1

GTEX-ZUA1-2126-SM-57YRB

34.0

GTEX-131YS-1726-SM-5HL7G

32.9

Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million	44.9

FANTOM5 sample id

Sample description

Tags Per Million

Adipose tissue
Tags Per Million: 44.9

FF:10010-101C1

65,65,76 years, mixed

44.9