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TISSUE ATLAS PRIMARY DATA BREAST

GENE/PROTEIN

Antibody validation


Dictionary

Breast

BREAST - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:157.8TPM
GTEx:197.1RPKM
FANTOM5:1600.4Tags Per Million

BREAST - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Glandular cells:Not detected
Myoepithelial cells:Not detected
 

Antibody staining

Antibody HPA003563

 

Antibody HPA020432

 

Antibody CAB004209

 

Adipocytes

Not detected   Medium   Not detected  

Glandular cells

Not detected   Medium   Not detected  

Myoepithelial cells

Not detected   Low   Not detected  
     
     
     

BREAST - HPA RNA-seq

Average TPM

157.8

overview Female, age 52
Sample 1
TPM: 211.6
Cell types%
Glandular cells: 15
Adipocytes: 5
Other cell types: 80
overview Female, age 80
Sample 2
TPM: 234.3
Cell types%
Glandular cells: 5
Adipocytes: 15
Other cell types: 80
overview Female, age 47
Sample 3
TPM: 25.9
Cell types%
Glandular cells: 5
Adipocytes: 5
Other cell types: 90
overview Female, age 38
Sample 4
TPM: 159.6
Cell types%
Glandular cells: 40
Adipocytes: 5
Other cell types: 55

BREAST - GTEx RNA-seq

Average RPKM

197.1

GTEx sample id

RPKM

 

Breast - Mammary Tissue

Breast - Mammary Tissue
RPKM: 197.1
Samples: 214

Max RPKM: 736.4
Min RPKM: 14.5
Std RPKM: 145.6
Median RPKM: 156.7
GTEX-XUJ4-1926-SM-4BOOV 736.4
GTEX-XBED-1626-SM-47JYN 727.1
GTEX-ZYW4-0826-SM-5GIDG 684.5
GTEX-146FH-0826-SM-5SI8T 659.2
GTEX-13NZ9-1026-SM-5MR5K 646.0
GTEX-13D11-1026-SM-5IJFB 626.5
GTEX-WI4N-1426-SM-3LK7H 562.8
GTEX-139T6-1626-SM-5PNYZ 556.2
GTEX-1211K-1926-SM-5EQLB 548.2
GTEX-ZTX8-1226-SM-4YCE9 539.1
GTEX-X4XY-0926-SM-4E3JD 522.3
GTEX-Y3I4-1526-SM-4TT7K 508.3
GTEX-13FHO-0826-SM-5L3E8 495.2
GTEX-ZAJG-0626-SM-5HL8X 484.2
GTEX-13O3Q-2226-SM-5KM4O 483.3
GTEX-ZY6K-1626-SM-5GZWV 481.1
GTEX-11LCK-2426-SM-5HL5F 474.4
GTEX-ZZPU-0626-SM-5E43T 464.4
GTEX-132AR-0826-SM-5EGK6 456.6
GTEX-1122O-1226-SM-5H113 431.4
GTEX-X15G-1626-SM-3NMB3 382.6
GTEX-13O3O-0826-SM-5K7WE 366.2
GTEX-S4P3-1326-SM-4AD6V 363.9
GTEX-ZF29-1926-SM-5S2P1 360.1
GTEX-145LT-0726-SM-5S2VM 347.8
GTEX-Y8LW-1626-SM-5IFHX 344.0
GTEX-147F4-2826-SM-5NQBN 342.0
GTEX-XYKS-1326-SM-4BRUN 338.5
GTEX-XUW1-2326-SM-4BOO5 335.4
GTEX-VUSG-2226-SM-4KKZO 331.0
GTEX-RWS6-1926-SM-47JXY 330.1
GTEX-13NZ8-0126-SM-5IJCT 325.9
GTEX-ZEX8-2226-SM-57WC6 322.7
GTEX-ZV6S-1826-SM-5NQ8D 315.6
GTEX-Y114-2026-SM-4TT7L 314.2
GTEX-TMMY-0726-SM-33HBE 310.7
GTEX-13W46-0826-SM-5LU3H 307.2
GTEX-UJHI-1426-SM-3DB9C 305.1
GTEX-12BJ1-1826-SM-5HL9N 302.0
GTEX-Y5V5-2126-SM-4WWFO 300.5
GTEX-13W3W-1226-SM-5LU4H 300.4
GTEX-132NY-0826-SM-5K7Y7 297.2
GTEX-13N11-1726-SM-5J1OJ 292.5
GTEX-13O3P-0826-SM-5L3DH 281.3
GTEX-VJWN-0726-SM-3GIJ8 280.4
GTEX-S33H-0326-SM-4AD6N 279.6
GTEX-QMRM-1626-SM-4R1KV 275.5
GTEX-Y5V6-2126-SM-4WWFX 273.2
GTEX-13N1W-0626-SM-5MR4U 271.8
GTEX-ZYWO-2326-SM-5GZY4 270.0
GTEX-13S86-1226-SM-5S2OA 267.6
GTEX-ZDTT-2126-SM-5S2OJ 267.1
GTEX-WYJK-1326-SM-3NB2T 264.7
GTEX-R3RS-0626-SM-48FE1 262.5
GTEX-ZVT4-1026-SM-57WC4 259.9
GTEX-QDT8-0626-SM-48TYW 259.0
GTEX-ZV7C-1826-SM-5NQ83 251.9
GTEX-1269C-2426-SM-5FQSN 241.3
GTEX-11I78-2226-SM-5PNYA 240.6
GTEX-SIU7-1626-SM-4BRUK 239.2
GTEX-11OF3-1926-SM-59889 237.0
GTEX-X4EP-2926-SM-3P5YQ 235.7
GTEX-11EM3-1326-SM-5N9C6 232.5
GTEX-13CF3-2126-SM-5IFJP 229.1
GTEX-W5X1-2326-SM-3GIL6 228.2
GTEX-13113-1726-SM-5GCOO 226.3
GTEX-139TU-0626-SM-5KM3X 220.5
GTEX-XUZC-1626-SM-4BRVP 220.1
GTEX-117YX-1426-SM-5H12H 220.0
GTEX-XMD2-0926-SM-4WWEF 219.2
GTEX-12WSK-2226-SM-5GCO5 216.3
GTEX-WRHU-0326-SM-3MJFY 215.8
GTEX-QEG5-0726-SM-4R1JQ 214.4
GTEX-13QIC-2326-SM-5LU5N 212.0
GTEX-ZPIC-1126-SM-5BC7F 211.3
GTEX-13FTW-1426-SM-5LZWZ 210.7
GTEX-ZVZQ-0826-SM-51MRF 210.7
GTEX-11EI6-0626-SM-5985T 210.2
GTEX-YFCO-1826-SM-4W1YH 206.6
GTEX-131YS-0626-SM-5EGKL 204.3
GTEX-WXYG-2226-SM-4E3IM 203.5
GTEX-Y5LM-1726-SM-4VDSX 203.3
GTEX-13NZB-2126-SM-5MR4Y 202.1
GTEX-WFON-1826-SM-3GILG 197.6
GTEX-11WQC-1726-SM-5GU4W 196.6
GTEX-ZC5H-2626-SM-5J2MG 188.5
GTEX-1313W-0826-SM-5EQ4T 188.1
GTEX-TKQ2-1826-SM-33HB2 187.0
GTEX-QVJO-1826-SM-447C9 186.5
GTEX-ZLV1-1426-SM-4WWES 183.9
GTEX-X261-0626-SM-3NMD9 183.7
GTEX-12WSB-0626-SM-59HJO 183.2
GTEX-145MN-1926-SM-5SIAI 176.8
GTEX-133LE-1726-SM-5K7VQ 174.9
GTEX-U412-1826-SM-4DXTJ 173.0
GTEX-13PVQ-1026-SM-5KM3M 172.9
GTEX-ZF2S-2026-SM-5E461 168.4
GTEX-ZLFU-2126-SM-4WWEV 166.8
GTEX-T2YK-2226-SM-32QPT 166.0
GTEX-1399U-1826-SM-5PNZ1 161.0
GTEX-ZDYS-1126-SM-5K7UB 160.8
GTEX-UPK5-2326-SM-3P5Z8 159.5
GTEX-ZA64-1526-SM-5CVMD 159.0
GTEX-11P81-1926-SM-5BC53 158.6
GTEX-WYBS-0926-SM-3NM94 158.3
GTEX-11TUW-1826-SM-5BC5D 157.6
GTEX-12WSN-1326-SM-5GCNT 156.7
GTEX-144GL-2026-SM-5LU3O 156.7
GTEX-SE5C-2126-SM-4BRUJ 156.7
GTEX-XMD1-0826-SM-4AT52 155.4
GTEX-14753-2426-SM-5LU8U 155.0
GTEX-S341-1526-SM-4AD6K 154.8
GTEX-11P7K-0726-SM-5EGKX 154.6
GTEX-XOT4-0726-SM-4GIAW 151.1
GTEX-WYVS-1726-SM-3NMAY 149.8
GTEX-Q2AG-0326-SM-48U1O 148.5
GTEX-S32W-2026-SM-4AD6E 146.9
GTEX-YJ8O-2226-SM-5IFHW 143.6
GTEX-11NV4-2026-SM-5N9DG 142.5
GTEX-XV7Q-2326-SM-4BRVZ 139.5
GTEX-11DXY-2326-SM-5GICW 139.1
GTEX-11TT1-2126-SM-5GU5Y 136.5
GTEX-ZTTD-1026-SM-51MRD 136.3
GTEX-U3ZN-1926-SM-4DXSG 136.1
GTEX-TML8-1226-SM-32QON 133.5
GTEX-ZDXO-0126-SM-5S2ND 132.5
GTEX-Y3IK-2326-SM-4WWDT 131.9
GTEX-T5JC-2126-SM-32PMO 130.1
GTEX-14E6E-1326-SM-5S2NR 129.2
GTEX-11O72-2126-SM-5N9FO 128.1
GTEX-S7SE-0826-SM-4AT4D 124.7
GTEX-13O61-1826-SM-5KM4I 124.6
GTEX-11ZUS-0826-SM-5FQUY 122.6
GTEX-Y8E4-1626-SM-5S2MW 122.5
GTEX-11DXZ-1926-SM-5GZZL 122.1
GTEX-13PL6-2926-SM-5L3I2 122.1
GTEX-ZVT2-1826-SM-5NQ8W 121.7
GTEX-T6MO-0326-SM-32QOK 117.5
GTEX-11ZTT-2326-SM-5EQLG 117.3
GTEX-WY7C-2726-SM-3NB3P 117.0
GTEX-S4Q7-1126-SM-4AD6R 116.0
GTEX-1192X-2326-SM-5987X 113.4
GTEX-Y9LG-1426-SM-5IFJZ 112.5
GTEX-U8XE-0826-SM-4E3J1 111.2
GTEX-R55F-1726-SM-2TF4R 107.9
GTEX-ZU9S-1926-SM-5NQBP 107.7
GTEX-ZF3C-2326-SM-5S2MZ 105.1
GTEX-11ONC-2126-SM-5HL6E 105.0
GTEX-XGQ4-0926-SM-4AT4U 104.8
GTEX-RU72-0626-SM-46MUI 103.7
GTEX-T6MN-0726-SM-32PML 102.3
GTEX-11EMC-2026-SM-5A5JV 100.6
GTEX-13FTX-1126-SM-5N9EN 98.7
GTEX-RUSQ-2026-SM-4GIAK 95.8
GTEX-11GSO-1926-SM-5A5K3 94.9
GTEX-1117F-2826-SM-5GZXL 93.6
GTEX-145MO-0826-SM-5NQBL 93.5
GTEX-11GS4-2126-SM-5A5KR 90.8
GTEX-R55D-0826-SM-48FEA 90.2
GTEX-131XW-0726-SM-5EGK3 89.6
GTEX-1314G-1226-SM-5BC6D 88.7
GTEX-YEC3-1026-SM-5IFI5 88.2
GTEX-11DXW-0626-SM-5N9ER 88.1
GTEX-12KS4-0126-SM-5Q5A5 87.8
GTEX-S4UY-0726-SM-4AD6X 86.8
GTEX-T2IS-1526-SM-32QPR 86.3
GTEX-ZVE2-1226-SM-5NQ8R 85.0
GTEX-12WSM-1726-SM-5BC6J 84.8
GTEX-11NSD-0926-SM-5N9DR 84.5
GTEX-14ABY-2126-SM-5QGQZ 83.1
GTEX-ZAB4-2526-SM-5HL8M 82.1
GTEX-QEL4-2126-SM-447AE 81.8
GTEX-R53T-1526-SM-48FEK 81.6
GTEX-145ME-1526-SM-5Q5F2 81.3
GTEX-U3ZH-1426-SM-4DXSR 77.5
GTEX-YB5K-1626-SM-5IFIN 76.8
GTEX-117XS-1926-SM-5GICO 75.9
GTEX-ZYT6-0126-SM-5E45J 75.7
GTEX-ZVTK-0326-SM-51MRR 74.6
GTEX-14AS3-1626-SM-5S2OY 73.4
GTEX-11PRG-0826-SM-5EQ6A 72.9
GTEX-REY6-2426-SM-48FF5 72.1
GTEX-12ZZX-1126-SM-5EGKB 69.9
GTEX-ZYFC-0826-SM-5E44K 69.4
GTEX-ZUA1-1526-SM-59HLS 67.8
GTEX-YFC4-1426-SM-5IFJG 67.6
GTEX-ZQUD-1926-SM-51MSA 67.2
GTEX-144GM-0926-SM-5O994 66.4
GTEX-UTHO-1026-SM-3GAF7 66.3
GTEX-TKQ1-0226-SM-33HB5 66.2
GTEX-13CF2-2026-SM-5K7VI 62.9
GTEX-13OW8-0226-SM-5K7UP 61.8
GTEX-ZXES-0826-SM-5E43C 60.3
GTEX-XMK1-1126-SM-4IHJ8 60.2
GTEX-139T8-0826-SM-5L3DE 58.3
GTEX-WOFL-0826-SM-3MJG1 57.3
GTEX-11EQ9-1826-SM-5Q5AJ 55.3
GTEX-11WQK-2426-SM-5GU5C 51.8
GTEX-XQ3S-1326-SM-4BOPQ 50.8
GTEX-13OW5-2226-SM-5L3HC 48.2
GTEX-ZWKS-2826-SM-5NQ74 48.1
GTEX-ZT9W-2026-SM-51MRA 44.6
GTEX-PSDG-1626-SM-48TCQ 40.3
GTEX-11DZ1-0326-SM-5N9BN 39.9
GTEX-13FTY-2226-SM-5J1ND 39.6
GTEX-XQ8I-2426-SM-4WAXY 37.0
GTEX-YB5E-1726-SM-5IFJ3 35.3
GTEX-T5JW-2026-SM-4DM63 32.9
GTEX-111YS-1926-SM-5GICC 32.4
GTEX-Y111-2026-SM-4SOJA 32.0
GTEX-ZZ64-1226-SM-5E43R 31.5
GTEX-132Q8-1426-SM-5EGK7 30.9
GTEX-ZQG8-0726-SM-5P9H9 29.7
GTEX-11P82-1326-SM-5HL62 14.5
Show all

BREAST - FANTOM5 CAGE

Average Tags Per Million

1600.4

FANTOM5 sample id

Sample description

Tags Per Million

Breast
Tags Per Million: 1600.4
FF:10080-102A8 77 years, female 1600.4

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