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TISSUE ATLAS PRIMARY DATA CEREBRAL CORTEX

GENE/PROTEIN

Antibody validation


Dictionary

Cerebral cortex

Tissue proteome

Brain
Extended brain samples

CEREBRAL CORTEX - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:127.2TPM
GTEx:7.3RPKM

CEREBRAL CORTEX - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glial cells:Not detected
Neuronal cells:Not detected
Neuropil:Not detected
 

Antibody staining

Antibody HPA003563

 

Antibody HPA020432

 

Antibody CAB004209

 

Endothelial cells

Medium   Not detected   Not detected  

Glial cells

Not detected   Not detected   Not detected  

Neuronal cells

Not detected   Medium   Not detected  

Neuropil

Not detected   Low   Not detected  
     
     
     

CEREBRAL CORTEX - HPA RNA-seq

Average TPM

127.2

N/A Male, age 5
Sample 1
TPM: 128.2
overview Female, age 40
Sample 2
TPM: 76.0
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65
overview Male, age 70
Sample 3
TPM: 177.4
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM

7.3

GTEx sample id

RPKM

 

Brain - Cortex

Brain - Cortex
RPKM: 6.7
Samples: 114

Max RPKM: 42.8
Min RPKM: 0.7
Std RPKM: 6.2
Median RPKM: 4.6
GTEX-N7MT-1126-SM-5SI7V 42.8
GTEX-132Q8-3026-SM-5PNVG 29.5
GTEX-NPJ8-1526-SM-2D7VU 26.6
GTEX-X585-3026-SM-46MWF 25.4
GTEX-13JUV-2926-SM-5LZX7 22.8
GTEX-144FL-3026-SM-5O99C 20.9
GTEX-11EI6-3026-SM-5GZZO 18.3
GTEX-12WSA-2926-SM-5EQ4D 17.1
GTEX-QMR6-1426-SM-32PLA 14.7
GTEX-13X6K-2926-SM-5Q5D5 13.8
GTEX-QVJO-1426-SM-2S1QY 13.1
GTEX-11NV4-2126-SM-5N9DS 12.7
GTEX-13FHO-3026-SM-5J1O9 12.6
GTEX-13NYC-2826-SM-5K7WR 12.1
GTEX-11TTK-2926-SM-5PNYP 10.7
GTEX-13OVJ-2826-SM-5L3GW 10.6
GTEX-11OC5-0726-SM-5P9JK 10.5
GTEX-WWYW-3126-SM-3NB39 10.1
GTEX-PWO3-0926-SM-2I5EY 9.8
GTEX-111FC-3126-SM-5GZZ2 9.6
GTEX-QVUS-2826-SM-3GADB 8.9
GTEX-X4XX-3026-SM-3NMB2 8.8
GTEX-11NUK-2926-SM-5A5MD 8.7
GTEX-WHSE-3026-SM-3P5ZH 8.7
GTEX-T2IS-3026-SM-32QPM 8.5
GTEX-11WQK-3026-SM-5EQL6 8.3
GTEX-1399T-3026-SM-5KLZC 8.3
GTEX-NPJ7-2726-SM-2I3FT 8.3
GTEX-11DXY-3226-SM-5GIDE 8.2
GTEX-ZUA1-3026-SM-59HJC 8.1
GTEX-1192X-3126-SM-5N9BY 7.9
GTEX-Q2AG-2926-SM-2HMJ3 7.9
GTEX-13NYS-3126-SM-5KLYV 7.8
GTEX-131YS-3126-SM-5KLYT 7.5
GTEX-13IVO-2926-SM-5L3CZ 7.4
GTEX-13X6J-3026-SM-5Q5CU 7.4
GTEX-145LS-3126-SM-5Q5BY 7.3
GTEX-13G51-3026-SM-5IJB8 6.7
GTEX-ZZPT-3026-SM-5GZXH 6.6
GTEX-11PRG-2926-SM-5987A 6.1
GTEX-11ONC-2926-SM-5P9JM 6.0
GTEX-12WSC-3026-SM-5GCNF 6.0
GTEX-13PVQ-3026-SM-5SI93 6.0
GTEX-T5JC-2426-SM-3NMDB 5.8
GTEX-11GS4-3126-SM-5A5LH 5.5
GTEX-12ZZY-3026-SM-5GCOU 5.5
GTEX-13JVG-3126-SM-5L3FH 5.5
GTEX-13OVH-3026-SM-5MR4N 5.5
GTEX-11ZUS-2926-SM-5FQSL 5.4
GTEX-13QIC-2926-SM-5J2NF 5.3
GTEX-14BMV-3026-SM-5S2PQ 5.3
GTEX-1313W-3126-SM-5LZUI 5.0
GTEX-QDT8-2926-SM-32PKC 5.0
GTEX-117XS-3026-SM-5N9CA 4.8
GTEX-1445S-3026-SM-5O9BR 4.7
GTEX-UTHO-3026-SM-3GAFB 4.7
GTEX-XLM4-3026-SM-4AT6L 4.7
GTEX-11O72-2926-SM-5BC4V 4.5
GTEX-12WSD-3126-SM-5HL7P 4.4
GTEX-13FLW-1426-SM-5K7YE 4.4
GTEX-13OW6-3026-SM-5J2MI 4.4
GTEX-13O3Q-2926-SM-5KM45 4.3
GTEX-145MH-3026-SM-5Q5DZ 4.2
GTEX-Y111-2726-SM-4TT3N 4.2
GTEX-11GSP-3226-SM-5986O 4.1
GTEX-1128S-2726-SM-5H12C 4.0
GTEX-139T8-1026-SM-5J2MC 3.9
GTEX-145MF-2726-SM-5O995 3.9
GTEX-13FXS-3126-SM-5J2NN 3.8
GTEX-12ZZX-2926-SM-5GCOQ 3.7
GTEX-13FHP-3026-SM-5IJBS 3.7
GTEX-13O3O-3126-SM-5KM3H 3.7
GTEX-13VXU-2926-SM-5LU5C 3.7
GTEX-ZAJG-3126-SM-5HL9J 3.7
GTEX-ZAK1-3026-SM-5S2MJ 3.7
GTEX-14A5I-2926-SM-5Q5CQ 3.6
GTEX-Y8DK-0826-SM-4TT3T 3.6
GTEX-YJ89-3026-SM-5IFJI 3.6
GTEX-11GSO-2926-SM-5HL73 3.5
GTEX-12126-1026-SM-5P9JJ 3.4
GTEX-1117F-3226-SM-5N9CT 3.3
GTEX-RNOR-2326-SM-2TF4I 3.3
GTEX-11OF3-2926-SM-5HL78 3.2
GTEX-13NYB-3026-SM-5IJD7 3.2
GTEX-13S7M-3126-SM-5RQJQ 3.2
GTEX-YFC4-3126-SM-5PNV6 3.2
GTEX-T6MN-2626-SM-32PMQ 3.0
GTEX-WVLH-3026-SM-3MJG9 3.0
GTEX-PVOW-2526-SM-2XCF7 2.8
GTEX-ZVT3-3026-SM-5E43N 2.8
GTEX-147GR-3026-SM-5S2ML 2.7
GTEX-R55F-1326-SM-5S2V4 2.7
GTEX-WZTO-2926-SM-3NM9I 2.7
GTEX-WL46-2926-SM-3LK82 2.6
GTEX-Z93S-2926-SM-57WB9 2.6
GTEX-144GL-3026-SM-5Q5CW 2.5
GTEX-ZYFD-3026-SM-5E44C 2.5
GTEX-12ZZW-2926-SM-5LZUP 2.4
GTEX-131XW-3126-SM-5LZUC 2.4
GTEX-14ASI-3026-SM-5S2PN 2.3
GTEX-RU72-3026-SM-5SI7Y 2.3
GTEX-12WSH-3026-SM-5CVNI 2.2
GTEX-12ZZZ-3026-SM-5BC67 2.0
GTEX-13PL6-3126-SM-5LUAR 2.0
GTEX-13SLX-3126-SM-5S2Q5 2.0
GTEX-145MG-3026-SM-5RQJA 2.0
GTEX-TSE9-3026-SM-3DB76 2.0
GTEX-XOTO-3026-SM-4B65M 1.6
GTEX-11EMC-3226-SM-5EGKW 1.5
GTEX-13OW8-2826-SM-5L3GC 1.4
GTEX-OXRN-2426-SM-2I5EQ 1.4
GTEX-11DXW-1126-SM-5H12Q 1.3
GTEX-ZE7O-3126-SM-5HL5X 1.0
GTEX-13OW7-3026-SM-5L3GY 0.7
Show all
 

Brain - Frontal Cortex (BA9)

Brain - Frontal Cortex (BA9)
RPKM: 7.9
Samples: 108

Max RPKM: 84.8
Min RPKM: 0.5
Std RPKM: 10.1
Median RPKM: 5.3
GTEX-NL4W-0011-R10A-SM-2I3DY 84.8
GTEX-XMD1-0011-R10A-SM-4AT4A 45.8
GTEX-X585-0011-R10A-SM-46MUY 34.7
GTEX-QVJO-0011-R10A-SM-2S1QJ 31.6
GTEX-QVUS-0011-R10A-SM-3GIK3 19.9
GTEX-11ZUS-0011-R10b-SM-5BC79 19.5
GTEX-X4EP-0011-R10B-SM-4QASJ 18.3
GTEX-13OVJ-0011-R10b-SM-5L3HT 17.1
GTEX-N7MT-0011-R10A-SM-2I3E1 16.7
GTEX-132Q8-0011-R10b-SM-5DUWZ 16.4
GTEX-QMR6-0011-R10A-SM-32PKO 16.0
GTEX-13X6K-0011-R10a-SM-5P9JR 15.1
GTEX-12ZZY-0011-R10b-SM-5HL7W 14.2
GTEX-13N2G-0011-R10a-SM-5MR34 14.1
GTEX-P44H-0011-R10A-SM-2XCEK 14.1
GTEX-13NYS-0011-R10a-SM-5MR4S 13.9
GTEX-T5JC-0011-R10A-SM-32PM2 13.7
GTEX-13JUV-0011-R10b-SM-5LZXR 12.9
GTEX-13G51-0011-R10b-SM-5LZYF 12.8
GTEX-NPJ7-0011-R10A-SM-2I3E5 12.3
GTEX-WWYW-0011-R10A-SM-3NB35 11.3
GTEX-12WSC-0011-R10a-SM-5GU57 10.5
GTEX-13X6I-0011-R10a-SM-5PNWI 10.5
GTEX-13QJC-0011-R10a-SM-5SI63 10.3
GTEX-12WSA-0011-R10b-SM-5P9ET 10.2
GTEX-131YS-0011-R10b-SM-5EQ5N 10.1
GTEX-13JVG-0011-R10b-SM-5KM2P 9.5
GTEX-145LS-0011-R10a-SM-5PNUQ 9.4
GTEX-N7MS-0011-R10A-SM-2HMJK 8.6
GTEX-13FLV-0011-R10b-SM-5LZZ2 8.3
GTEX-13FXS-0011-R10a-SM-5J2MA 8.3
GTEX-11WQK-0011-R10a-SM-5BC6R 7.6
GTEX-13NYB-0011-R10a-SM-5KM43 7.6
GTEX-13FHO-0011-R10b-SM-5J2MM 7.2
GTEX-13O3Q-0011-R10b-SM-5KM39 7.1
GTEX-ZDXO-0011-R10a-SM-4WWD8 7.1
GTEX-OXRO-0011-R10A-SM-2I5EH 7.0
GTEX-XLM4-0011-R10A-SM-4AT5P 7.0
GTEX-X4XX-0011-R10B-SM-46MWO 6.9
GTEX-1445S-0011-R10a-SM-5PNWB 6.7
GTEX-11H98-0011-R10b-SM-5NQ98 6.5
GTEX-NPJ8-0011-R10A-SM-2YUMO 6.5
GTEX-13OVL-0011-R10a-SM-5L3GS 6.4
GTEX-139TS-0011-R10a-SM-5K7TU 6.1
GTEX-13QIC-0011-R10a-SM-5O9C7 6.1
GTEX-13X6J-0011-R10b-SM-5PNWA 5.8
GTEX-ZUA1-0011-R10a-SM-51MT6 5.8
GTEX-12WSF-0011-R10a-SM-5LZVH 5.7
GTEX-1313W-0011-R10b-SM-5DUXA 5.7
GTEX-TSE9-0011-R10A-SM-3DB7O 5.7
GTEX-14753-0011-R10b-SM-5S2WE 5.6
GTEX-X261-0011-R10B-SM-4E3JT 5.6
GTEX-Y8DK-0011-R10A-SM-4SOK1 5.6
GTEX-Q2AG-0011-R10A-SM-2HMLA 5.4
GTEX-11WQC-0011-R10a-SM-57WCT 5.1
GTEX-13FLW-0011-R10b-SM-5LZZF 5.1
GTEX-13RTJ-0011-R10b-SM-5O9CW 5.1
GTEX-13SLX-0011-R10a-SM-5P9HV 5.1
GTEX-1477Z-0011-R10b-SM-5S2RF 5.1
GTEX-13IVO-0011-R10a-SM-5LZY3 5.0
GTEX-145MH-0011-R10b-SM-5PNUK 5.0
GTEX-12ZZZ-0011-R10a-SM-5P9HC 4.9
GTEX-147GR-0011-R10b-SM-5S2UM 4.9
GTEX-OXRN-0011-R10A-SM-2I5GC 4.5
GTEX-WZTO-0011-R10B-SM-4E3KB 4.1
GTEX-YFC4-0011-R10a-SM-4SOK5 4.1
GTEX-ZVT3-0011-R10b-SM-57WB6 4.0
GTEX-ZVZQ-0011-R10b-SM-51MRT 4.0
GTEX-11GSP-0011-R10a-SM-5NQ7J 3.9
GTEX-ZF28-0011-R10a-SM-4WWEH 3.9
GTEX-NL3H-0011-R10A-SM-2I3E9 3.8
GTEX-ZAB4-0011-R10a-SM-4SOKH 3.8
GTEX-13OW8-0011-R10a-SM-5L3H6 3.5
GTEX-13O3O-0011-R10a-SM-5LUA9 3.4
GTEX-12WSH-0011-R10a-SM-5LZUS 3.3
GTEX-ZE7O-0011-R10a-SM-57WAZ 3.3
GTEX-WVLH-0011-R10A-SM-3MJFM 3.1
GTEX-ZXG5-0011-R10a-SM-57WDD 3.1
GTEX-T6MN-0011-R10A-SM-32QP7 3.0
GTEX-YJ89-0011-R10a-SM-4SOK9 3.0
GTEX-ZV68-0011-R10a-SM-51MT7 2.9
GTEX-12WSM-0011-R10a-SM-5DUWV 2.8
GTEX-13FTZ-0011-R10b-SM-5KLZS 2.8
GTEX-13OW6-0011-R10a-SM-5L3HE 2.6
GTEX-12126-0011-R10b-SM-5BC6T 2.4
GTEX-12ZZX-0011-R10b-SM-5DUWK 2.4
GTEX-13SLW-0011-R10a-SM-5S2UI 2.3
GTEX-QDT8-0011-R10A-SM-32PKG 2.3
GTEX-WL46-0011-R10A-SM-3MJFQ 2.3
GTEX-13S7M-0011-R10b-SM-5PNZB 2.2
GTEX-14BIN-0011-R10a-SM-5S2UA 2.0
GTEX-131XH-0011-R10a-SM-5EGLJ 1.8
GTEX-13CZV-0011-R10b-SM-5LZYD 1.8
GTEX-13NZA-0011-R10b-SM-5KM54 1.7
GTEX-13OW7-0011-R10a-SM-5L3H3 1.7
GTEX-145MG-0011-R10a-SM-5PNWG 1.7
GTEX-12ZZW-0011-R10b-SM-5HL9X 1.5
GTEX-S7SE-0011-R10A-SM-2XCDF 1.5
GTEX-Z93S-0011-R10a-SM-4RGNM 1.5
GTEX-14ASI-0011-R10b-SM-5S2VZ 1.2
GTEX-12WSE-0011-R10b-SM-5P9JV 1.1
GTEX-145LU-0011-R10a-SM-5PNWJ 1.1
GTEX-12WSD-0011-R10b-SM-5GU79 1.0
GTEX-131XW-0011-R10a-SM-5DUVA 0.8
GTEX-147F4-0011-R10b-SM-5S2WC 0.7
GTEX-RVPU-0011-R10A-SM-2XCAH 0.7
GTEX-13N1W-0011-R10b-SM-5MR4H 0.6
GTEX-14BIL-0011-R10a-SM-5SI75 0.5
Show all

CEREBRAL CORTEX - FANTOM5 CAGE

No Fantom CAGE analysis found for this gene / tissue

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