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UBA1

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:80.4TPM
GTEx:40.9RPKM
FANTOM5:134.7Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Low
Glandular cells:Medium
Peripheral nerve/ganglion:High
 

Antibody staining

Antibody HPA000289

  

Antibody CAB019435

  

Antibody CAB073410

  

Endothelial cells

 Not detected   Medium   Low  

Glandular cells

 Not detected   Medium   Medium  

Peripheral nerve/ganglion

 Medium   High  
     
     
     

COLON - HPA RNA-seq

Average TPM

80.4
overview Male, age 54
Sample 1
TPM: 72.9
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
TPM: 67.2
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
TPM: 65.4
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
TPM: 80.0
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
TPM: 52.4
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
TPM: 99.9
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
TPM: 81.8
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78
Sample 8
TPM: 87.0
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84
Sample 9
TPM: 81.5
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80
Sample 10
TPM: 76.6
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78
Sample 11
TPM: 109.5
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69
Sample 12
TPM: 93.7
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72
Sample 13
TPM: 77.6
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

40.9

GTEx sample id

RPKM
 

Colon - Sigmoid
Colon - Sigmoid
RPKM: 37.9
Samples: 149

Max RPKM: 52.4
Min RPKM: 24.4
Std RPKM: 5
Median RPKM: 37.8
GTEX-132AR-2826-SM-5IJFV 52.4
GTEX-131XG-1526-SM-5GCNQ 50.5
GTEX-11TT1-0926-SM-5GU5M 50.2
GTEX-XV7Q-2226-SM-4BRVY 48.8
GTEX-XAJ8-0726-SM-47JY5 48.7
GTEX-11P81-1426-SM-5P9JN 47.5
GTEX-12WSL-1826-SM-5LZW9 47.1
GTEX-146FH-2426-SM-5Q5EW 46.9
Show all
 

Colon - Transverse
Colon - Transverse
RPKM: 43.2
Samples: 196

Max RPKM: 68.7
Min RPKM: 28.1
Std RPKM: 7.8
Median RPKM: 42.1
GTEX-131XG-1826-SM-5LZV4 68.7
GTEX-Q734-1126-SM-48TZY 66.9
GTEX-UJHI-1126-SM-4IHLN 61.0
GTEX-XUJ4-2026-SM-4BOOW 61.0
GTEX-ZF2S-1926-SM-4WWAN 60.4
GTEX-PWOO-1326-SM-48TCJ 60.1
GTEX-R53T-1326-SM-48FCQ 60.1
GTEX-U3ZN-2126-SM-4DXU1 59.0
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

134.7

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 134.7
FF:10014-101C5 62,83,84 years, mixed 134.7

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.