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TISSUE ATLAS PRIMARY DATA HIPPOCAMPUS
MOUSE BRAIN

GENE/PROTEIN

Antibody validation


Dictionary

Hippocampus

HIPPOCAMPUS - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:1540.3RPKM
FANTOM5:3376.0Tags Per Million

HIPPOCAMPUS - Annotated protein expression

Annotated protein
expression

Glial cells:Medium
Neuronal cells:Not detected
 

Antibody staining

Antibody HPA056030

 

Antibody HPA063513

 

Antibody CAB000039

 

Glial cells

Medium   Low   Medium  

Neuronal cells

Not detected   Not detected   Not detected  
     
     
     

HIPPOCAMPUS - HPA RNA-seq

Pending HPA RNA-seq analysis


HIPPOCAMPUS - GTEx RNA-seq

Average RPKM

1540.3

GTEx sample id

RPKM

900.41208.31716.1188.42657.301,0002,0003,0004,0005,0006,0007,000
 
900.41208.31716.1188.42657.301,0002,0003,0004,0005,0006,0007,000

Brain - Hippocampus

Brain - Hippocampus
RPKM: 1540.3
Samples: 94

Max RPKM: 7540.4
Min RPKM: 188.4
Std RPKM: 1200
Median RPKM: 1208.3
GTEX-13OW5-0011-R1b-SM-5L3GE 7540.4
GTEX-QVUS-0011-R1A-SM-3GAD2 7041.0
GTEX-13G51-0011-R1a-SM-5LZYR 4937.3
GTEX-13RTJ-0011-R1a-SM-5O9D9 4067.7
GTEX-13QIC-0011-R1a-SM-5O9CJ 3813.2
GTEX-13QJC-0011-R1b-SM-5S2UU 3567.7
GTEX-11ZTS-0011-R1a-SM-5BC71 3345.8
GTEX-13NYS-0011-R1b-SM-5MR55 3015.8
GTEX-PWO3-0011-R1A-SM-2I5EW 2657.3
GTEX-13JUV-0011-R1a-SM-5LZY4 2554.9
GTEX-13OVL-0011-R1a-SM-5L3H5 2532.3
GTEX-13S7M-0011-R1b-SM-5PNZE 2444.5
GTEX-13OVJ-0011-R1b-SM-5L3I6 2437.1
GTEX-NPJ7-0011-R1a-SM-3GACT 2328.0
GTEX-13NZA-0011-R1b-SM-5LUAF 2284.0
GTEX-132Q8-0011-R1a-SM-5EGLK 2176.2
GTEX-13JVG-0011-R1a-SM-5KM32 2158.9
GTEX-11GSO-0011-R1b-SM-57WD3 2125.2
GTEX-13N1W-0011-R1b-SM-5MR4T 1954.6
GTEX-12WSM-0011-R1a-SM-5LZW6 1953.6
GTEX-13X6I-0011-R1b-SM-5PNZC 1836.5
GTEX-13OW6-0011-R1a-SM-5L3HQ 1801.0
GTEX-13N2G-0011-R1b-SM-5MR3G 1726.8
GTEX-12ZZX-0011-R1a-SM-5EQ6B 1718.6
GTEX-X4XX-0011-R1B-SM-3P622 1708.8
GTEX-13CF2-0011-R1a-SM-5LZY1 1707.4
GTEX-XMD1-0011-R1A-SM-4AT4C 1670.9
GTEX-NPJ8-0011-R1a-SM-33HCB 1638.4
GTEX-1212Z-0011-R1b-SM-5BC72 1638.1
GTEX-1399T-0011-R1b-SM-5DUWN 1598.5
GTEX-S7SE-0011-R1A-SM-2XCDE 1595.9
GTEX-ZUA1-0011-R1a-SM-4YCE2 1594.8
GTEX-N7MT-0011-R1a-SM-5SI7S 1580.9
GTEX-13OW7-0011-R1b-SM-5L3HF 1572.3
GTEX-13RTL-0011-R1a-SM-5PNZ8 1565.9
GTEX-QVJO-0011-R1A-SM-2S1QI 1547.4
GTEX-UTHO-0011-R1A-SM-3GIJO 1499.5
GTEX-ZVZQ-0011-R1a-SM-57WBU 1473.0
GTEX-13FHO-0011-R1b-SM-5KLZG 1462.2
GTEX-12WSB-0011-R1b-SM-5P9EY 1432.8
GTEX-131YS-0011-R1a-SM-5DUXC 1382.6
GTEX-13FXS-0011-R1a-SM-5K7U6 1365.3
GTEX-QDT8-0011-R1A-SM-32PKS 1322.3
GTEX-12WSH-0011-R1a-SM-5GU5V 1288.0
GTEX-N7MS-0011-R1a-SM-2HMJG 1255.5
GTEX-11ONC-0011-R1a-SM-57WD4 1240.8
GTEX-1313W-0011-R1b-SM-5EQ4A 1208.3
GTEX-131XH-0011-R1a-SM-5DUWA 1208.2
GTEX-WZTO-0011-R1B-SM-3NMAR 1202.5
GTEX-13OW8-0011-R1a-SM-5L3HI 1164.2
GTEX-YJ89-0011-R1a-SM-4RGLS 1144.2
GTEX-X585-0011-R1B-SM-46MVE 1104.7
GTEX-11ZVC-0011-R1b-SM-5BC6M 1087.8
GTEX-XOTO-0011-R1B-SM-4B65C 1087.6
GTEX-Y8DK-0011-R1A-SM-4RGLO 1082.0
GTEX-P44H-0011-R1A-SM-3NM8J 1064.7
GTEX-13FLW-0011-R1b-SM-5LZX2 1045.6
GTEX-13SLW-0011-R1a-SM-5S2W7 1044.0
GTEX-QMR6-0011-R1A-SM-32PKW 1039.1
GTEX-145LU-0011-R1a-SM-5Q5CE 1033.9
GTEX-Q2AG-0011-R1A-SM-2HMJI 1033.1
GTEX-WL46-0011-R1A-SM-3LK6M 1015.9
GTEX-13NYB-0011-R1b-SM-5KM4F 984.0
GTEX-139TT-0011-R1a-SM-5LZVD 983.5
GTEX-T5JC-0011-R1A-SM-32PM6 981.6
GTEX-WHSE-0011-R1A-SM-3P5ZK 969.0
GTEX-PVOW-0011-R1A-SM-32PL6 940.4
GTEX-WWYW-0011-R1A-SM-3TW8G 938.1
GTEX-14ASI-0011-R1b-SM-5S2TY 924.8
GTEX-145LS-0011-R1b-SM-5PNUP 900.9
GTEX-WVLH-0011-R1A-SM-4MVOK 900.2
GTEX-11UD1-0011-R1b-SM-5BC7D 890.1
GTEX-144GO-0011-R1a-SM-5PNWO 868.4
GTEX-ZAB4-0011-R1a-SM-4RGNO 833.3
GTEX-13FHP-0011-R1b-SM-5K7XL 819.3
GTEX-13O3Q-0011-R1b-SM-5KM3L 805.0
GTEX-T6MN-0011-R1A-SM-32QOY 787.8
GTEX-13112-0011-R1b-SM-5HL7K 775.0
GTEX-12WSD-0011-R1b-SM-5LZVY 727.9
GTEX-13O3O-0011-R1b-SM-5KM2K 717.0
GTEX-YFC4-0011-R1a-SM-4V6EH 708.9
GTEX-144GL-0011-R1a-SM-5PNZ5 705.2
GTEX-TSE9-0011-R1A-SM-3DB7E 691.1
GTEX-12WSF-0011-R1a-SM-5DUVI 547.2
GTEX-12WSE-0011-R1b-SM-5GU4V 535.0
GTEX-NL3H-0011-R1a-SM-48TDJ 429.6
GTEX-ZF28-0011-R1a-SM-4WWD1 413.0
GTEX-ZE7O-0011-R1a-SM-57WDM 402.2
GTEX-145MH-0011-R1b-SM-5PNWY 389.7
GTEX-13FTY-0011-R1a-SM-5LZXE 389.1
GTEX-RNOR-0011-R1A-SM-5SI8F 354.3
GTEX-13PDP-0011-R1a-SM-5PNX5 326.5
GTEX-R55E-0011-R1A-SM-2TC6N 238.0
GTEX-139T8-0011-R1a-SM-5HL75 188.4
Show all

HIPPOCAMPUS - FANTOM5 CAGE

Average Tags Per Million

3376.0

FANTOM5 sample id

Sample description

Tags Per Million

Hippocampus
Tags Per Million: 3376.0
FF:10153-102I9 76 years, female 6311.7
FF:10169-103B7 60 years, female 2595.7
FF:10374-105G5 89 years, female 1220.4

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