We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
PDHA1
  • TISSUE

  • premium

    CELL

  • CANCER

TISSUE ATLAS PRIMARY DATA BREAST

GENE/PROTEIN

Antibody validation


Dictionary

Breast

BREAST - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:60.3TPM
GTEx:20.7RPKM
FANTOM5:41.6Tags Per Million

BREAST - Annotated protein expression

Annotated protein
expression

Adipocytes:Low
Glandular cells:High
Myoepithelial cells:Medium
 

Antibody staining

Antibody HPA047487

 

Antibody HPA047864

 

Antibody HPA063053

 

Adipocytes

Not detected   Not detected   Low  

Glandular cells

Not detected   Medium   High  

Myoepithelial cells

Not detected   Medium   Medium  
     
     
     

BREAST - HPA RNA-seq

Average TPM

60.3

overview Female, age 52
Sample 1
TPM: 46.6
Cell types%
Glandular cells: 15
Adipocytes: 5
Other cell types: 80
overview Female, age 80
Sample 2
TPM: 71.1
Cell types%
Glandular cells: 5
Adipocytes: 15
Other cell types: 80
overview Female, age 47
Sample 3
TPM: 57.8
Cell types%
Glandular cells: 5
Adipocytes: 5
Other cell types: 90
overview Female, age 38
Sample 4
TPM: 65.8
Cell types%
Glandular cells: 40
Adipocytes: 5
Other cell types: 55

BREAST - GTEx RNA-seq

Average RPKM

20.7

GTEx sample id

RPKM

 

Breast - Mammary Tissue

Breast - Mammary Tissue
RPKM: 20.7
Samples: 214

Max RPKM: 56.4
Min RPKM: 11.5
Std RPKM: 6.6
Median RPKM: 18.4
GTEX-WY7C-2726-SM-3NB3P 56.4
GTEX-YB5K-1626-SM-5IFIN 48.1
GTEX-117YX-1426-SM-5H12H 45.7
GTEX-11P82-1326-SM-5HL62 43.7
GTEX-ZQG8-0726-SM-5P9H9 40.3
GTEX-13CF3-2126-SM-5IFJP 39.5
GTEX-11ZTT-2326-SM-5EQLG 37.9
GTEX-ZPIC-1126-SM-5BC7F 37.5
GTEX-YB5E-1726-SM-5IFJ3 35.7
GTEX-XUZC-1626-SM-4BRVP 35.1
GTEX-XGQ4-0926-SM-4AT4U 34.4
GTEX-ZDXO-0126-SM-5S2ND 34.4
GTEX-13FTX-1126-SM-5N9EN 33.3
GTEX-11TT1-2126-SM-5GU5Y 33.2
GTEX-ZYWO-2326-SM-5GZY4 31.0
GTEX-ZDYS-1126-SM-5K7UB 30.6
GTEX-ZZ64-1226-SM-5E43R 30.3
GTEX-R53T-1526-SM-48FEK 30.2
GTEX-13FTW-1426-SM-5LZWZ 30.0
GTEX-11I78-2226-SM-5PNYA 29.6
GTEX-ZAB4-2526-SM-5HL8M 28.6
GTEX-1211K-1926-SM-5EQLB 28.4
GTEX-ZQUD-1926-SM-51MSA 28.1
GTEX-145ME-1526-SM-5Q5F2 27.8
GTEX-X4XY-0926-SM-4E3JD 27.8
GTEX-S4Q7-1126-SM-4AD6R 27.3
GTEX-T5JW-2026-SM-4DM63 27.3
GTEX-Y5V6-2126-SM-4WWFX 27.2
GTEX-R55D-0826-SM-48FEA 27.0
GTEX-XMK1-1126-SM-4IHJ8 27.0
GTEX-SE5C-2126-SM-4BRUJ 26.8
GTEX-139T6-1626-SM-5PNYZ 26.7
GTEX-ZLFU-2126-SM-4WWEV 26.3
GTEX-UTHO-1026-SM-3GAF7 26.2
GTEX-PSDG-1626-SM-48TCQ 26.0
GTEX-T6MO-0326-SM-32QOK 25.8
GTEX-13W3W-1226-SM-5LU4H 25.7
GTEX-Y114-2026-SM-4TT7L 25.7
GTEX-ZT9W-2026-SM-51MRA 25.7
GTEX-XQ3S-1326-SM-4BOPQ 25.6
GTEX-QMRM-1626-SM-4R1KV 25.3
GTEX-132AR-0826-SM-5EGK6 25.0
GTEX-REY6-2426-SM-48FF5 24.8
GTEX-ZYT6-0126-SM-5E45J 24.7
GTEX-11TUW-1826-SM-5BC5D 24.6
GTEX-XV7Q-2326-SM-4BRVZ 24.5
GTEX-12BJ1-1826-SM-5HL9N 24.3
GTEX-11DXZ-1926-SM-5GZZL 23.7
GTEX-12KS4-0126-SM-5Q5A5 23.6
GTEX-ZA64-1526-SM-5CVMD 23.4
GTEX-QEL4-2126-SM-447AE 23.3
GTEX-145MN-1926-SM-5SIAI 23.0
GTEX-1399U-1826-SM-5PNZ1 22.9
GTEX-145MO-0826-SM-5NQBL 22.8
GTEX-YJ8O-2226-SM-5IFHW 22.8
GTEX-S4UY-0726-SM-4AD6X 22.6
GTEX-QEG5-0726-SM-4R1JQ 22.2
GTEX-11EQ9-1826-SM-5Q5AJ 22.1
GTEX-144GM-0926-SM-5O994 22.1
GTEX-TKQ1-0226-SM-33HB5 22.1
GTEX-ZDTT-2126-SM-5S2OJ 22.1
GTEX-XBED-1626-SM-47JYN 21.8
GTEX-ZV6S-1826-SM-5NQ8D 21.8
GTEX-133LE-1726-SM-5K7VQ 21.7
GTEX-14E6E-1326-SM-5S2NR 21.6
GTEX-S32W-2026-SM-4AD6E 21.6
GTEX-11P81-1926-SM-5BC53 21.3
GTEX-146FH-0826-SM-5SI8T 21.2
GTEX-12WSN-1326-SM-5GCNT 20.9
GTEX-13O61-1826-SM-5KM4I 20.9
GTEX-U8XE-0826-SM-4E3J1 20.7
GTEX-XQ8I-2426-SM-4WAXY 20.7
GTEX-Y9LG-1426-SM-5IFJZ 20.7
GTEX-YEC3-1026-SM-5IFI5 20.6
GTEX-ZU9S-1926-SM-5NQBP 20.6
GTEX-13OW8-0226-SM-5K7UP 20.5
GTEX-RUSQ-2026-SM-4GIAK 20.5
GTEX-Y5V5-2126-SM-4WWFO 20.5
GTEX-YFCO-1826-SM-4W1YH 20.3
GTEX-145LT-0726-SM-5S2VM 20.1
GTEX-132Q8-1426-SM-5EGK7 20.0
GTEX-11LCK-2426-SM-5HL5F 19.9
GTEX-SIU7-1626-SM-4BRUK 19.9
GTEX-T5JC-2126-SM-32PMO 19.8
GTEX-ZLV1-1426-SM-4WWES 19.8
GTEX-QVJO-1826-SM-447C9 19.7
GTEX-11EMC-2026-SM-5A5JV 19.6
GTEX-12ZZX-1126-SM-5EGKB 19.6
GTEX-1192X-2326-SM-5987X 19.5
GTEX-11O72-2126-SM-5N9FO 19.4
GTEX-WXYG-2226-SM-4E3IM 19.4
GTEX-ZTTD-1026-SM-51MRD 19.4
GTEX-11ONC-2126-SM-5HL6E 19.3
GTEX-1313W-0826-SM-5EQ4T 19.3
GTEX-1122O-1226-SM-5H113 19.2
GTEX-144GL-2026-SM-5LU3O 19.1
GTEX-139T8-0826-SM-5L3DE 19.0
GTEX-WFON-1826-SM-3GILG 18.9
GTEX-12WSM-1726-SM-5BC6J 18.8
GTEX-Y8E4-1626-SM-5S2MW 18.8
GTEX-11DXW-0626-SM-5N9ER 18.7
GTEX-12WSK-2226-SM-5GCO5 18.7
GTEX-11DZ1-0326-SM-5N9BN 18.6
GTEX-13FHO-0826-SM-5L3E8 18.6
GTEX-13113-1726-SM-5GCOO 18.5
GTEX-WRHU-0326-SM-3MJFY 18.5
GTEX-ZAJG-0626-SM-5HL8X 18.5
GTEX-11ZUS-0826-SM-5FQUY 18.4
GTEX-ZC5H-2626-SM-5J2MG 18.4
GTEX-ZTX8-1226-SM-4YCE9 18.4
GTEX-ZVE2-1226-SM-5NQ8R 18.4
GTEX-139TU-0626-SM-5KM3X 18.3
GTEX-X261-0626-SM-3NMD9 18.2
GTEX-Y8LW-1626-SM-5IFHX 18.2
GTEX-T6MN-0726-SM-32PML 18.1
GTEX-13CF2-2026-SM-5K7VI 18.0
GTEX-RWS6-1926-SM-47JXY 18.0
GTEX-13NZ9-1026-SM-5MR5K 17.9
GTEX-14ABY-2126-SM-5QGQZ 17.9
GTEX-WYJK-1326-SM-3NB2T 17.8
GTEX-X4EP-2926-SM-3P5YQ 17.8
GTEX-ZVTK-0326-SM-51MRR 17.8
GTEX-13FTY-2226-SM-5J1ND 17.7
GTEX-13S86-1226-SM-5S2OA 17.7
GTEX-14AS3-1626-SM-5S2OY 17.7
GTEX-XUW1-2326-SM-4BOO5 17.7
GTEX-YFC4-1426-SM-5IFJG 17.7
GTEX-1117F-2826-SM-5GZXL 17.6
GTEX-13N1W-0626-SM-5MR4U 17.6
GTEX-13NZB-2126-SM-5MR4Y 17.6
GTEX-147F4-2826-SM-5NQBN 17.6
GTEX-RU72-0626-SM-46MUI 17.6
GTEX-XYKS-1326-SM-4BRUN 17.6
GTEX-ZVT4-1026-SM-57WC4 17.6
GTEX-ZYW4-0826-SM-5GIDG 17.6
GTEX-11EI6-0626-SM-5985T 17.5
GTEX-11WQK-2426-SM-5GU5C 17.5
GTEX-TMMY-0726-SM-33HBE 17.5
GTEX-Y3I4-1526-SM-4TT7K 17.5
GTEX-Y3IK-2326-SM-4WWDT 17.5
GTEX-11P7K-0726-SM-5EGKX 17.4
GTEX-QDT8-0626-SM-48TYW 17.4
GTEX-ZXES-0826-SM-5E43C 17.4
GTEX-13NZ8-0126-SM-5IJCT 17.3
GTEX-131YS-0626-SM-5EGKL 17.2
GTEX-UPK5-2326-SM-3P5Z8 17.2
GTEX-11GS4-2126-SM-5A5KR 17.1
GTEX-11NSD-0926-SM-5N9DR 17.1
GTEX-13PVQ-1026-SM-5KM3M 17.1
GTEX-R55F-1726-SM-2TF4R 17.1
GTEX-ZEX8-2226-SM-57WC6 17.1
GTEX-13PL6-2926-SM-5L3I2 17.0
GTEX-ZUA1-1526-SM-59HLS 17.0
GTEX-S33H-0326-SM-4AD6N 16.9
GTEX-XUJ4-1926-SM-4BOOV 16.9
GTEX-11EM3-1326-SM-5N9C6 16.8
GTEX-1314G-1226-SM-5BC6D 16.8
GTEX-131XW-0726-SM-5EGK3 16.8
GTEX-13OW5-2226-SM-5L3HC 16.8
GTEX-U3ZN-1926-SM-4DXSG 16.8
GTEX-11DXY-2326-SM-5GICW 16.7
GTEX-WYVS-1726-SM-3NMAY 16.7
GTEX-Y5LM-1726-SM-4VDSX 16.7
GTEX-ZV7C-1826-SM-5NQ83 16.7
GTEX-TKQ2-1826-SM-33HB2 16.6
GTEX-ZYFC-0826-SM-5E44K 16.6
GTEX-1269C-2426-SM-5FQSN 16.5
GTEX-13N11-1726-SM-5J1OJ 16.5
GTEX-R3RS-0626-SM-48FE1 16.5
GTEX-132NY-0826-SM-5K7Y7 16.2
GTEX-Q2AG-0326-SM-48U1O 16.2
GTEX-WI4N-1426-SM-3LK7H 16.2
GTEX-WYBS-0926-SM-3NM94 16.2
GTEX-ZY6K-1626-SM-5GZWV 16.2
GTEX-XOT4-0726-SM-4GIAW 16.1
GTEX-11WQC-1726-SM-5GU4W 16.0
GTEX-13D11-1026-SM-5IJFB 15.9
GTEX-11PRG-0826-SM-5EQ6A 15.8
GTEX-TML8-1226-SM-32QON 15.8
GTEX-VUSG-2226-SM-4KKZO 15.8
GTEX-S341-1526-SM-4AD6K 15.7
GTEX-ZVZQ-0826-SM-51MRF 15.7
GTEX-111YS-1926-SM-5GICC 15.6
GTEX-U412-1826-SM-4DXTJ 15.6
GTEX-13O3O-0826-SM-5K7WE 15.5
GTEX-T2IS-1526-SM-32QPR 15.4
GTEX-X15G-1626-SM-3NMB3 15.4
GTEX-S4P3-1326-SM-4AD6V 15.3
GTEX-U3ZH-1426-SM-4DXSR 15.3
GTEX-Y111-2026-SM-4SOJA 15.3
GTEX-UJHI-1426-SM-3DB9C 15.2
GTEX-ZVT2-1826-SM-5NQ8W 15.1
GTEX-13O3P-0826-SM-5L3DH 15.0
GTEX-13QIC-2326-SM-5LU5N 15.0
GTEX-VJWN-0726-SM-3GIJ8 15.0
GTEX-XMD1-0826-SM-4AT52 14.9
GTEX-ZF2S-2026-SM-5E461 14.6
GTEX-ZZPU-0626-SM-5E43T 14.6
GTEX-12WSB-0626-SM-59HJO 14.4
GTEX-ZF29-1926-SM-5S2P1 14.4
GTEX-T2YK-2226-SM-32QPT 14.3
GTEX-117XS-1926-SM-5GICO 14.2
GTEX-S7SE-0826-SM-4AT4D 14.2
GTEX-XMD2-0926-SM-4WWEF 14.2
GTEX-11OF3-1926-SM-59889 13.9
GTEX-WOFL-0826-SM-3MJG1 13.8
GTEX-11NV4-2026-SM-5N9DG 13.6
GTEX-13W46-0826-SM-5LU3H 13.5
GTEX-ZF3C-2326-SM-5S2MZ 13.1
GTEX-ZWKS-2826-SM-5NQ74 13.0
GTEX-11GSO-1926-SM-5A5K3 12.9
GTEX-13O3Q-2226-SM-5KM4O 12.9
GTEX-W5X1-2326-SM-3GIL6 12.6
GTEX-14753-2426-SM-5LU8U 11.5
Show all

BREAST - FANTOM5 CAGE

Average Tags Per Million

41.6

FANTOM5 sample id

Sample description

Tags Per Million

Breast
Tags Per Million: 41.6
FF:10080-102A8 77 years, female 41.6

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.