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Gene name

Class

Subclass

Chromosome

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In atlas

Reliability

Reliability

Reliability

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Validation

Method

Validation

Method

Validation

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Searches

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Expression

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Specificity

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Detectable

Cell line

Detectable

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PDHA1
  • TISSUE

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TISSUE ATLAS PRIMARY DATA

GENE/PROTEIN

Antibody validation


Dictionary


Tissue proteome

GENERAL INFORMATION

Gene name

PDHA1

Gene description

Pyruvate dehydrogenase (lipoamide) alpha 1

Protein class

Citric acid cycle related proteins
Disease related genes
Enzymes
Potential drug targets
Predicted intracellular proteins
Predicted secreted proteins

Predicted localization

Intracellular,Secreted

Number of transcripts

9
SHOW MORE

HUMAN PROTEIN ATLAS INFORMATION

RNA tissue category

HPA:Expressed in all
GTEx:Expressed in all
FANTOM5:Expressed in all

Protein evidence

Evidence at protein level

Protein expression

Granular cytoplasmic expression in most cell types.

DATA RELIABILITY

Data reliability
description

Antibody staining mainly consistent with RNA expression data. Caution, targets protein from more than one gene.

Reliability score

Approved based on 3 antibodies.
HPA047487 , HPA047864 , HPA063053
SHOW MORE

RNA AND PROTEIN EXPRESSION SUMMARY

RNA expression (TPM) Protein expression (score)
Brain
Cerebral cortex
Hippocampus
N/A
Caudate
N/A
Cerebellum
N/A
Endocrine tissues
Thyroid gland
Parathyroid gland
Adrenal gland
Bone marrow & immune system
Appendix
Bone marrow
Lymph node
Tonsil
Spleen
Muscle tissues
Heart muscle
Skeletal muscle
Smooth muscle
Lung
Nasopharynx
N/A
Bronchus
N/A
Lung
Liver & gallbladder
Liver
Gallbladder
Pancreas
Pancreas
Gastrointestinal tract
Oral mucosa
N/A
Salivary gland
Esophagus
Stomach
Duodenum
Small intestine
Colon
Rectum
Kidney & urinary bladder
Kidney
Urinary bladder
Male tissues
Testis
Epididymis
Prostate
Seminal vesicle
Female tissues
Breast
Vagina
N/A
Cervix, uterine
Endometrium
Fallopian tube
Ovary
Placenta
Adipose & soft tissue
Adipose tissue
Soft tissue
N/A
Skin
Skin
Cerebral cortex

Lymph node

Heart muscle

Liver

Colon

Kidney

Testis

PROTEIN EXPRESSION OVERVIEW

Organ
Expression
Alphabetical

RNA EXPRESSION OVERVIEW

HPA dataset
Organ
Expression
Alphabetical
RNA tissue category: Expressed in all
GTEx dataset
Organ
Expression
Alphabetical
RNA tissue category: Expressed in all
FANTOM5 dataset
Organ
Expression
Alphabetical
RNA tissue category: Expressed in all

GENE INFORMATION

Gene name

PDHA1 (HGNC Symbol)

Synonyms

PDHA

Description

Pyruvate dehydrogenase (lipoamide) alpha 1 (HGNC Symbol)

Entrez gene summary

The pyruvate dehydrogenase (PDH) complex is a nuclear-encoded mitochondrial multienzyme complex that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2), and provides the primary link between glycolysis and the tricarboxylic acid (TCA) cycle. The PDH complex is composed of multiple copies of three enzymatic components: pyruvate dehydrogenase (E1), dihydrolipoamide acetyltransferase (E2) and lipoamide dehydrogenase (E3). The E1 enzyme is a heterotetramer of two alpha and two beta subunits. This gene encodes the E1 alpha 1 subunit containing the E1 active site, and plays a key role in the function of the PDH complex. Mutations in this gene are associated with pyruvate dehydrogenase E1-alpha deficiency and X-linked Leigh syndrome. Alternatively spliced transcript variants encoding different isoforms have been found for this gene.[provided by RefSeq, Mar 2010]

Chromosome

X

Cytoband

p22.12

Chromosome location (bp)

19343893 - 19361705

Protein evidence

Evidence at protein level (all genes)

Ensembl

ENSG00000131828 (version 83.38)

Entrez gene

5160

UniProt

P08559 (UniProt - Evidence at protein level)

neXtProt

NX_P08559

Antibodypedia

PDHA1 antibodies

PROTEIN BROWSER

PDHA1-001
PDHA1-002
PDHA1-004
PDHA1-008
PDHA1-009
PDHA1-010
PDHA1-201
PDHA1-202
PDHA1-203

PROTEIN INFORMATION

Splice variant

UniProt

Protein class

Gene ontology

Length & mass

Signal peptide
(predicted)

Transmembrane regions
(predicted)

PDHA1-001
ENSP00000369133
ENST00000379805
Q5JPU0 [Direct mapping]
Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial
Show all
   Phobius predicted secreted proteins
Predicted intracellular proteins
Citric acid cycle related proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0008152 [metabolic process]
GO:0016624 [oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor]
GO:0055114 [oxidation-reduction process]
Show all
180 aa
19.8 kDa
No 0
PDHA1-002
ENSP00000369132
ENST00000379804
Q5JPU3 [Direct mapping]
Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial
Show all
Predicted intracellular proteins
Citric acid cycle related proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0008152 [metabolic process]
GO:0016624 [oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor]
GO:0055114 [oxidation-reduction process]
Show all
109 aa
12.6 kDa
No 0
PDHA1-004
ENSP00000394382
ENST00000422285
P08559 [Direct mapping]
Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial
A0A024RBX9 [Target identity:100%; Query identity:100%]
Pyruvate dehydrogenase E1 component subunit alpha
Show all
Enzymes
   ENZYME proteins
   Oxidoreductases
   SPOCTOPUS predicted membrane proteins
   Phobius predicted secreted proteins
Predicted intracellular proteins
Citric acid cycle related proteins
Disease related genes
Potential drug targets
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0004738 [pyruvate dehydrogenase activity]
GO:0004739 [pyruvate dehydrogenase (acetyl-transferring) activity]
GO:0005634 [nucleus]
GO:0005739 [mitochondrion]
GO:0005759 [mitochondrial matrix]
GO:0006006 [glucose metabolic process]
GO:0006086 [acetyl-CoA biosynthetic process from pyruvate]
GO:0006090 [pyruvate metabolic process]
GO:0006099 [tricarboxylic acid cycle]
GO:0008152 [metabolic process]
GO:0010510 [regulation of acetyl-CoA biosynthetic process from pyruvate]
GO:0016624 [oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor]
GO:0043231 [intracellular membrane-bounded organelle]
GO:0044237 [cellular metabolic process]
GO:0044281 [small molecule metabolic process]
GO:0045254 [pyruvate dehydrogenase complex]
Show all
390 aa
43.3 kDa
No 0
PDHA1-008
ENSP00000348062
ENST00000355808
Q5JPT9 [Direct mapping]
Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial
Show all
   SPOCTOPUS predicted membrane proteins
   Phobius predicted secreted proteins
Predicted intracellular proteins
Citric acid cycle related proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0008152 [metabolic process]
GO:0016624 [oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor]
GO:0055114 [oxidation-reduction process]
Show all
204 aa
22.3 kDa
No 0
PDHA1-009
ENSP00000406473
ENST00000423505
Q5JPU1 [Direct mapping]
Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial
Show all
Predicted secreted proteins
   Secreted proteins predicted by MDSEC
   Phobius predicted secreted proteins
   SPOCTOPUS predicted secreted proteins
Citric acid cycle related proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0008152 [metabolic process]
GO:0016624 [oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor]
GO:0055114 [oxidation-reduction process]
Show all
205 aa
22.8 kDa
Yes 0
PDHA1-010
ENSP00000404616
ENST00000417819
Q5JPU2 [Direct mapping]
Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial
Show all
Predicted secreted proteins
   Secreted proteins predicted by MDSEC
   Phobius predicted secreted proteins
   SPOCTOPUS predicted secreted proteins
Citric acid cycle related proteins
Protein evidence (Ezkurdia et al 2014)
Show all
121 aa
13.8 kDa
Yes 0
PDHA1-201
ENSP00000369134
ENST00000379806
P08559 [Direct mapping]
Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial
Show all
Enzymes
   ENZYME proteins
   Oxidoreductases
   SPOCTOPUS predicted membrane proteins
Predicted secreted proteins
   Secreted proteins predicted by MDSEC
   Phobius predicted secreted proteins
   SPOCTOPUS predicted secreted proteins
Citric acid cycle related proteins
Disease related genes
Potential drug targets
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0004738 [pyruvate dehydrogenase activity]
GO:0004739 [pyruvate dehydrogenase (acetyl-transferring) activity]
GO:0005634 [nucleus]
GO:0005739 [mitochondrion]
GO:0005759 [mitochondrial matrix]
GO:0006006 [glucose metabolic process]
GO:0006086 [acetyl-CoA biosynthetic process from pyruvate]
GO:0006090 [pyruvate metabolic process]
GO:0006099 [tricarboxylic acid cycle]
GO:0008152 [metabolic process]
GO:0010510 [regulation of acetyl-CoA biosynthetic process from pyruvate]
GO:0016624 [oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor]
GO:0034604 [pyruvate dehydrogenase (NAD+) activity]
GO:0043209 [myelin sheath]
GO:0043231 [intracellular membrane-bounded organelle]
GO:0044237 [cellular metabolic process]
GO:0044281 [small molecule metabolic process]
GO:0045254 [pyruvate dehydrogenase complex]
GO:0061732 [mitochondrial acetyl-CoA biosynthetic process from pyruvate]
Show all
428 aa
47.6 kDa
Yes 0
PDHA1-202
ENSP00000440761
ENST00000540249
P08559 [Direct mapping]
Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial
Show all
Enzymes
   ENZYME proteins
   Oxidoreductases
   Phobius predicted secreted proteins
Predicted intracellular proteins
Citric acid cycle related proteins
Disease related genes
Potential drug targets
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0004738 [pyruvate dehydrogenase activity]
GO:0004739 [pyruvate dehydrogenase (acetyl-transferring) activity]
GO:0005634 [nucleus]
GO:0005739 [mitochondrion]
GO:0005759 [mitochondrial matrix]
GO:0006006 [glucose metabolic process]
GO:0006086 [acetyl-CoA biosynthetic process from pyruvate]
GO:0006090 [pyruvate metabolic process]
GO:0006099 [tricarboxylic acid cycle]
GO:0008152 [metabolic process]
GO:0010510 [regulation of acetyl-CoA biosynthetic process from pyruvate]
GO:0016624 [oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor]
GO:0044237 [cellular metabolic process]
GO:0044281 [small molecule metabolic process]
GO:0045254 [pyruvate dehydrogenase complex]
Show all
359 aa
40.2 kDa
No 0
PDHA1-203
ENSP00000438550
ENST00000545074
P08559 [Direct mapping]
Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial
Show all
Enzymes
   ENZYME proteins
   Oxidoreductases
   SPOCTOPUS predicted membrane proteins
   Phobius predicted secreted proteins
Predicted intracellular proteins
Citric acid cycle related proteins
Disease related genes
Potential drug targets
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0004738 [pyruvate dehydrogenase activity]
GO:0004739 [pyruvate dehydrogenase (acetyl-transferring) activity]
GO:0005634 [nucleus]
GO:0005739 [mitochondrion]
GO:0005759 [mitochondrial matrix]
GO:0006006 [glucose metabolic process]
GO:0006086 [acetyl-CoA biosynthetic process from pyruvate]
GO:0006090 [pyruvate metabolic process]
GO:0006099 [tricarboxylic acid cycle]
GO:0008152 [metabolic process]
GO:0010510 [regulation of acetyl-CoA biosynthetic process from pyruvate]
GO:0016624 [oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor]
GO:0043231 [intracellular membrane-bounded organelle]
GO:0044237 [cellular metabolic process]
GO:0044281 [small molecule metabolic process]
GO:0045254 [pyruvate dehydrogenase complex]
Show all
397 aa
44.1 kDa
No 0

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The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.