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PDHA1
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TISSUE ATLAS PRIMARY DATA CEREBRAL CORTEX

GENE/PROTEIN

Antibody validation


Dictionary

Cerebral cortex

Tissue proteome

Brain
Extended brain samples

CEREBRAL CORTEX - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:82.2TPM
GTEx:17.9RPKM

CEREBRAL CORTEX - Annotated protein expression

Annotated protein
expression

Endothelial cells:Low
Glial cells:Low
Neuronal cells:High
Neuropil:Medium
 

Antibody staining

Antibody HPA047487

 

Antibody HPA047864

 

Antibody HPA063053

 

Endothelial cells

Not detected   Not detected   Low  

Glial cells

Not detected   Not detected   Low  

Neuronal cells

Not detected   Low   High  

Neuropil

Not detected   Low   Medium  
     
     
     

CEREBRAL CORTEX - HPA RNA-seq

Average TPM

82.2

N/A Male, age 5
Sample 1
TPM: 82.0
overview Female, age 40
Sample 2
TPM: 74.2
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65
overview Male, age 70
Sample 3
TPM: 90.3
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM

17.9

GTEx sample id

RPKM

 

Brain - Cortex

Brain - Cortex
RPKM: 16.9
Samples: 114

Max RPKM: 23.1
Min RPKM: 9.1
Std RPKM: 3.1
Median RPKM: 17.1
GTEX-11GSO-2926-SM-5HL73 23.1
GTEX-ZUA1-3026-SM-59HJC 22.6
GTEX-12WSC-3026-SM-5GCNF 22.5
GTEX-14BMV-3026-SM-5S2PQ 22.3
GTEX-YFC4-3126-SM-5PNV6 21.7
GTEX-14ASI-3026-SM-5S2PN 21.6
GTEX-11DXY-3226-SM-5GIDE 21.5
GTEX-11NUK-2926-SM-5A5MD 21.4
GTEX-145MH-3026-SM-5Q5DZ 21.1
GTEX-13OVH-3026-SM-5MR4N 21.0
GTEX-WHSE-3026-SM-3P5ZH 20.9
GTEX-WVLH-3026-SM-3MJG9 20.9
GTEX-11OC5-0726-SM-5P9JK 20.8
GTEX-13FXS-3126-SM-5J2NN 20.8
GTEX-T2IS-3026-SM-32QPM 20.6
GTEX-ZYFD-3026-SM-5E44C 20.5
GTEX-13O3Q-2926-SM-5KM45 20.4
GTEX-ZAK1-3026-SM-5S2MJ 20.1
GTEX-13NYC-2826-SM-5K7WR 19.9
GTEX-13OW6-3026-SM-5J2MI 19.9
GTEX-117XS-3026-SM-5N9CA 19.8
GTEX-13NYS-3126-SM-5KLYV 19.8
GTEX-PVOW-2526-SM-2XCF7 19.8
GTEX-WZTO-2926-SM-3NM9I 19.8
GTEX-XLM4-3026-SM-4AT6L 19.7
GTEX-T5JC-2426-SM-3NMDB 19.6
GTEX-13VXU-2926-SM-5LU5C 19.5
GTEX-WL46-2926-SM-3LK82 19.5
GTEX-11ZUS-2926-SM-5FQSL 19.4
GTEX-13FHO-3026-SM-5J1O9 19.4
GTEX-144GL-3026-SM-5Q5CW 19.1
GTEX-XOTO-3026-SM-4B65M 19.1
GTEX-11PRG-2926-SM-5987A 18.9
GTEX-1313W-3126-SM-5LZUI 18.9
GTEX-Q2AG-2926-SM-2HMJ3 18.9
GTEX-1192X-3126-SM-5N9BY 18.8
GTEX-12ZZX-2926-SM-5GCOQ 18.8
GTEX-12ZZY-3026-SM-5GCOU 18.8
GTEX-1399T-3026-SM-5KLZC 18.8
GTEX-13O3O-3126-SM-5KM3H 18.8
GTEX-WWYW-3126-SM-3NB39 18.7
GTEX-X4XX-3026-SM-3NMB2 18.6
GTEX-QVJO-1426-SM-2S1QY 18.5
GTEX-RNOR-2326-SM-2TF4I 18.4
GTEX-T6MN-2626-SM-32PMQ 18.4
GTEX-145MF-2726-SM-5O995 18.0
GTEX-111FC-3126-SM-5GZZ2 17.9
GTEX-1128S-2726-SM-5H12C 17.8
GTEX-14A5I-2926-SM-5Q5CQ 17.8
GTEX-145LS-3126-SM-5Q5BY 17.7
GTEX-YJ89-3026-SM-5IFJI 17.7
GTEX-131YS-3126-SM-5KLYT 17.6
GTEX-UTHO-3026-SM-3GAFB 17.6
GTEX-Y8DK-0826-SM-4TT3T 17.6
GTEX-12126-1026-SM-5P9JJ 17.4
GTEX-11OF3-2926-SM-5HL78 17.3
GTEX-11DXW-1126-SM-5H12Q 17.1
GTEX-13OW8-2826-SM-5L3GC 17.1
GTEX-13SLX-3126-SM-5S2Q5 17.1
GTEX-ZVT3-3026-SM-5E43N 17.1
GTEX-X585-3026-SM-46MWF 17.0
GTEX-R55F-1326-SM-5S2V4 16.9
GTEX-11EMC-3226-SM-5EGKW 16.7
GTEX-13OVJ-2826-SM-5L3GW 16.7
GTEX-12ZZZ-3026-SM-5BC67 16.6
GTEX-132Q8-3026-SM-5PNVG 16.6
GTEX-11ONC-2926-SM-5P9JM 16.5
GTEX-ZE7O-3126-SM-5HL5X 16.4
GTEX-13FLW-1426-SM-5K7YE 16.1
GTEX-144FL-3026-SM-5O99C 16.1
GTEX-TSE9-3026-SM-3DB76 16.1
GTEX-13X6J-3026-SM-5Q5CU 16.0
GTEX-RU72-3026-SM-5SI7Y 16.0
GTEX-OXRN-2426-SM-2I5EQ 15.7
GTEX-12ZZW-2926-SM-5LZUP 15.6
GTEX-13NYB-3026-SM-5IJD7 15.5
GTEX-NPJ8-1526-SM-2D7VU 15.5
GTEX-11GS4-3126-SM-5A5LH 15.4
GTEX-13X6K-2926-SM-5Q5D5 15.1
GTEX-12WSH-3026-SM-5CVNI 15.0
GTEX-145MG-3026-SM-5RQJA 14.9
GTEX-131XW-3126-SM-5LZUC 14.6
GTEX-Y111-2726-SM-4TT3N 14.6
GTEX-11TTK-2926-SM-5PNYP 14.5
GTEX-QMR6-1426-SM-32PLA 14.3
GTEX-QVUS-2826-SM-3GADB 14.3
GTEX-11O72-2926-SM-5BC4V 14.2
GTEX-13JUV-2926-SM-5LZX7 14.2
GTEX-13JVG-3126-SM-5L3FH 14.2
GTEX-Z93S-2926-SM-57WB9 14.2
GTEX-13FHP-3026-SM-5IJBS 14.1
GTEX-N7MT-1126-SM-5SI7V 14.0
GTEX-QDT8-2926-SM-32PKC 14.0
GTEX-ZAJG-3126-SM-5HL9J 13.9
GTEX-13OW7-3026-SM-5L3GY 13.8
GTEX-11EI6-3026-SM-5GZZO 13.7
GTEX-139T8-1026-SM-5J2MC 13.7
GTEX-13G51-3026-SM-5IJB8 13.5
GTEX-13QIC-2926-SM-5J2NF 13.5
GTEX-13S7M-3126-SM-5RQJQ 13.4
GTEX-12WSD-3126-SM-5HL7P 13.2
GTEX-11WQK-3026-SM-5EQL6 13.1
GTEX-11GSP-3226-SM-5986O 12.8
GTEX-13PVQ-3026-SM-5SI93 12.6
GTEX-13PL6-3126-SM-5LUAR 12.1
GTEX-1445S-3026-SM-5O9BR 12.1
GTEX-11NV4-2126-SM-5N9DS 11.8
GTEX-147GR-3026-SM-5S2ML 11.5
GTEX-NPJ7-2726-SM-2I3FT 11.0
GTEX-1117F-3226-SM-5N9CT 10.5
GTEX-PWO3-0926-SM-2I5EY 10.5
GTEX-13IVO-2926-SM-5L3CZ 10.0
GTEX-12WSA-2926-SM-5EQ4D 9.1
GTEX-ZZPT-3026-SM-5GZXH 9.1
Show all
 

Brain - Frontal Cortex (BA9)

Brain - Frontal Cortex (BA9)
RPKM: 18.9
Samples: 108

Max RPKM: 28.7
Min RPKM: 7.4
Std RPKM: 4.9
Median RPKM: 19.7
GTEX-13QJC-0011-R10a-SM-5SI63 28.7
GTEX-13RTJ-0011-R10b-SM-5O9CW 28.1
GTEX-145MH-0011-R10b-SM-5PNUK 26.5
GTEX-12WSE-0011-R10b-SM-5P9JV 26.2
GTEX-13X6K-0011-R10a-SM-5P9JR 26.0
GTEX-T5JC-0011-R10A-SM-32PM2 25.9
GTEX-13O3Q-0011-R10b-SM-5KM39 25.8
GTEX-Q2AG-0011-R10A-SM-2HMLA 25.6
GTEX-12WSC-0011-R10a-SM-5GU57 25.4
GTEX-13FHO-0011-R10b-SM-5J2MM 25.0
GTEX-12ZZY-0011-R10b-SM-5HL7W 24.9
GTEX-T6MN-0011-R10A-SM-32QP7 24.7
GTEX-WVLH-0011-R10A-SM-3MJFM 24.6
GTEX-ZF28-0011-R10a-SM-4WWEH 24.5
GTEX-14ASI-0011-R10b-SM-5S2VZ 24.4
GTEX-12WSM-0011-R10a-SM-5DUWV 24.3
GTEX-YFC4-0011-R10a-SM-4SOK5 24.3
GTEX-Y8DK-0011-R10A-SM-4SOK1 24.0
GTEX-12ZZX-0011-R10b-SM-5DUWK 23.8
GTEX-1313W-0011-R10b-SM-5DUXA 23.7
GTEX-X585-0011-R10A-SM-46MUY 23.6
GTEX-131XH-0011-R10a-SM-5EGLJ 23.3
GTEX-11H98-0011-R10b-SM-5NQ98 23.2
GTEX-S7SE-0011-R10A-SM-2XCDF 23.1
GTEX-NL3H-0011-R10A-SM-2I3E9 23.0
GTEX-WL46-0011-R10A-SM-3MJFQ 22.9
GTEX-131YS-0011-R10b-SM-5EQ5N 22.8
GTEX-N7MS-0011-R10A-SM-2HMJK 22.8
GTEX-12WSF-0011-R10a-SM-5LZVH 22.6
GTEX-N7MT-0011-R10A-SM-2I3E1 22.6
GTEX-WZTO-0011-R10B-SM-4E3KB 22.6
GTEX-XLM4-0011-R10A-SM-4AT5P 22.6
GTEX-QVJO-0011-R10A-SM-2S1QJ 22.2
GTEX-X4XX-0011-R10B-SM-46MWO 21.9
GTEX-13NYS-0011-R10a-SM-5MR4S 21.7
GTEX-145MG-0011-R10a-SM-5PNWG 21.6
GTEX-13O3O-0011-R10a-SM-5LUA9 21.4
GTEX-NPJ8-0011-R10A-SM-2YUMO 21.4
GTEX-147GR-0011-R10b-SM-5S2UM 21.3
GTEX-WWYW-0011-R10A-SM-3NB35 21.2
GTEX-13S7M-0011-R10b-SM-5PNZB 21.1
GTEX-14BIN-0011-R10a-SM-5S2UA 21.0
GTEX-12ZZZ-0011-R10a-SM-5P9HC 20.9
GTEX-13CZV-0011-R10b-SM-5LZYD 20.9
GTEX-13X6J-0011-R10b-SM-5PNWA 20.9
GTEX-13OVL-0011-R10a-SM-5L3GS 20.6
GTEX-13X6I-0011-R10a-SM-5PNWI 20.5
GTEX-145LS-0011-R10a-SM-5PNUQ 20.4
GTEX-13FXS-0011-R10a-SM-5J2MA 20.2
GTEX-13NYB-0011-R10a-SM-5KM43 20.2
GTEX-14BIL-0011-R10a-SM-5SI75 20.2
GTEX-13OW7-0011-R10a-SM-5L3H3 20.1
GTEX-132Q8-0011-R10b-SM-5DUWZ 20.0
GTEX-13QIC-0011-R10a-SM-5O9C7 19.8
GTEX-YJ89-0011-R10a-SM-4SOK9 19.7
GTEX-NPJ7-0011-R10A-SM-2I3E5 19.4
GTEX-13OW8-0011-R10a-SM-5L3H6 19.3
GTEX-ZUA1-0011-R10a-SM-51MT6 19.3
GTEX-ZVZQ-0011-R10b-SM-51MRT 19.3
GTEX-13N1W-0011-R10b-SM-5MR4H 19.2
GTEX-13OVJ-0011-R10b-SM-5L3HT 19.1
GTEX-ZAB4-0011-R10a-SM-4SOKH 19.1
GTEX-13SLX-0011-R10a-SM-5P9HV 18.8
GTEX-QDT8-0011-R10A-SM-32PKG 18.8
GTEX-12126-0011-R10b-SM-5BC6T 18.4
GTEX-QVUS-0011-R10A-SM-3GIK3 18.1
GTEX-X4EP-0011-R10B-SM-4QASJ 18.0
GTEX-13OW6-0011-R10a-SM-5L3HE 17.4
GTEX-ZDXO-0011-R10a-SM-4WWD8 17.2
GTEX-13G51-0011-R10b-SM-5LZYF 17.0
GTEX-13JUV-0011-R10b-SM-5LZXR 16.9
GTEX-147F4-0011-R10b-SM-5S2WC 16.8
GTEX-12WSH-0011-R10a-SM-5LZUS 16.6
GTEX-13FLW-0011-R10b-SM-5LZZF 16.6
GTEX-13N2G-0011-R10a-SM-5MR34 16.2
GTEX-Z93S-0011-R10a-SM-4RGNM 15.9
GTEX-11ZUS-0011-R10b-SM-5BC79 15.8
GTEX-TSE9-0011-R10A-SM-3DB7O 15.7
GTEX-145LU-0011-R10a-SM-5PNWJ 15.6
GTEX-ZVT3-0011-R10b-SM-57WB6 15.4
GTEX-13FLV-0011-R10b-SM-5LZZ2 15.3
GTEX-OXRN-0011-R10A-SM-2I5GC 15.3
GTEX-QMR6-0011-R10A-SM-32PKO 15.1
GTEX-11WQC-0011-R10a-SM-57WCT 14.9
GTEX-13FTZ-0011-R10b-SM-5KLZS 14.3
GTEX-12ZZW-0011-R10b-SM-5HL9X 14.1
GTEX-1445S-0011-R10a-SM-5PNWB 13.7
GTEX-RVPU-0011-R10A-SM-2XCAH 13.6
GTEX-13SLW-0011-R10a-SM-5S2UI 13.1
GTEX-NL4W-0011-R10A-SM-2I3DY 13.1
GTEX-ZXG5-0011-R10a-SM-57WDD 13.0
GTEX-13JVG-0011-R10b-SM-5KM2P 12.7
GTEX-X261-0011-R10B-SM-4E3JT 12.7
GTEX-11GSP-0011-R10a-SM-5NQ7J 12.4
GTEX-12WSD-0011-R10b-SM-5GU79 12.4
GTEX-XMD1-0011-R10A-SM-4AT4A 12.4
GTEX-139TS-0011-R10a-SM-5K7TU 12.2
GTEX-11WQK-0011-R10a-SM-5BC6R 11.1
GTEX-131XW-0011-R10a-SM-5DUVA 11.1
GTEX-P44H-0011-R10A-SM-2XCEK 11.1
GTEX-ZE7O-0011-R10a-SM-57WAZ 10.8
GTEX-1477Z-0011-R10b-SM-5S2RF 10.7
GTEX-14753-0011-R10b-SM-5S2WE 10.6
GTEX-ZV68-0011-R10a-SM-51MT7 10.5
GTEX-13NZA-0011-R10b-SM-5KM54 10.2
GTEX-12WSA-0011-R10b-SM-5P9ET 9.6
GTEX-OXRO-0011-R10A-SM-2I5EH 8.7
GTEX-13IVO-0011-R10a-SM-5LZY3 7.4
Show all

CEREBRAL CORTEX - FANTOM5 CAGE

No Fantom CAGE analysis found for this gene / tissue

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