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CNDP2
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TISSUE ATLAS PRIMARY DATA CAUDATE

GENE/PROTEIN

Antibody validation


Dictionary

Caudate

CAUDATE - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:33.0RPKM
FANTOM5:100.9Tags Per Million

CAUDATE - Annotated protein expression

Annotated protein
expression

Glial cells:Medium
Neuronal cells:Low
 

Antibody staining

Antibody HPA036898

 

Antibody HPA036899

 

Antibody CAB026196

 

Glial cells

Low   Medium   High  

Neuronal cells

Low   Not detected   Low  
     
     
     

CAUDATE - HPA RNA-seq

Pending HPA RNA-seq analysis


CAUDATE - GTEx RNA-seq

Average RPKM

33.0

GTEx sample id

RPKM

 

Brain - Caudate (basal ganglia)

Brain - Caudate (basal ganglia)
RPKM: 33.0
Samples: 117

Max RPKM: 51.4
Min RPKM: 17.1
Std RPKM: 7
Median RPKM: 31.9
GTEX-ZAB4-0011-R5a-SM-4SOKC 51.4
GTEX-11H98-0011-R5b-SM-57WCF 48.0
GTEX-X4XX-0011-R5A-SM-46MWN 47.4
GTEX-X585-0011-R5A-SM-46MVI 46.9
GTEX-12WSA-0011-R5b-SM-5GU5I 46.6
GTEX-13FLV-0011-R5a-SM-5LZWT 45.8
GTEX-13X6K-0011-R5b-SM-5PNUE 45.3
GTEX-13OVJ-0011-R5a-SM-5P9H7 44.7
GTEX-13NYB-0011-R5a-SM-5MR45 44.2
GTEX-RVPV-0011-R5A-SM-2TF69 43.8
GTEX-N7MS-0011-R5a-SM-2HMK8 43.5
GTEX-13X6I-0011-R5a-SM-5PNWW 42.5
GTEX-13NYS-0011-R5a-SM-5MR4D 42.3
GTEX-XMD1-0011-R5A-SM-4AT47 42.2
GTEX-132Q8-0011-R5a-SM-5IJDM 41.5
GTEX-Q2AG-0011-R5A-SM-2HMJH 41.5
GTEX-13RTJ-0011-R5a-SM-5P9HR 40.7
GTEX-T6MN-0011-R5A-SM-32QPD 40.7
GTEX-N7MT-0011-R5a-SM-2I3G6 40.6
GTEX-13FHO-0011-R5b-SM-5LZZ3 40.5
GTEX-13FXS-0011-R5b-SM-5LZYE 40.4
GTEX-NL3H-0011-R5a-SM-2I3GB 39.7
GTEX-NPJ8-0011-R5a-SM-2HMJY 39.5
GTEX-QMR6-0011-R5A-SM-32PKT 39.5
GTEX-R55E-0011-R5A-SM-2TC5N 39.4
GTEX-13SLW-0011-R5b-SM-5SI6Z 39.3
GTEX-12WSB-0011-R5b-SM-5GU67 39.2
GTEX-13OW8-0011-R5b-SM-5L3FQ 39.0
GTEX-13G51-0011-R5a-SM-5L3EB 38.9
GTEX-13N1W-0011-R5b-SM-5MR5Q 37.9
GTEX-13OVH-0011-R5b-SM-5KM4L 37.9
GTEX-QVJO-0011-R5A-SM-2S1QM 37.6
GTEX-13SLX-0011-R5a-SM-5O9BV 37.3
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 37.1
GTEX-WL46-0011-R5A-SM-3LK6V 37.0
GTEX-139T8-0011-R5b-SM-5J1MO 36.7
GTEX-13PVQ-0011-R5b-SM-5O9DI 36.7
GTEX-11NV4-0011-R5a-SM-5NQ88 36.4
GTEX-13JUV-0011-R5a-SM-5LZY5 36.4
GTEX-NL4W-0011-R5a-SM-2I3GD 35.9
GTEX-11GSP-0011-R5a-SM-57WBE 35.8
GTEX-131YS-0011-R5b-SM-5K7YB 35.0
GTEX-13OW6-0011-R5a-SM-5O9BK 34.9
GTEX-WWYW-0011-R5A-SM-3NB3E 34.9
GTEX-1313W-0011-R5b-SM-5L3EP 34.8
GTEX-ZUA1-0011-R5b-SM-51MTG 34.6
GTEX-13JVG-0011-R5a-SM-5MR4O 34.2
GTEX-PWO3-0011-R5A-SM-2I5EZ 34.2
GTEX-S7SE-0011-R5A-SM-2XCDA 33.9
GTEX-WZTO-0011-R5B-SM-3NMC5 33.9
GTEX-12ZZY-0011-R5a-SM-5EGL9 33.8
GTEX-13O3Q-0011-R5b-SM-5P9H4 33.7
GTEX-RU72-0011-R5A-SM-2TF6U 33.7
GTEX-WVLH-0011-R5A-SM-3MJFW 33.6
GTEX-XOTO-0011-R5A-SM-4B657 33.4
GTEX-P44H-0011-R5A-SM-2XCEX 32.9
GTEX-OHPN-0011-R5A-SM-2I5FF 32.7
GTEX-13FLW-0011-R5a-SM-5LZX6 32.6
GTEX-11OF3-0011-R5a-SM-57WB4 31.9
GTEX-X261-0011-R5A-SM-3NMB4 31.8
GTEX-YFC4-0011-R5a-SM-4RGLR 31.7
GTEX-144GO-0011-R5a-SM-5PNUR 31.1
GTEX-13O3O-0011-R5b-SM-5KM44 31.0
GTEX-12WSC-0011-R5b-SM-5CVNS 30.8
GTEX-139TT-0011-R5b-SM-5K7W8 30.8
GTEX-13OVL-0011-R5b-SM-5L3FU 30.8
GTEX-145LS-0011-R5a-SM-5SI65 30.7
GTEX-ZF28-0011-R5a-SM-4WWCZ 30.6
GTEX-13X6J-0011-R5b-SM-5PNWT 30.5
GTEX-1399T-0011-R5b-SM-5IJDK 30.4
GTEX-RVPU-0011-R5A-SM-2XCAD 30.3
GTEX-13VXU-0011-R5a-SM-5O9D7 30.2
GTEX-13FHP-0011-R5b-SM-5LZY2 30.1
GTEX-NPJ7-0011-R5a-SM-33HBK 30.1
GTEX-T5JC-0011-R5A-SM-32PLK 30.0
GTEX-12WSF-0011-R5a-SM-5HL8K 29.9
GTEX-1445S-0011-R5a-SM-5PNUS 29.9
GTEX-PVOW-0011-R5A-SM-32PL7 29.7
GTEX-13OW7-0011-R5b-SM-5O9DM 29.6
GTEX-WHSE-0011-R5A-SM-3P5ZO 29.6
GTEX-UTHO-0011-R5A-SM-3GIJD 29.3
GTEX-12WSD-0011-R5b-SM-5CVNG 28.9
GTEX-145MH-0011-R5a-SM-5P9JT 28.9
GTEX-14ABY-0011-R5b-SM-5SI7B 28.9
GTEX-Y8DK-0011-R5B-SM-4RTW6 28.9
GTEX-11WQC-0011-R5a-SM-5BC74 28.7
GTEX-ZE7O-0011-R5a-SM-57WBO 28.6
GTEX-14BIM-0011-R5b-SM-5S2RM 27.8
GTEX-12ZZW-0011-R5a-SM-5DUVN 27.7
GTEX-13OW5-0011-R5b-SM-5L3FR 27.7
GTEX-14BIN-0011-R5b-SM-5SI78 27.7
GTEX-13CZV-0011-R5a-SM-5K7XA 27.6
GTEX-12WSM-0011-R5a-SM-5EQ4Y 27.5
GTEX-139TS-0011-R5b-SM-5J2MZ 27.1
GTEX-ZVZQ-0011-R5b-SM-57WDC 26.9
GTEX-ZVT3-0011-R5a-SM-51MSI 26.8
GTEX-13PLJ-0011-R5a-SM-5O9BG 26.4
GTEX-T2IS-0011-R5A-SM-32QP4 26.2
GTEX-13S7M-0011-R5b-SM-5P9HS 25.8
GTEX-ZXG5-0011-R5b-SM-57WBN 25.8
GTEX-Z93S-0011-R5b-SM-4RGNI 25.5
GTEX-TSE9-0011-R5A-SM-3DB7J 25.3
GTEX-12ZZX-0011-R5a-SM-5HL89 25.2
GTEX-11UD1-0011-R5b-SM-5P9FP 24.5
GTEX-13112-0011-R5b-SM-5DUV8 24.5
GTEX-144GL-0011-R5b-SM-5PNUJ 24.4
GTEX-ZV68-0011-R5a-SM-4YCDW 24.4
GTEX-13CF2-0011-R5a-SM-5LZWS 24.1
GTEX-OXRN-0011-R5A-SM-2I5EF 23.6
GTEX-ZE9C-0011-R5a-SM-5EGLO 23.5
GTEX-1477Z-0011-R5b-SM-5PNUO 22.3
GTEX-YJ89-0011-R5a-SM-4V6GM 21.7
GTEX-13CIG-0011-R5b-SM-5L3F2 20.4
GTEX-12WSH-0011-R5b-SM-5P9F3 20.2
GTEX-145MG-0011-R5b-SM-5S2VU 19.4
GTEX-S7PM-0011-R5A-SM-3NM8G 18.9
GTEX-13NZA-0011-R5b-SM-5KM4K 17.1
Show all

CAUDATE - FANTOM5 CAGE

Average Tags Per Million

100.9

FANTOM5 sample id

Sample description

Tags Per Million

Caudate nucleus
Tags Per Million: 100.9
FF:10164-103B2 76 years, female 116.2
FF:10379-105H1 89 years, female 85.5

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