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Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
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ANTIBODY INFORMATION VALIDATION SUMMARY IMMUNOCYTOCHEMISTRY IMMUNOHISTOCHEMISTRY WESTERN BLOT PROTEIN ARRAY ANTIGEN INFORMATION RELEVANT PUBLICATIONS

ANTIBODY INFORMATION

 
 

Antibody HPA040737

 

Antibody HPA040942

 

Provider

Atlas Antibodies
Sigma-Aldrich
  Atlas Antibodies
Sigma-Aldrich
 

Product name

HPA040737   HPA040942  

Host species

Rabbit   Rabbit  

Clonality

pAb   pAb  

Purity

Affinity purified using the PrEST-antigen as affinity ligand   Affinity purified using the PrEST-antigen as affinity ligand  

Other gene match

   

Released in version

9   9  

References

   

VALIDATION SUMMARY

 
 

Antibody HPA040737

 

Antibody HPA040942

 
Immunocytochemistry

Supported    
Immunohistochemistry

Uncertain   Uncertain  
Western blot

Supported   Uncertain  
Protein array

Supported   Supported  

IMMUNOCYTOCHEMISTRY

 
 

Antibody HPA040737

 

Antibody HPA040942

 

Standard validation

Supported    

   

Figure description

Immunofluorescent staining of human cell line U-2 OS shows localization to nucleoplasm & cytosol.    

Antibody dilution

1:200    

Literature conformity

The subcellular location is supported by literature.    

IMMUNOHISTOCHEMISTRY

 
 

Antibody HPA040737

 

Antibody HPA040942

 

Standard validation

Uncertain   Uncertain  

   

Figure description

Immunohistochemical staining of human lateral ventricle shows strong nuclear positivity in neuronal cells.   Immunohistochemical staining of human liver shows strong cytoplasmic and membranous positivity in hepatocytes.  

Expression

RNA: detected in 36 tissues
Protein: detected in 57 cell types
  RNA: detected in 36 tissues
Protein: detected in 56 cell types
 

Retrieval

HIER pH6   HIER pH6  

Antibody dilution

1:1000   1:60  

Literature conformity

Not consistent with gene/protein characterization data.   Consistent with gene/protein characterization data.  

RNA consistency

Mainly not consistent with RNA expression data.   Mainly consistent with RNA expression data.  

WESTERN BLOT

 
 

Antibody HPA040737

 

Antibody HPA040942

 

Standard validation

Supported

Analysis performed using a standard panel of samples.
Band of predicted size in kDa (+/-20%) with additional bands present.
  Uncertain

Analysis performed using a standard panel of samples.
No bands detected.
 

   

Figure description

Lane 1: Marker [kDa] 250, 130, 95, 72, 55, 36, 28, 17, 10
Lane 2: RT4
Lane 3: U-251 MG
Lane 4: Human Plasma
Lane 5: Liver
Lane 6: Tonsil
  Lane 1: Marker [kDa] 250, 130, 95, 72, 55, 36, 28, 17, 10
Lane 2: RT4
Lane 3: U-251 MG
Lane 4: Human Plasma
Lane 5: Liver
Lane 6: Tonsil
 

Target mass (kDa)

85.5, 84, 71.6, 62.9   85.5, 84, 71.6, 62.9  

Antibody dilution

1:250   1:250  

PROTEIN ARRAY

 
 

Antibody HPA040737

 

Antibody HPA040942

 

Standard validation

Supported

Pass with single peak corresponding to interaction only with its own antigen.
  Supported

Pass with single peak corresponding to interaction only with its own antigen.
 

   

Figure description

Antibody specificity analysis with protein arrays. Predicted and matching interactions are shown in green.   Antibody specificity analysis with protein arrays. Predicted and matching interactions are shown in green.  

Antibody dilution

1:3000   1:3000  

ANTIGEN INFORMATION

 
 

Antibody HPA040737

 

Antibody HPA040942

 

Antigen

Recombinant protein fragment   Recombinant protein fragment  

Length (aa)

87   89  

Antigen sequence

LEEIKAERKLRPVSPEEIRRSRLDVTTPESTKNLVESSMVNGGLTSQTKE
NGLSTSQQVPAQRKKLLRAPTLAELDSSESEEETLHK
 
LQRGESSMRSEKPSTAHHRPLRSIARFSSKSKSMDKSDEELQFPKELMED
WSTMEVCVDCKKFISEIISSSRRSLVLANKRARLKRKTQ
 

Matching transcripts

SPIRE1-002 - ENSP00000387226 [100%]
SPIRE1-005 - ENSP00000309661 [100%]
SPIRE1-010 - ENSP00000407050 [100%]
SPIRE1-201 - ENSP00000486927 [100%]
SPIRE1-001 - ENSP00000387266 [86%]
  SPIRE1-001 - ENSP00000387266 [100%]
SPIRE1-002 - ENSP00000387226 [100%]
SPIRE1-005 - ENSP00000309661 [100%]
SPIRE1-010 - ENSP00000407050 [100%]
SPIRE1-201 - ENSP00000486927 [100%]
 

Other gene match

   
ANTIGEN VIEW
SPIRE1-001
SPIRE1-002
SPIRE1-005
SPIRE1-010
SPIRE1-201
 

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The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.