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SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:29.6TPM
GTEx:10.1RPKM
FANTOM5:42.6Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:Low
Chondrocytes:Medium
Fibroblasts:Low
Peripheral nerve:Low
 
 

Antibody staining

Antibody HPA017936

  

Antibody HPA018950

  

Antibody HPA018954

  

Adipocytes

 High   Not detected   Not detected  

Chondrocytes

 High  

Fibroblasts

 High   Not detected   Not detected  

Peripheral nerve

 Low   Not detected  
        
     
     
     

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Low
Fibroblasts:Low
Peripheral nerve:Low
 
 
 

Antibody staining

Antibody HPA017936

  

Antibody HPA018950

  

Antibody HPA018954

  

Adipocytes

 Medium   Not detected   Not detected  

Fibroblasts

 Medium   Not detected   Not detected  

Peripheral nerve

 Low   Not detected  
        
        
     
     
     

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

29.6
N/A Female, age 80
Sample 1
TPM: 21.1
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45
Sample 2
TPM: 15.6
N/A Female, age 57
Sample 3
TPM: 12.7
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74
Sample 4
TPM: 71.7
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59
Sample 5
TPM: 26.7
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

10.1

GTEx sample id

RPKM
7.38.910.94.116.30510152025303540
 
7.38.910.94.116.30510152025303540

Adipose - Subcutaneous
Adipose - Subcutaneous
RPKM: 9.9
Samples: 350

Max RPKM: 40.9
Min RPKM: 4.1
Std RPKM: 4.2
Median RPKM: 8.9
GTEX-POYW-0726-SM-2XCEO 40.9
GTEX-OOBK-0226-SM-2YUMF 36.5
GTEX-QEG5-0326-SM-2S1PB 29.1
GTEX-ZYVF-0226-SM-5GIEG 27.5
GTEX-QDVJ-1826-SM-2S1P3 25.7
GTEX-XXEK-2426-SM-4BRUS 24.8
GTEX-U8XE-0426-SM-3DB91 23.3
GTEX-XYKS-2726-SM-4E3IC 22.2
Show all
7.38.911.64.517.10510152025303540455055
 
7.38.911.64.517.10510152025303540455055

Adipose - Visceral (Omentum)
Adipose - Visceral (Omentum)
RPKM: 10.6
Samples: 227

Max RPKM: 55.4
Min RPKM: 4.5
Std RPKM: 5.6
Median RPKM: 8.9
GTEX-13IVO-2426-SM-5K7V9 55.4
GTEX-ZAJG-1626-SM-5HL7I 30.4
GTEX-13PDP-1226-SM-5K7TW 30.0
GTEX-11WQK-1526-SM-5EGKN 28.4
GTEX-XXEK-1426-SM-4BRW1 26.8
GTEX-13PVQ-2226-SM-5L3G9 25.5
GTEX-XYKS-1826-SM-4E3JV 25.1
GTEX-ZYVF-1026-SM-5E44V 24.9
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

42.6

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 42.6
FF:10010-101C1 65,65,76 years, mixed 42.6

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.